Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000053-TA|BGIBMGA000053-PA|IPR012464|Protein of unknown
function DUF1676
(493 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 34 0.30
04_03_0913 + 20777859-20780309 33 0.39
12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730 33 0.68
06_03_1344 - 29472139-29473292,29474478-29475386,29475504-294756... 32 0.91
01_07_0266 - 42406026-42406146,42406682-42406841,42407131-424072... 32 0.91
03_06_0086 + 31544761-31544961,31546036-31546201,31546568-315466... 30 3.7
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682... 30 3.7
11_08_0040 + 27891797-27891823,27891934-27892091,27892169-278924... 30 4.8
06_03_0749 + 24133302-24134274,24134585-24135272,24135751-241358... 30 4.8
06_03_0928 + 26024589-26024645,26024900-26024956,26025464-260257... 29 6.4
04_03_0091 - 11043023-11043090,11043458-11043566,11044431-110445... 29 8.4
02_01_0335 + 2386902-2386906,2386976-2387282,2387664-2387777,239... 29 8.4
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 33.9 bits (74), Expect = 0.30
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 260 RINGKTTNANEIIKENGMKEIKHRLAKRNVDALE---------IVAGKKEIAEDISSEIP 310
++N ++ +E ++E+ M E KH +K D LE + +G + + ED+ E
Sbjct: 494 KLNLDRSSGDESMEEDAM-ETKHMDSKTIPDYLEGKSEVTLEHVSSGDESMEEDVM-ETK 551
Query: 311 GTDDREKLTHVNRFDNDIVEDI--TLDNDSNWKTSILIGK 348
D K+ HV+ D + ED+ T DSN K L GK
Sbjct: 552 HVDSNTKVEHVSSGDESMEEDVMETKHVDSNTKPDYLEGK 591
>04_03_0913 + 20777859-20780309
Length = 816
Score = 33.5 bits (73), Expect = 0.39
Identities = 21/68 (30%), Positives = 35/68 (51%)
Query: 7 AHYNAMDLKTTLVLFAVVSTTSSQLKSPDRIFESAYSECLMKFSYVCLQRKTLSYLKVLN 66
A + + L L L ++ S S DR+ +S + ++ F Y+ LQR T ++++ L
Sbjct: 451 AIFASFALLCLLPLILLLVRRSKTKFSGDRLKDSQFCNGIISFEYIDLQRATTNFMERLG 510
Query: 67 GLSEVSVF 74
G S SVF
Sbjct: 511 GGSFGSVF 518
>12_01_0907 + 8818357-8819033,8819077-8821352,8821465-8821730
Length = 1072
Score = 32.7 bits (71), Expect = 0.68
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 8/132 (6%)
Query: 267 NANEIIKENGMKEIKHRLAKRNVDALEIVAGKKEIAEDISSEIPGTDDREKLTHVNRFDN 326
NA ++ + +G+ + R A+ VD EIAED EIP D + +T + +
Sbjct: 460 NAAKMKQLDGVDCPRKRKAEGFVDGDSGKRRHLEIAEDPEDEIPLIDRQNSITMMVNGSS 519
Query: 327 DIVEDITLDNDS--NWKTSILIGKLLKKS---AVNELKTERNSRNGDASTDDNVKCNTQY 381
+ VE + + DS +W + G L KS A+++ + + G+ D+V +
Sbjct: 520 NHVEIVGIGKDSMASWARNGGNGSPLHKSTQQALSDAEAVLETTVGEDEASDHVIAEDKK 579
Query: 382 NP---DGKPAVC 390
N DG+ VC
Sbjct: 580 NSNTGDGESEVC 591
>06_03_1344 -
29472139-29473292,29474478-29475386,29475504-29475618,
29476017-29476218,29477177-29477296,29477431-29477582,
29478177-29478461
Length = 978
Score = 32.3 bits (70), Expect = 0.91
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 359 KTERNSRNGDASTDDNVKCNTQYNPDGKPAVCREYRRKKRDIIDIFQNS 407
K +RN ++S+D V +T+ +P RE+R+KKRD+ + + +S
Sbjct: 404 KKKRNITESESSSDSEVDIDTRKHPK------REHRKKKRDVTESYSSS 446
>01_07_0266 -
42406026-42406146,42406682-42406841,42407131-42407252,
42407355-42407467,42407844-42407964,42408030-42408144,
42408695-42408833
Length = 296
Score = 32.3 bits (70), Expect = 0.91
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 47 MKFSYVCLQRKTLSYLKVLNGLSEVSVFGDYVKFVKFNSSKLEEDKPPVNTTDTAQLASL 106
+K + C Q + S+ G++ V+ FG +K N + L D+ P+ T+ +A
Sbjct: 79 LKLDHYCSQGELWSWTLFFAGVTAVA-FGSSYYHLKPNDATLVWDRLPMTIAFTSVMAIF 137
Query: 107 IDEAVDNFFATHTLRVKALGRELSM 131
I E VD+ T +L + LS+
Sbjct: 138 IIERVDDRAGTKSLAPLVIAGALSI 162
>03_06_0086 +
31544761-31544961,31546036-31546201,31546568-31546626,
31547202-31547320,31547410-31547647,31547718-31547841,
31547989-31548068
Length = 328
Score = 30.3 bits (65), Expect = 3.7
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 368 DASTDDNVKCNTQYNPDGKPAVCREYRRKKRDIIDIFQNSYRYILSKLFGTSINRRTVAN 427
DAS+D V + N DG C KK + D Q ++ + S + G ++ +
Sbjct: 179 DASSDMQVYYLSSCNEDGSDPKCENLGWKKLEEYDPSQQRWKCLASLVEGGHLSEDMTGD 238
Query: 428 PKYKIVNGVKYVYQPFRA 445
P+ +N Y PF A
Sbjct: 239 PEEMTINDY-YSSLPFAA 255
>03_02_0901 +
12267042-12267182,12267949-12268095,12268163-12268253,
12268367-12268485,12268779-12268969,12269440-12269650,
12270072-12270309,12270944-12271329,12271933-12271956,
12271984-12272077,12272341-12272525,12273025-12273255,
12273665-12273730,12273816-12274034,12274764-12275003,
12275244-12275423,12276269-12276535,12276612-12276815,
12276896-12277048
Length = 1128
Score = 30.3 bits (65), Expect = 3.7
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 293 EIVAGKKEIAEDISSEIPGTDDREKLTHVNRFDNDIVEDITLDNDSNWKTSILIGKLLKK 352
+++ G +E +D+ SE G DD+ + + + D +N+S WK S+L L ++
Sbjct: 513 KLLKGAEE--DDVDSENSG-DDQLSEGSADDSEESLDSDDETENNSKWKESLLARTLSRR 569
Query: 353 SA-VNELKTERNSRNGDASTDDNVK 376
SA + +L + S+ D D + +
Sbjct: 570 SANLMQLVYGQASKKLDEGNDSSAE 594
>11_08_0040 +
27891797-27891823,27891934-27892091,27892169-27892463,
27892548-27892607,27892686-27893036
Length = 296
Score = 29.9 bits (64), Expect = 4.8
Identities = 32/168 (19%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 239 SRSILEKEKRKPIVTSIASTVRI-NGKTTNANEIIKENGMKEI--KHRLAKRNV-DALEI 294
S +I + + + T ++S + + +GK II++ K++ K +L+++N+ +
Sbjct: 77 SCTIFDDVAQSMLETPVSSLLNLLDGKNDEIPNIIQQLCGKQLIFKFKLSEQNLTEGTPN 136
Query: 295 VAGKKEIAEDISSEIPGTDDREKLTHVNRFDNDIVEDITLDNDSNWKTSILIGKLLKKSA 354
KK D E ++ + D+D+ + D ++N + G L+K +
Sbjct: 137 YVVKKTFVPDYMLEKQYLINKAE---EELMDDDVDNILKQDRETNQQEQTSSGPLIKNRS 193
Query: 355 VNELKTERNSRNGDASTDDNVKCNTQYNPDGKPAVCREYRRKKRDIID 402
++ L ++ + +D + + KP C++ RR+ I D
Sbjct: 194 ISLLPVKQELED----SDQEITSEDELTSSDKPPSCKQIRRRSYIIED 237
>06_03_0749 +
24133302-24134274,24134585-24135272,24135751-24135857,
24137565-24137815
Length = 672
Score = 29.9 bits (64), Expect = 4.8
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Query: 267 NANEIIKENGMKEI-KHRLAKRNVDA-LEIVAGKK-EIAEDISSEIP--GTD-DREKLTH 320
N+ E +K N + I +H + K + LE GKK E+ + SEI D RE+ H
Sbjct: 187 NSLEDMKGNFERLIARHEVEKERIPGRLEEEMGKKDEVIGRLESEIAEKAADVSRERDAH 246
Query: 321 VNRFDNDIVEDITLDNDSNWKTSILIGKLLKKSAVNELKTERNSRNGDASTDDNVKCNTQ 380
++D L + N + ++ K+ +LK++ N G ++ K
Sbjct: 247 QRMLQQVELKDKDLLLEQNKRKDLIEDYTKLKTLYKDLKSQYNFLVGKIGQNEGSKSPVV 306
Query: 381 YNPDGKPAVCREYRRKKRDIID 402
D K + +RK +D++D
Sbjct: 307 NVVDRKTSGSPPSKRKLKDLVD 328
>06_03_0928 +
26024589-26024645,26024900-26024956,26025464-26025707,
26026126-26026238,26026675-26026761,26026843-26026962
Length = 225
Score = 29.5 bits (63), Expect = 6.4
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 245 KEKRKPIVTSIASTVRINGKTTNANEIIKENGMKEIKHRLAKRNVDALEIVAGKKEIAED 304
KE R +T I + + T N ++ +NG + R+A+R VD +A K E+
Sbjct: 95 KETRVKAITEIFAEAGFSDVTKNFLAVLADNGRLKHIDRIAERFVDL--TMAHKGEVKVL 152
Query: 305 ISSEIPGTDDREK 317
+ + IP + EK
Sbjct: 153 VRTVIPLPEKEEK 165
>04_03_0091 -
11043023-11043090,11043458-11043566,11044431-11044577,
11044678-11044776,11044857-11044982,11045448-11045582,
11046391-11046468,11046553-11046678,11046828-11046968
Length = 342
Score = 29.1 bits (62), Expect = 8.4
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 356 NELKTERNSRNG--DASTDDNVKCNTQYNPDGKP 387
NE K R G D S++DN+ ++NPDG P
Sbjct: 182 NEGKISRCDVKGLCDTSSEDNILAMVEFNPDGLP 215
>02_01_0335 +
2386902-2386906,2386976-2387282,2387664-2387777,
2390252-2390320,2390416-2390715,2390829-2390930,
2391085-2391279,2391377-2391664,2391942-2392128,
2393168-2393272,2393778-2393824,2393982-2394074
Length = 603
Score = 29.1 bits (62), Expect = 8.4
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 243 LEKEKRKPIVTSIASTVRINGKTTNANEIIKENGMKEIKHRLAKRNVDALEIVAGKKEIA 302
+E K KP++T + + + + T E++ ++G E + RN+ +E A E+
Sbjct: 205 MELRKEKPMLTPDITIMSVGTEITYGEEMVPDDGWVEYLNNKWDRNI-VVEETANVSELK 263
Query: 303 EDISSE 308
+ SE
Sbjct: 264 LQVESE 269
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,439,162
Number of Sequences: 37544
Number of extensions: 395965
Number of successful extensions: 1039
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1036
Number of HSP's gapped (non-prelim): 12
length of query: 493
length of database: 14,793,348
effective HSP length: 85
effective length of query: 408
effective length of database: 11,602,108
effective search space: 4733660064
effective search space used: 4733660064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 62 (29.1 bits)
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