Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000054-TA|BGIBMGA000054-PA|IPR012464|Protein of unknown
function DUF1676
(588 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical pr... 33 0.56
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 33 0.56
Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonin... 31 3.0
AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical ... 31 3.0
U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical pr... 29 6.9
U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical pr... 29 9.2
>Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical
protein T04A8.7b protein.
Length = 606
Score = 33.1 bits (72), Expect = 0.56
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 3 KVIAVTTLVLLSTGRTDAESAYKTGLRLVEKLSGGYFNDVYRNGTFRTGHQLWDNVLNQC 62
K ++ +LL + A + GL + +GGYF+D R H LWD+ L
Sbjct: 181 KAHSLGIFMLLDVVHSHASKNVEDGLNQWDGSNGGYFHD-----NARGYHNLWDSRLFDY 235
Query: 63 TAEPSVSCLQKNFFWYLDD 81
T ++ L N W++++
Sbjct: 236 TQTETLRFLLSNVRWWVEE 254
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 33.1 bits (72), Expect = 0.56
Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 3 KVIAVTTLVLLSTGRTDAESAYKTGLRLVEKLSGGYFNDVYRNGTFRTGHQLWDNVLNQC 62
K ++ +LL + A + GL + +GGYF+D R H LWD+ L
Sbjct: 256 KAHSLGIFMLLDVVHSHASKNVEDGLNQWDGSNGGYFHD-----NARGYHNLWDSRLFDY 310
Query: 63 TAEPSVSCLQKNFFWYLDD 81
T ++ L N W++++
Sbjct: 311 TQTETLRFLLSNVRWWVEE 329
>Z81096-8|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 454 SAVKLKETNRVQTETDLVKQQQQILAANDPDTIAAEKFYGFLLDRVDAV 502
SAV++ E +VQ + ++++ IL A D I G L +D V
Sbjct: 559 SAVRINEVQKVQIKMGNLEERSAILKAKDEKLIGQRSLLGLLSSPIDCV 607
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical
protein B0365.7 protein.
Length = 2769
Score = 30.7 bits (66), Expect = 3.0
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 454 SAVKLKETNRVQTETDLVKQQQQILAANDPDTIAAEKFYGFLLDRVDAV 502
SAV++ E +VQ + ++++ IL A D I G L +D V
Sbjct: 559 SAVRINEVQKVQIKMGNLEERSAILKAKDEKLIGQRSLLGLLSSPIDCV 607
>Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 856
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 344 ASFKPHVNDANDINAWGLGLPPG-QSMNVGEYSSSNLMPKVVAPNIPQKVPLANIGNVAR 402
+S KP N+AN + + P Q M + SNL P IP+ ANI + R
Sbjct: 482 SSTKPSPNNANRVRRSTITSPADTQDMVAADQMLSNLDPTTTTTTIPKSATTANIQGIPR 541
>AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical
protein Y60A3A.1 protein.
Length = 856
Score = 30.7 bits (66), Expect = 3.0
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 344 ASFKPHVNDANDINAWGLGLPPG-QSMNVGEYSSSNLMPKVVAPNIPQKVPLANIGNVAR 402
+S KP N+AN + + P Q M + SNL P IP+ ANI + R
Sbjct: 482 SSTKPSPNNANRVRRSTITSPADTQDMVAADQMLSNLDPTTTTTTIPKSATTANIQGIPR 541
>U61947-2|AAB03135.1| 498|Caenorhabditis elegans Hypothetical
protein C06G3.6 protein.
Length = 498
Score = 29.5 bits (63), Expect = 6.9
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 5/122 (4%)
Query: 452 RVSAVKLKETNRVQTETDLVKQQQQILAANDPDTIAAEKFYGFLLDRVDAVLATIGASET 511
R ++ KE RV+ ET L+KQ++QI +TI E F DR + + + +
Sbjct: 371 RQEFIREKEKFRVEKET-LMKQKEQIEEMMKQETINFETNRAFFSDRFEPIFNKV---KD 426
Query: 512 GCKERAVCTLYGDPFKHAPFSNLVSNELSKDSNELLPAADSKQALRYYRYVQAARDGQEQ 571
G K T + F+ + + D + L A+ + + Y + D QE+
Sbjct: 427 GKKSEDDTTRKVE-FEVETAESNYPGSIFSDEDSLSDLAEILKDIEEYECSSESSDDQEK 485
Query: 572 KD 573
D
Sbjct: 486 DD 487
>U42833-2|AAA83576.1| 1276|Caenorhabditis elegans Hypothetical protein
ZK430.5 protein.
Length = 1276
Score = 29.1 bits (62), Expect = 9.2
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 456 VKLKETNRVQTETDLVKQQQQILAANDPDTIAAE 489
+KLKET ++Q ET +Q+ LA+N T+ +E
Sbjct: 1162 IKLKETTKIQKETVSKTPKQKSLASNQILTLRSE 1195
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.134 0.405
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,936,898
Number of Sequences: 27539
Number of extensions: 530832
Number of successful extensions: 1040
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1035
Number of HSP's gapped (non-prelim): 8
length of query: 588
length of database: 12,573,161
effective HSP length: 85
effective length of query: 503
effective length of database: 10,232,346
effective search space: 5146870038
effective search space used: 5146870038
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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