GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000053-TA|BGIBMGA000053-PA|IPR012464|Protein of unknown
function DUF1676
         (493 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543495-1|AAN40505.1|  453|Homo sapiens melanoma-associated ant...    33   3.0  
AB046861-1|BAB13467.1|  718|Homo sapiens KIAA1641 protein protein.     32   4.0  

>AF543495-1|AAN40505.1|  453|Homo sapiens melanoma-associated
           antigen protein.
          Length = 453

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 9/121 (7%)

Query: 241 SILEKEKRKPIVTSIASTVRINGKTTNANEIIKENGMKEIKHRLAKRNVDALEIVAGKKE 300
           +I +++K++  V  +   VR   + T     I+ +  K IK  L    V   E+  G   
Sbjct: 25  AIQQEKKKRRNVEEVHQKVREKLRITEEQYRIEADVTKPIKPALKSAEV---ELKTGGNN 81

Query: 301 IAEDISSEIPGTDDREKLTHVNRFDNDIVEDITLDNDSNWKTSILIGKLLKKSAVNELKT 360
                S+++  TD++E L H NR   D +  + L+ D+  K   L  K LK   + + K 
Sbjct: 82  -----SNQVSETDEKEDLLHENRLMQDEIARLRLEKDT-IKNQNLEKKYLKDFEIVKRKH 135

Query: 361 E 361
           E
Sbjct: 136 E 136


>AB046861-1|BAB13467.1|  718|Homo sapiens KIAA1641 protein protein.
          Length = 718

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 9/121 (7%)

Query: 241 SILEKEKRKPIVTSIASTVRINGKTTNANEIIKENGMKEIKHRLAKRNVDALEIVAGKKE 300
           +I +++K++  V  +   VR   + T     I+ +  K IK  L    V   E+  G   
Sbjct: 290 AIQQEKKKRRNVEELHQKVREKLRITEEQYRIEADVTKPIKPALKSAEV---ELKTGGNN 346

Query: 301 IAEDISSEIPGTDDREKLTHVNRFDNDIVEDITLDNDSNWKTSILIGKLLKKSAVNELKT 360
                S+++  TD++E L H NR   D +  + L+ D+  K   L  K LK   + + K 
Sbjct: 347 -----SNQVSETDEKEDLLHENRLMQDEIARLRLEKDT-IKNQNLEKKYLKDFEIVKRKH 400

Query: 361 E 361
           E
Sbjct: 401 E 401


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.130    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,675,724
Number of Sequences: 224733
Number of extensions: 1784713
Number of successful extensions: 7350
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 7348
Number of HSP's gapped (non-prelim): 4
length of query: 493
length of database: 73,234,838
effective HSP length: 93
effective length of query: 400
effective length of database: 52,334,669
effective search space: 20933867600
effective search space used: 20933867600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 67 (31.1 bits)