Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000053-TA|BGIBMGA000053-PA|IPR012464|Protein of unknown
function DUF1676
(493 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061) 36 0.098
SB_11945| Best HMM Match : EURL (HMM E-Value=9.7) 33 0.52
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 32 1.2
SB_30481| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.1
SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.8
SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34) 30 3.7
SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.7
SB_11628| Best HMM Match : DUF1014 (HMM E-Value=0.64) 30 4.9
SB_37865| Best HMM Match : IL12 (HMM E-Value=6.1) 29 8.5
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 29 8.5
SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20) 29 8.5
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 8.5
SB_25880| Best HMM Match : Colipase_C (HMM E-Value=5.1) 29 8.5
SB_11029| Best HMM Match : GPS (HMM E-Value=2.2e-07) 29 8.5
>SB_18588| Best HMM Match : zf-C2H2 (HMM E-Value=0.0061)
Length = 503
Score = 35.5 bits (78), Expect = 0.098
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 9/138 (6%)
Query: 245 KEKRKPIVTSIASTVRINGKTTNANEIIK-ENGMKEIKHRLAKRNVDALEIVAGKKEIAE 303
KEK++ +++ +++ K + ++ +N ++E K +L R LE+ +G KE E
Sbjct: 341 KEKQQLVISLQHDLNQVSSKEAESQQVRNLQNQLEETKRQLENREKTVLELESGLKEKKE 400
Query: 304 DISS-EIPGTDDREKLTHVNRFDNDIVEDITLDNDSNW----KTSILIGKLLKKSA--VN 356
D+S E+ D K+ + + +N+S L K LK+S+ +
Sbjct: 401 DVSRLELERADLMAKI-EAGEGTETAIHQLKKENESLQTRLSDAQALSQKQLKESSSRLE 459
Query: 357 ELKTERNSRNGDASTDDN 374
E+ + N A+ DD+
Sbjct: 460 EMHQQHNKVGNYAAADDD 477
>SB_11945| Best HMM Match : EURL (HMM E-Value=9.7)
Length = 323
Score = 33.1 bits (72), Expect = 0.52
Identities = 21/102 (20%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 237 WQSRSILEKEKRKPIVTSIASTVRINGKTTNANEIIKENGMKEIKHRLAKRNVDALEIVA 296
W+ + I ++ + + ++S +G+ ++ N+++K+N + K R+ R + I++
Sbjct: 198 WRHKEINHGDEVISVASVLSSPETESGEASSENKLLKKNTFNKAKDRIKSRKEEIFGILS 257
Query: 297 GK------KEIAEDISSEIPGTDDREKLTHVNRFDNDIVEDI 332
+++ EDI P R L+ V + N ED+
Sbjct: 258 DSSKDQEARQVIEDILPASPKEGKRSFLSSVVKSFNQSEEDL 299
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 31.9 bits (69), Expect = 1.2
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 346 IGKLLKKSAVNELKTERNSRNGDASTDDNVKCNTQYN---PDGKPAVCREYRRK 396
I K KK+ NE K E+N R + +D++K T + P KP V E R++
Sbjct: 788 IKKNRKKTMENESKNEKNKRGPVKNNEDDLKPGTNLSPKQPSDKPVVFMELRQQ 841
>SB_30481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 31.1 bits (67), Expect = 2.1
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 357 ELKTERNSRNGDASTDDNVKCNTQYNPDGKPAVCREYRRKKRDIIDIFQNSYRYILSKLF 416
E TE N+ + +TD N + NT+YN + EY + I + Y + +
Sbjct: 98 EYNTEYNNEYTEYNTDYNTEYNTEYNTEYNTEYNTEYTEYITEYITEYNTDYNTEYNTEY 157
Query: 417 GTSINRRTVANPKY 430
T N T N +Y
Sbjct: 158 NTEYN--TEYNTEY 169
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 2/82 (2%)
Query: 357 ELKTERNSRNGDASTDDNVKCNTQYNPDGKPAVCREYRRKKRDIIDIFQNSYRYILSKLF 416
E TE N+ + T+ N NT+YN + EY + + I + Y + +
Sbjct: 94 EYNTEYNTEYNNEYTEYNTDYNTEYNTEYNTEYNTEYNTEYTEYITEYITEYNTDYNTEY 153
Query: 417 GTSINRRTVANPKYKIVNGVKY 438
T N T N +Y +Y
Sbjct: 154 NTEYN--TEYNTEYNTEYNTEY 173
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/65 (23%), Positives = 28/65 (43%)
Query: 357 ELKTERNSRNGDASTDDNVKCNTQYNPDGKPAVCREYRRKKRDIIDIFQNSYRYILSKLF 416
E TE N+ + + +T+ N + NT+YN + EY + + + Y + +
Sbjct: 67 EYNTEYNTEHTEYNTEYNTEYNTEYNTEYNTEYNTEYNNEYTEYNTDYNTEYNTEYNTEY 126
Query: 417 GTSIN 421
T N
Sbjct: 127 NTEYN 131
>SB_56761| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 633
Score = 30.7 bits (66), Expect = 2.8
Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Query: 355 VNELKTERNSR-NGDASTDDNVKCNTQYNPDGKPAVCREYRRKKRDIIDIFQNSYRYILS 413
+ E TE N+ N + +T+ N + NT+YN + EY + I + Y +
Sbjct: 363 ITEYNTEYNTEYNTEYNTEYNTEYNTEYNTEYNTEYNTEYTEYITEYITEYNTDYNTDYN 422
Query: 414 KLFGTSINRRTVANPKYKIVNGVKY 438
+ T N T N +Y +Y
Sbjct: 423 TEYNTEYN--TEYNTEYNTEYNTEY 445
>SB_42288| Best HMM Match : Transglut_N (HMM E-Value=9.2e-34)
Length = 686
Score = 30.3 bits (65), Expect = 3.7
Identities = 11/27 (40%), Positives = 21/27 (77%)
Query: 298 KKEIAEDISSEIPGTDDREKLTHVNRF 324
K+ I ++IS++ G+D+RE +TH+ +F
Sbjct: 485 KQSIGKNISTKAVGSDEREDITHLYKF 511
>SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1569
Score = 30.3 bits (65), Expect = 3.7
Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 17/133 (12%)
Query: 239 SRSILEKEKRKPIVTSIAS-----TVRINGKTTNANEIIKENGMKEIKHRLAKRNVDALE 293
+R K + +PIV + R + K+T A E + E + K R A+
Sbjct: 1443 TRGKKRKAEEEPIVVEAEAIEEPKAARSSRKSTKAQEPLTEPKAEVTKTRSAR------- 1495
Query: 294 IVAGKKEIAEDISSEIPGTDDREKLTHVNRFDNDIVEDITLDNDSNWKTSILIGKLLKKS 353
GKK++AE IS +IP +D K VE + + T GK K
Sbjct: 1496 ---GKKQLAEPISDDIPVVEDAPKTRSTRGMKKAKVEPSSAEEVPK-STRKTRGK-KKAV 1550
Query: 354 AVNELKTERNSRN 366
AV E T R +RN
Sbjct: 1551 AVEEPVTTRVTRN 1563
>SB_11628| Best HMM Match : DUF1014 (HMM E-Value=0.64)
Length = 423
Score = 29.9 bits (64), Expect = 4.9
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 346 IGKLLKKSAVNELKTERNSRNGDASTD-DNVKCNTQYNPDGKPAVCREYRRKKRDIIDIF 404
I K+ K N+ K + + + +D D K N +G+ C E RKK++ +
Sbjct: 54 IPKVRSKKRQNKNKEDEEKKKENTESDGDGEKTEHDENKEGEKVECEECCRKKKEQQEAK 113
Query: 405 QNSYRYILSKLFGTSINRRTVANPKYKIVNGVKYVYQPFRASQKVKIIAAEDFNKGEIME 464
+N +++ G + + + K+K+ A KV II +D+N ++
Sbjct: 114 EN-VETVVTTTNGKAQPSASTSASKHKVFPS---------AEVKVNIIQRQDYNTPKVTI 163
Query: 465 G 465
G
Sbjct: 164 G 164
>SB_37865| Best HMM Match : IL12 (HMM E-Value=6.1)
Length = 236
Score = 29.1 bits (62), Expect = 8.5
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 20/153 (13%)
Query: 249 KPIVTSIASTVRINGKTTNANEIIKENGMKEIKHRLAKRNVDALEIVAGKKEIAEDISSE 308
+ I+ + ++ I G T + + + NG K + +++ +V+ ++ KK +E
Sbjct: 55 RAILPKVMNSGLIPGTKTESQKTTQPNGPKIPLNTISEHSVNP--VIPSKK-------NE 105
Query: 309 IPGTDDR--EKLTHVNRFDNDIVEDITLDNDSNWK-----TSILIGKLLKKSAVNELKTE 361
IPG +K F + + ++ LD+ N + ++ L+ LL S+V +K+
Sbjct: 106 IPGKSQSITDKTMLEKSFISALSKNSNLDSKKNTQAQSDDSNNLVAGLL--SSVLGVKST 163
Query: 362 RNSR--NGDASTDDNVKCNTQYNPDGKPAVCRE 392
R S NG S+ + K N NP K A E
Sbjct: 164 RTSTVTNGVNSSSKSAKTNVSVNPSSKSATGTE 196
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 29.1 bits (62), Expect = 8.5
Identities = 21/86 (24%), Positives = 33/86 (38%)
Query: 305 ISSEIPGTDDREKLTHVNRFDNDIVEDITLDNDSNWKTSILIGKLLKKSAVNELKTERNS 364
+S+ P D K+T+ + ND E + D K ++ K + +
Sbjct: 1618 VSATDPDAGDNAKITYAFKSPNDKFEIDSTSGDIRTKVALTGTKDVNEKMTVVASNTEAI 1677
Query: 365 RNGDASTDDNVKCNTQYNPDGKPAVC 390
+ GDA+ D T Y D P VC
Sbjct: 1678 QGGDANNRDRETEVTIYITDLAPPVC 1703
>SB_15422| Best HMM Match : TACC (HMM E-Value=6.4e-20)
Length = 1362
Score = 29.1 bits (62), Expect = 8.5
Identities = 26/125 (20%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 345 LIGKLLKKSAVNELKTERNSRNGDASTDDNVKCNTQYNPDGKPAVCREYRRKKRDIID-- 402
L+ ++ ++SA+ +++ + S+ ASTD+N K + N + + V EY R ++I+
Sbjct: 261 LLKQVHEESAIRDMEIQEISKKCQASTDENEKLRRE-NEELR-TVMNEYERTMAEMIENG 318
Query: 403 -----IFQNSYRYILSKLFGTSINRRTVA---NPKYKIVNGVKYVYQPFRASQKVKIIAA 454
+F NS ++ + + +V + ++ + +K V + F+ ++++ AA
Sbjct: 319 KKSQTMFDNSKSEVIKERDQLQADLNSVEAAFSDLHRRYDKLKGVVENFKKNEEILKKAA 378
Query: 455 EDFNK 459
D+ +
Sbjct: 379 RDYQE 383
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 29.1 bits (62), Expect = 8.5
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 252 VTSIASTVRINGKTTNANEIIKE-NGMKEIKHRLAKRNVDALEIVAGKKEIAEDISSEIP 310
+ I + N + EI KE N + +K +RN+ + + K + + I +
Sbjct: 624 IPDIVNVAEGNLEAKELKEIKKEKNNDRNVKSTEQERNIAKVTVYNKKAKKSVSIDKQTI 683
Query: 311 GTDDREKLTHVNRFDNDIVEDITL 334
+D +K TH+N N++ + ++L
Sbjct: 684 SSDKHKKSTHMN---NEVKKSVSL 704
>SB_25880| Best HMM Match : Colipase_C (HMM E-Value=5.1)
Length = 172
Score = 29.1 bits (62), Expect = 8.5
Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 14 LKTTLVLFAVVSTTSSQLKSPDRIFESAYSECLMKFSYVCLQRKTLSYLKVLNGLSEVSV 73
+K+ LVL A+V+ +S+ K F+ ++C C+ KTL + L + +
Sbjct: 1 MKSVLVLCAIVALSSACTKLQK--FQQCNNKCACASGLSCMLTKTLEFQGQLIHIKQCMP 58
Query: 74 FGDYVKFVKFNSSKLEEDKPPVNTTDTAQLAS 105
G+ + ++E P +T + A+
Sbjct: 59 AGEEIPTEHLTDKDVQETLKPGSTRAMTETAA 90
>SB_11029| Best HMM Match : GPS (HMM E-Value=2.2e-07)
Length = 184
Score = 29.1 bits (62), Expect = 8.5
Identities = 17/60 (28%), Positives = 26/60 (43%)
Query: 402 DIFQNSYRYILSKLFGTSINRRTVANPKYKIVNGVKYVYQPFRASQKVKIIAAEDFNKGE 461
D +N Y+ K GTSI R +PK GV+ V F+ + + + D + E
Sbjct: 42 DRTENKVSYLRCKYNGTSIKRTFPKSPKQARTQGVRRVLAIFKVGTYMGVYRSLDSSSSE 101
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.130 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,916,481
Number of Sequences: 59808
Number of extensions: 535119
Number of successful extensions: 3443
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 3386
Number of HSP's gapped (non-prelim): 68
length of query: 493
length of database: 16,821,457
effective HSP length: 85
effective length of query: 408
effective length of database: 11,737,777
effective search space: 4789013016
effective search space used: 4789013016
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 62 (29.1 bits)
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