Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000055-TA|BGIBMGA000055-PA|undefined
(209 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF440509-1|AAL34097.1| 194|Caenorhabditis elegans SKR-7 protein. 30 1.1
AC024790-7|AAF60641.1| 194|Caenorhabditis elegans Skp1 related ... 30 1.1
AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans hom... 30 1.4
U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical p... 29 2.4
AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical ... 29 2.4
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 29 3.2
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 29 3.2
AL132848-2|CAB60385.2| 333|Caenorhabditis elegans Hypothetical ... 28 5.6
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 27 7.4
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical pr... 27 7.4
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 27 7.4
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z66513-15|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 27 9.8
AF025451-9|AAB71206.2| 136|Caenorhabditis elegans Hypothetical ... 27 9.8
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 9.8
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 9.8
>Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical
protein T23G7.4 protein.
Length = 884
Score = 31.9 bits (69), Expect = 0.35
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 23 KRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVLNIDSNESTRMKQA 82
K NA++F AL N+ K+ KSK +AD + + D T++++ I + +
Sbjct: 230 KGENADHFAALKNISKLIKDSKSKAENVFADVLKRKDDADATRNALGVIVRFKFIFFLSS 289
Query: 83 KTDLHMKEIDEYIHVTN-CTKTAIANPDFDV 112
K + MK+ EYI + N T+ D DV
Sbjct: 290 KIEDSMKK-GEYITILNDYTRAKSLYADTDV 319
>AF440509-1|AAL34097.1| 194|Caenorhabditis elegans SKR-7 protein.
Length = 194
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 123 SFDGNQIFEVKNEVKAKENSLGNILGHLNSGEIIANPVAAFDVVTQTNDLGGL 175
S DG Q++E+ +E + N+L N++ +AN VA+ D + TN G +
Sbjct: 27 SSDG-QVYEISDEAVKQSNTLSNLI-----STCVANDVASMDPIPITNVTGNI 73
>AC024790-7|AAF60641.1| 194|Caenorhabditis elegans Skp1 related
(ubiquitin ligasecomplex component) protein 7 protein.
Length = 194
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 123 SFDGNQIFEVKNEVKAKENSLGNILGHLNSGEIIANPVAAFDVVTQTNDLGGL 175
S DG Q++E+ +E + N+L N++ +AN VA+ D + TN G +
Sbjct: 27 SSDG-QVYEISDEAVKQSNTLSNLI-----STCVANDVASMDPIPITNVTGNI 73
>AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans
homeobox protein 9 protein.
Length = 147
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 90 EIDEYIHVTNCTKTAIANPDFDVQDVGAEKFNLSFDGNQIFEVKNEVKAKE 140
EIDE+ + A +P Q +K +F G Q+FE++ + +AK+
Sbjct: 43 EIDEFGRCKSSLDQAKESPIEKCQKTKRKKARTTFSGKQVFELEKQFEAKK 93
>U50191-10|AAK31550.2| 1146|Caenorhabditis elegans Hypothetical
protein T14B4.1 protein.
Length = 1146
Score = 29.1 bits (62), Expect = 2.4
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
Query: 61 QDTTQSSVLNIDSNESTRMKQAKTDLHMKEIDEYIHVTNCTKTAIANPDFDVQDVGAEKF 120
++T ++++ +N + ++K D ++ + +K A P + +DVG E+
Sbjct: 901 EETIPNNIIMEMNNITHQIKSMNEDQEFLSAPSEVY-SALSKNASCAPSMENEDVGEEES 959
Query: 121 NLSFDGNQIFEVKNEVKAKENSLGNIL--GHLNSGEIIANPVAAFDVVTQTNDLGGLRNE 178
+ FD E A + I+ LN G I VA+ +V + N+LGG+
Sbjct: 960 PIEFD-----EQPENTNASTSFQRKIVKENELNDGGISLIVVAS--LVDKPNNLGGICRT 1012
Query: 179 KDSFKYEDINAKDDL 193
+ F + + D L
Sbjct: 1013 SEIFGVDTLVVADVL 1027
>AL132853-4|CAB60442.1| 1293|Caenorhabditis elegans Hypothetical
protein Y80D3A.8 protein.
Length = 1293
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 150 LNSGEIIANPVAAFDVVTQTNDLGGLRNEKDSFKYEDINAKDDLGNEVHS 199
+N+ E +++ + AFD TQT DL L + +F E +N D+ NE S
Sbjct: 432 MNNVETVSDWLTAFDNFTQTLDLDQLEKDVAAF-VESLNF-TDINNETQS 479
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 111 DVQDVGAEKFNLSFDGNQIFEVKNEVKAKENSLGNILGHLNSGEII 156
D+ +G E NL + +++ ++KN + +N L N + LNS +I
Sbjct: 328 DLTGMGREVENLIKENSELLDMKNALNIVKNDLINQVDELNSENMI 373
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 111 DVQDVGAEKFNLSFDGNQIFEVKNEVKAKENSLGNILGHLNSGEII 156
D+ +G E NL + +++ ++KN + +N L N + LNS +I
Sbjct: 328 DLTGMGREVENLIKENSELLDMKNALNIVKNDLINQVDELNSENMI 373
>AL132848-2|CAB60385.2| 333|Caenorhabditis elegans Hypothetical
protein Y47H10A.3 protein.
Length = 333
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 79 MKQAKTDLHMKEIDEYIHVTNCTKTAIANPDF 110
+ K +L M+ + +Y+H TNC T PDF
Sbjct: 53 LDSGKGELMMESLLDYVHQTNCLTT--VKPDF 82
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 7.4
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 59 NKQDTTQSSVLNIDSNESTRMKQAKTDLHMKE-IDEYIHVTNCTKTAIANPDFDVQDVGA 117
++++ + + ++ S E Q K +++ +D+ K A A+ D + V
Sbjct: 1007 HQEEINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEG 1066
Query: 118 E----KFNLSFDGNQIFEVKNEVKAKENSLGNILGHLNSGEIIANPV--AAFDVVTQTND 171
E + N+ G Q +++N +K KE+ L ++ L + + + + D ++ ++
Sbjct: 1067 ELKIAQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISE 1126
Query: 172 L-GGLRNEKDSFKYEDINAKDDLGNEV 197
L L NE+ S D AK DL E+
Sbjct: 1127 LEEELENERQSRSKAD-RAKSDLQREL 1152
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 7.4
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 59 NKQDTTQSSVLNIDSNESTRMKQAKTDLHMKE-IDEYIHVTNCTKTAIANPDFDVQDVGA 117
++++ + + ++ S E Q K +++ +D+ K A A+ D + V
Sbjct: 1007 HQEEINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEG 1066
Query: 118 E----KFNLSFDGNQIFEVKNEVKAKENSLGNILGHLNSGEIIANPV--AAFDVVTQTND 171
E + N+ G Q +++N +K KE+ L ++ L + + + + D ++ ++
Sbjct: 1067 ELKIAQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISE 1126
Query: 172 L-GGLRNEKDSFKYEDINAKDDLGNEV 197
L L NE+ S D AK DL E+
Sbjct: 1127 LEEELENERQSRSKAD-RAKSDLQREL 1152
>Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical
protein T27A8.5 protein.
Length = 567
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)
Query: 141 NSLGNILGHLNSGEIIAN-PVAAFDVVTQTNDLGGLRNEKDSFKYEDINAKDDL 193
N G +LGH+N I AN PVA F + +R DS E + +++L
Sbjct: 23 NLCGKVLGHINRCNICANAPVATF---IRIGGFSQIRELVDSHLNEILQIREEL 73
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.5 bits (58), Expect = 7.4
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 59 NKQDTTQSSVLNIDSNESTRMKQAKTDLHMKE-IDEYIHVTNCTKTAIANPDFDVQDVGA 117
++++ + + ++ S E Q K +++ +D+ K A A+ D + V
Sbjct: 1010 HQEEINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEG 1069
Query: 118 E----KFNLSFDGNQIFEVKNEVKAKENSLGNILGHLNSGEIIANPV--AAFDVVTQTND 171
E + N+ G Q +++N +K KE+ L ++ L + + + + D ++ ++
Sbjct: 1070 ELKIAQENIDESGRQRHDLENNLKKKESELHSVSSRLEDEQALVSKLQRQIKDGQSRISE 1129
Query: 172 L-GGLRNEKDSFKYEDINAKDDLGNEV 197
L L NE+ S D AK DL E+
Sbjct: 1130 LEEELENERQSRSKAD-RAKSDLQREL 1155
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 27.1 bits (57), Expect = 9.8
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 49 RTYADQILLSNKQDTTQSSVLNIDSNESTRMKQAKTDLHMKEIDEYIHVTNCTKTAIANP 108
R Y DQI L+ K+ Q ++ + E + + A+T++ K+I E+ IA
Sbjct: 271 RDYNDQIELTLKKQEAQKTLQDETKKEYAKNRAARTEVE-KKIQEFRDEVEVQDAEIAEA 329
Query: 109 DFDVQDVGAEKFNLSFDGNQIFEVKNEVKAK 139
+D+ A+K + +I E + ++ K
Sbjct: 330 R---EDLDAKKRKVLEFEEKIRECEQSIRKK 357
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 103 TAIANPDFDVQDVGAEKFNLSFDGNQIFEVKNEVKAKENSLGNILGHLNSGEIIAN 158
TAIAN VGA + N I E+ + +ENS GN+ G ++ +I+ N
Sbjct: 2155 TAIANIS-SATIVGARLARNKKEFNDINEITKMLNDEENSFGNVFG--DAQDILTN 2207
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 103 TAIANPDFDVQDVGAEKFNLSFDGNQIFEVKNEVKAKENSLGNILGHLNSGEIIAN 158
TAIAN VGA + N I E+ + +ENS GN+ G ++ +I+ N
Sbjct: 2155 TAIANIS-SATIVGARLARNKKEFNDINEITKMLNDEENSFGNVFG--DAQDILTN 2207
>Z66513-15|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 27.1 bits (57), Expect = 9.8
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 49 RTYADQILLSNKQDTTQSSVLNIDSNESTRMKQAKTDLHMKEIDEYIHVTNCTKTAIANP 108
R Y DQI L+ K+ Q ++ + E + + A+T++ K+I E+ IA
Sbjct: 271 RDYNDQIELTLKKQEAQKTLQDETKKEYAKNRAARTEVE-KKIQEFRDEVEVQDAEIAEA 329
Query: 109 DFDVQDVGAEKFNLSFDGNQIFEVKNEVKAK 139
+D+ A+K + +I E + ++ K
Sbjct: 330 R---EDLDAKKRKVLEFEEKIRECEQSIRKK 357
>AF025451-9|AAB71206.2| 136|Caenorhabditis elegans Hypothetical
protein C24H12.10 protein.
Length = 136
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 20 HRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQD 62
HR+K N E FN +I + LK KIF Y I++ ++D
Sbjct: 65 HRLKLVNREIFNVIIEWHADFSLK--KIFPYYQRIIVMETERD 105
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 103 TAIANPDFDVQDVGAEKFNLSFDGNQIFEVKNEVKAKENSLGNILGHLNSGEIIAN 158
TAIAN VGA + N I E+ + +ENS GN+ G ++ +I+ N
Sbjct: 2155 TAIANIS-SATIVGARLARNKKEFNDINEITKMLNDEENSFGNVFG--DAQDILTN 2207
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.1 bits (57), Expect = 9.8
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 103 TAIANPDFDVQDVGAEKFNLSFDGNQIFEVKNEVKAKENSLGNILGHLNSGEIIAN 158
TAIAN VGA + N I E+ + +ENS GN+ G ++ +I+ N
Sbjct: 2155 TAIANIS-SATIVGARLARNKKEFNDINEITKMLNDEENSFGNVFG--DAQDILTN 2207
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.131 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,013,954
Number of Sequences: 27539
Number of extensions: 205319
Number of successful extensions: 457
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 453
Number of HSP's gapped (non-prelim): 20
length of query: 209
length of database: 12,573,161
effective HSP length: 78
effective length of query: 131
effective length of database: 10,425,119
effective search space: 1365690589
effective search space used: 1365690589
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 57 (27.1 bits)
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