GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000054-TA|BGIBMGA000054-PA|IPR012464|Protein of unknown
function DUF1676
         (588 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118624-1|AAM49993.1|  648|Drosophila melanogaster RE22492p pro...   119   1e-26
AE014297-435|AAF51890.3|  648|Drosophila melanogaster CG15598-PA...   119   1e-26
AY119131-1|AAM50991.1|  533|Drosophila melanogaster RE35182p pro...    89   1e-17
AE014297-412|AAF51908.3|  533|Drosophila melanogaster CG15589-PA...    89   1e-17
AY118713-1|AAM50573.1|  719|Drosophila melanogaster AT25933p pro...    31   3.4  
AE014297-3540|AAF56293.1|  390|Drosophila melanogaster CG18669-P...    31   4.4  
AE014298-1445|AAN09259.1|  719|Drosophila melanogaster CG32686-P...    31   5.9  
AE014298-1444|AAN09258.1| 1082|Drosophila melanogaster CG32686-P...    31   5.9  

>AY118624-1|AAM49993.1|  648|Drosophila melanogaster RE22492p
           protein.
          Length = 648

 Score =  119 bits (287), Expect = 1e-26
 Identities = 85/303 (28%), Positives = 123/303 (40%), Gaps = 27/303 (8%)

Query: 48  FRTGHQLWDNVLNQCTAEPSVSCLQKNFFWYLDDRFRMNNDLKVSDSVCFKRNNVDLDRV 107
           F +G++LWD ++  C  +P VSC QKN F YLD+   +  D+ V+  + F +N VD    
Sbjct: 149 FASGNELWDGLVRDCYLKPDVSCFQKNVFSYLDNVLDVQ-DVNVTQRLKFFKNQVDYQVD 207

Query: 108 SADDGVNGARSAXXXXXXXXXXXXXXXXXTNGLYDKGVNFFMTHDMTLTLPEYFFQGATL 167
              +  + AR+A                 T+ LY K + F MTHD+ + LPE  F GAT 
Sbjct: 208 KEKEEHSEARAASAETPIEEV--------TSALYGKSIKFAMTHDLEVDLPEVMFNGATF 259

Query: 168 KIAPRALTKSGALIHVDLEPRENKNGE--GRIFLQXXXXXXXXXXXXXXXXXXXXXXXXX 225
           +I+PRA+  +G +  ++L P++       G I  +                         
Sbjct: 260 RISPRAIEGNGIIAKLELIPKQVVKARLAGAIIQKKIQKFLRSKLVLSFLALLLIIKIIK 319

Query: 226 XXXXXXXPLILGVTTAXXXXXXXXXXXXPALSHIFKLCSWXXXXXXXXXXXXXXXXXXXX 285
                  P+++GV  A            PALSH+FKLCS                     
Sbjct: 320 IKLFWLLPIVIGVGAAKKLLLKFLLFLFPALSHLFKLCSHYQQSYHAPAKYHHHHHLIDH 379

Query: 286 XKVPHAP------------VYGHQTHGSVLVKNHG----QNSAPGFEHYPQDWELSGPGL 329
                 P            +Y H   G      HG    ++  PGFEH+   WE SGPGL
Sbjct: 380 HHTVVPPWHSGEHHSVPEIIYTHPPKGHPSAYLHGAPVHESYGPGFEHFEGAWENSGPGL 439

Query: 330 GSE 332
           GS+
Sbjct: 440 GSD 442



 Score =  117 bits (282), Expect = 4e-26
 Identities = 58/137 (42%), Positives = 88/137 (64%), Gaps = 8/137 (5%)

Query: 455 AVKLKETNRVQTETDLVKQQQQILA----ANDPDTIAA---EKFYGFLLDRVDAVLATIG 507
           A +LKE  R+QTE  L++QQQ+IL       D   +     + FY  +L ++D ++  +G
Sbjct: 509 AAQLKEAIRIQTEQRLIQQQQKILEHQPFVQDGQPLYPLNYDPFYSPILLKIDKIIEQLG 568

Query: 508 ASETGCKERAVCTLYGDPFKHAPFSNLVSNELSKDSNELLPAADSKQAL-RYYRYVQAAR 566
                CKER VC++Y DP  ++P SN +S ELS+D++EL P   + +A+ R+YR +QAAR
Sbjct: 569 VKNDLCKERIVCSMYKDPATYSPHSNFISAELSRDTSELEPVTHANEAVRRFYRLIQAAR 628

Query: 567 DGQEQKDCNTEYPHCDI 583
           DGQ+QKDC + YP C++
Sbjct: 629 DGQDQKDCQSLYPQCNM 645


>AE014297-435|AAF51890.3|  648|Drosophila melanogaster CG15598-PA
           protein.
          Length = 648

 Score =  119 bits (287), Expect = 1e-26
 Identities = 85/303 (28%), Positives = 123/303 (40%), Gaps = 27/303 (8%)

Query: 48  FRTGHQLWDNVLNQCTAEPSVSCLQKNFFWYLDDRFRMNNDLKVSDSVCFKRNNVDLDRV 107
           F +G++LWD ++  C  +P VSC QKN F YLD+   +  D+ V+  + F +N VD    
Sbjct: 149 FASGNELWDGLVRDCYLKPDVSCFQKNVFSYLDNVLDVQ-DVNVTQRLKFFKNQVDYQVD 207

Query: 108 SADDGVNGARSAXXXXXXXXXXXXXXXXXTNGLYDKGVNFFMTHDMTLTLPEYFFQGATL 167
              +  + AR+A                 T+ LY K + F MTHD+ + LPE  F GAT 
Sbjct: 208 KEKEEHSEARAASAETPIEEV--------TSALYGKSIKFAMTHDLEVDLPEVMFNGATF 259

Query: 168 KIAPRALTKSGALIHVDLEPRENKNGE--GRIFLQXXXXXXXXXXXXXXXXXXXXXXXXX 225
           +I+PRA+  +G +  ++L P++       G I  +                         
Sbjct: 260 RISPRAIEGNGIIAKLELIPKQVVKARLAGAIIQKKIQKFLRSKLVLSFLALLLIIKIIK 319

Query: 226 XXXXXXXPLILGVTTAXXXXXXXXXXXXPALSHIFKLCSWXXXXXXXXXXXXXXXXXXXX 285
                  P+++GV  A            PALSH+FKLCS                     
Sbjct: 320 IKLFWLLPIVIGVGAAKKLLLKFLLFLFPALSHLFKLCSHYQQSYHAPAKYHHHHHLIDH 379

Query: 286 XKVPHAP------------VYGHQTHGSVLVKNHG----QNSAPGFEHYPQDWELSGPGL 329
                 P            +Y H   G      HG    ++  PGFEH+   WE SGPGL
Sbjct: 380 HHTVVPPWHSGEHHSVPEIIYTHPPKGHPSAYLHGAPVHESYGPGFEHFEGAWENSGPGL 439

Query: 330 GSE 332
           GS+
Sbjct: 440 GSD 442



 Score =  117 bits (282), Expect = 4e-26
 Identities = 58/137 (42%), Positives = 88/137 (64%), Gaps = 8/137 (5%)

Query: 455 AVKLKETNRVQTETDLVKQQQQILA----ANDPDTIAA---EKFYGFLLDRVDAVLATIG 507
           A +LKE  R+QTE  L++QQQ+IL       D   +     + FY  +L ++D ++  +G
Sbjct: 509 AAQLKEAIRIQTEQRLIQQQQKILEHQPFVQDGQPLYPLNYDPFYSPILLKIDKIIEQLG 568

Query: 508 ASETGCKERAVCTLYGDPFKHAPFSNLVSNELSKDSNELLPAADSKQAL-RYYRYVQAAR 566
                CKER VC++Y DP  ++P SN +S ELS+D++EL P   + +A+ R+YR +QAAR
Sbjct: 569 VKNDLCKERIVCSMYKDPATYSPHSNFISAELSRDTSELEPVTHANEAVRRFYRLIQAAR 628

Query: 567 DGQEQKDCNTEYPHCDI 583
           DGQ+QKDC + YP C++
Sbjct: 629 DGQDQKDCQSLYPQCNM 645


>AY119131-1|AAM50991.1|  533|Drosophila melanogaster RE35182p
           protein.
          Length = 533

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 39/96 (40%), Positives = 64/96 (66%), Gaps = 3/96 (3%)

Query: 489 EKFYGFLLDRVDAVLATI--GASETGCKERAVCTLYGDPFKHAPFSNLVSNELSKDSNEL 546
           + FY  LL R+D+V A +        C+E+ +C +Y +P K+AP+SNLVS +LS++ NEL
Sbjct: 410 DPFYSPLLSRLDSVFAQLKLNPENEACREKLICLMYANPAKYAPYSNLVSAQLSRELNEL 469

Query: 547 -LPAADSKQALRYYRYVQAARDGQEQKDCNTEYPHC 581
             P +D+   LR+++Y++AA+DGQ+  DC+  +  C
Sbjct: 470 RKPTSDNPDILRFFKYMRAAKDGQDGVDCDESFAKC 505


>AE014297-412|AAF51908.3|  533|Drosophila melanogaster CG15589-PA
           protein.
          Length = 533

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 39/96 (40%), Positives = 64/96 (66%), Gaps = 3/96 (3%)

Query: 489 EKFYGFLLDRVDAVLATI--GASETGCKERAVCTLYGDPFKHAPFSNLVSNELSKDSNEL 546
           + FY  LL R+D+V A +        C+E+ +C +Y +P K+AP+SNLVS +LS++ NEL
Sbjct: 410 DPFYSPLLSRLDSVFAQLKLNPENEACREKLICLMYANPAKYAPYSNLVSAQLSRELNEL 469

Query: 547 -LPAADSKQALRYYRYVQAARDGQEQKDCNTEYPHC 581
             P +D+   LR+++Y++AA+DGQ+  DC+  +  C
Sbjct: 470 RKPTSDNPDILRFFKYMRAAKDGQDGVDCDESFAKC 505


>AY118713-1|AAM50573.1|  719|Drosophila melanogaster AT25933p
           protein.
          Length = 719

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 345 SFKPHVNDANDINAWGLGLPPGQSMN-VGEYSSSNLMPKVVAPNIPQKVPLANIGNVAR 402
           S  P++ ++  ++ +    PP  S+N   + S+S  +PKV+ P  PQK     +G + R
Sbjct: 307 SRNPYIEESKTLSRFPARRPPSVSVNRPSQPSTSTGIPKVLPPPEPQKPESPIVGKIIR 365


>AE014297-3540|AAF56293.1|  390|Drosophila melanogaster CG18669-PA
           protein.
          Length = 390

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 493 GFLLDRVDAVLATIGASETGCKERAVCTLYGDPFKHAPFSNLVSNELSKDSNELLPAADS 552
           G L + ++ +L   G  E+ C  R+VC L   PFK    +N+++  L+      L  A +
Sbjct: 290 GELYESLENMLIQYGFDES-CLLRSVCELARHPFKDVE-NNMLTALLTFTLTPSLHEAFA 347

Query: 553 KQALRYYR-YVQAARDGQEQKDCNTEYPHCDIDY 585
                Y   Y  A + G    DC   Y +C +D+
Sbjct: 348 PGENVYREVYEHAEQQGFLGMDCGHLYSNCPVDF 381


>AE014298-1445|AAN09259.1|  719|Drosophila melanogaster CG32686-PA,
           isoform A protein.
          Length = 719

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 345 SFKPHVNDANDINAWGLGLPPGQSMN-VGEYSSSNLMPKVVAPNIPQKVPLANIGNVAR 402
           S  P++ ++  ++ +    PP  S+N   + S+S  +PKV+ P  PQK     +G + R
Sbjct: 307 SRNPYIEESKTLSRFPARRPPSVSVNRPRQPSTSTGIPKVLPPPEPQKPESPIVGKIIR 365


>AE014298-1444|AAN09258.1| 1082|Drosophila melanogaster CG32686-PB,
           isoform B protein.
          Length = 1082

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 345 SFKPHVNDANDINAWGLGLPPGQSMN-VGEYSSSNLMPKVVAPNIPQKVPLANIGNVAR 402
           S  P++ ++  ++ +    PP  S+N   + S+S  +PKV+ P  PQK     +G + R
Sbjct: 670 SRNPYIEESKTLSRFPARRPPSVSVNRPRQPSTSTGIPKVLPPPEPQKPESPIVGKIIR 728


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.134    0.405 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,113,288
Number of Sequences: 52641
Number of extensions: 1078877
Number of successful extensions: 2360
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2342
Number of HSP's gapped (non-prelim): 14
length of query: 588
length of database: 24,830,863
effective HSP length: 89
effective length of query: 499
effective length of database: 20,145,814
effective search space: 10052761186
effective search space used: 10052761186
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 65 (30.3 bits)