GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000053-TA|BGIBMGA000053-PA|IPR012464|Protein of unknown
function DUF1676
         (493 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            27   1.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   3.5  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    25   4.6  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    25   4.6  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   8.1  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   8.1  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    24   8.1  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 20/83 (24%), Positives = 33/83 (39%)

Query: 282 HRLAKRNVDALEIVAGKKEIAEDISSEIPGTDDREKLTHVNRFDNDIVEDITLDNDSNWK 341
           ++LA   ++ L   A      E ++  IP  D+   L         + +   LD  SNW 
Sbjct: 458 NQLAFETLNTLPATAPDTGDQEQLTDHIPAPDEFSLLAQDGTPFQHLHQLRELDLSSNWL 517

Query: 342 TSILIGKLLKKSAVNELKTERNS 364
           T++    LL    +  L   RN+
Sbjct: 518 TAVPRDLLLNTHELQRLNLTRNN 540


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 3.5
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 1/71 (1%)

Query: 240 RSILEKEKRKPIVTSIA-STVRINGKTTNANEIIKENGMKEIKHRLAKRNVDALEIVAGK 298
           R+ +E +K++ +    A  TVR   +   A +   E GM+    R+ +   DA +I    
Sbjct: 367 RADIESKKQEYVALKEAYGTVRRTLQDVQAKQAAIERGMRNASERVTRIQKDARQIEQDL 426

Query: 299 KEIAEDISSEI 309
           +E   D  S++
Sbjct: 427 QERNRDGLSQV 437


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 10/29 (34%), Positives = 19/29 (65%)

Query: 322 NRFDNDIVEDITLDNDSNWKTSILIGKLL 350
           NRF N++  D+T+ +  +  TS+L G ++
Sbjct: 346 NRFHNNVYRDVTIVSIMDTLTSMLAGLIV 374


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 10/29 (34%), Positives = 19/29 (65%)

Query: 322 NRFDNDIVEDITLDNDSNWKTSILIGKLL 350
           NRF N++  D+T+ +  +  TS+L G ++
Sbjct: 346 NRFHNNVYRDVTIVSIMDTLTSMLAGLIV 374


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 91   DKPPVNTTDTAQ-LASLIDEA---VDNFFATHTLRVKALGRELSMTR 133
            D+PPV T      LA  + E    +      H LR +AL REL  TR
Sbjct: 1378 DRPPVATFSCPDGLAHALSEQNLRLQQIVYEHRLREEALQRELYATR 1424


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 91   DKPPVNTTDTAQ-LASLIDEA---VDNFFATHTLRVKALGRELSMTR 133
            D+PPV T      LA  + E    +      H LR +AL REL  TR
Sbjct: 1375 DRPPVATFSCPDGLAHALSEQNLRLQQIVYEHRLREEALQRELYATR 1421


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.2 bits (50), Expect = 8.1
 Identities = 7/33 (21%), Positives = 20/33 (60%)

Query: 273 KENGMKEIKHRLAKRNVDALEIVAGKKEIAEDI 305
           ++   ++ +H + + NVD +E++ G+ +  E +
Sbjct: 182 EQQHQRQQQHTVRRHNVDKVEVIPGENQTWETV 214


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.130    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 380,727
Number of Sequences: 2123
Number of extensions: 14384
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 28
Number of HSP's gapped (non-prelim): 7
length of query: 493
length of database: 516,269
effective HSP length: 67
effective length of query: 426
effective length of database: 374,028
effective search space: 159335928
effective search space used: 159335928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 50 (24.2 bits)