Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000055-TA|BGIBMGA000055-PA|undefined
(209 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB102801-1|BAD89392.1| 203|Homo sapiens IL6ST nirs variant 3 pr... 33 0.95
AL445483-5|CAI17055.1| 580|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 32 1.7
DQ270159-1|ABB76684.1| 604|Homo sapiens mitochondrial A kinase ... 30 5.1
Z98880-3|CAI42375.1| 2341|Homo sapiens v-ros UR2 sarcoma virus o... 30 6.7
Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus o... 30 6.7
M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein. 30 6.7
AL132671-5|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus... 30 6.7
AL132671-4|CAI23379.1| 2341|Homo sapiens v-ros UR2 sarcoma virus... 30 6.7
>AB102801-1|BAD89392.1| 203|Homo sapiens IL6ST nirs variant 3
protein.
Length = 203
Score = 32.7 bits (71), Expect = 0.95
Identities = 33/104 (31%), Positives = 44/104 (42%), Gaps = 8/104 (7%)
Query: 1 MHYGFWAVAVLL--LSENASGHRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLS 58
+H F AV VL L N H + N+E ++++ L NP KS I Y I
Sbjct: 40 LHSNFTAVCVLKEKLKPNPP-HNLSVINSEELSSILKLTWTNPSIKSVIILKY--NIQYR 96
Query: 59 NKQDTTQSSVLNIDSNESTRMKQAKTDLHMKEIDEYIHVTNCTK 102
K +T S + D+ STR DL K EY+ C K
Sbjct: 97 TKDASTWSQIPPEDT-ASTRSSFTVQDL--KPFTEYVFRIRCMK 137
>AL445483-5|CAI17055.1| 580|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59 protein.
Length = 580
Score = 31.9 bits (69), Expect = 1.7
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 91 IDEYIHVTNCTKTAIANPDFDVQDVGAEKFNLSFDGNQIFEVKNEVKAK 139
+DEY+H N K+ NP QDV + L + G +E N++K K
Sbjct: 526 MDEYVHQENTYKSTWRNPQHFQQDV---RMTLGYVGKAQWEEDNQLKVK 571
>DQ270159-1|ABB76684.1| 604|Homo sapiens mitochondrial A kinase
PPKA anchor protein 10 protein.
Length = 604
Score = 30.3 bits (65), Expect = 5.1
Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 13 LSENASGHRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVL--- 69
L+E AS + T A ++ ++ +++F T+++ I L+N+ ++TQ+ +L
Sbjct: 182 LAEPASPSKKHETTASFLTDSLDK-RLEDSGSAQLFMTHSEGIDLNNRTNSTQNHLLLSQ 240
Query: 70 NIDSNESTRMKQAKTDLHMKEID 92
DS S R++ A+ H ++
Sbjct: 241 ECDSAHSLRLEMARAGTHQVSME 263
>Z98880-3|CAI42375.1| 2341|Homo sapiens v-ros UR2 sarcoma virus
oncogene homolog 1 (avian) protein.
Length = 2341
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 10 VLLLSENASGHRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVL 69
++ ++ ++ K+ N + + L + L S + + + D+ LS DT + ++L
Sbjct: 1392 IITAKDSTQIYQAKKGNGAIVSQVKALRSRHILAYSSVMQPFPDKAFLSLASDTVEPTIL 1451
Query: 70 NIDSNEST-RMKQAKTDL 86
N + T R+ AKT+L
Sbjct: 1452 NATNTSLTIRLPLAKTNL 1469
>Z98880-2|CAI42374.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
oncogene homolog 1 (avian) protein.
Length = 2347
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 10 VLLLSENASGHRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVL 69
++ ++ ++ K+ N + + L + L S + + + D+ LS DT + ++L
Sbjct: 1398 IITAKDSTQIYQAKKGNGAIVSQVKALRSRHILAYSSVMQPFPDKAFLSLASDTVEPTIL 1457
Query: 70 NIDSNEST-RMKQAKTDL 86
N + T R+ AKT+L
Sbjct: 1458 NATNTSLTIRLPLAKTNL 1475
>M34353-1|AAA60278.1| 2347|Homo sapiens ROS1 protein.
Length = 2347
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 10 VLLLSENASGHRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVL 69
++ ++ ++ K+ N + + L + L S + + + D+ LS DT + ++L
Sbjct: 1398 IITAKDSTQIYQAKKGNGAIVSQVKALRSRHILAYSSVMQPFPDKAFLSLASDTVEPTIL 1457
Query: 70 NIDSNEST-RMKQAKTDL 86
N + T R+ AKT+L
Sbjct: 1458 NATNTSLTIRLPLAKTNL 1475
>AL132671-5|CAI23378.1| 2347|Homo sapiens v-ros UR2 sarcoma virus
oncogene homolog 1 (avian) protein.
Length = 2347
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 10 VLLLSENASGHRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVL 69
++ ++ ++ K+ N + + L + L S + + + D+ LS DT + ++L
Sbjct: 1398 IITAKDSTQIYQAKKGNGAIVSQVKALRSRHILAYSSVMQPFPDKAFLSLASDTVEPTIL 1457
Query: 70 NIDSNEST-RMKQAKTDL 86
N + T R+ AKT+L
Sbjct: 1458 NATNTSLTIRLPLAKTNL 1475
>AL132671-4|CAI23379.1| 2341|Homo sapiens v-ros UR2 sarcoma virus
oncogene homolog 1 (avian) protein.
Length = 2341
Score = 29.9 bits (64), Expect = 6.7
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 10 VLLLSENASGHRVKRTNAENFNALINLYKINPLKKSKIFRTYADQILLSNKQDTTQSSVL 69
++ ++ ++ K+ N + + L + L S + + + D+ LS DT + ++L
Sbjct: 1392 IITAKDSTQIYQAKKGNGAIVSQVKALRSRHILAYSSVMQPFPDKAFLSLASDTVEPTIL 1451
Query: 70 NIDSNEST-RMKQAKTDL 86
N + T R+ AKT+L
Sbjct: 1452 NATNTSLTIRLPLAKTNL 1469
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.314 0.131 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,117,454
Number of Sequences: 224733
Number of extensions: 948948
Number of successful extensions: 1748
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1748
Number of HSP's gapped (non-prelim): 8
length of query: 209
length of database: 73,234,838
effective HSP length: 87
effective length of query: 122
effective length of database: 53,683,067
effective search space: 6549334174
effective search space used: 6549334174
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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