GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000053-TA|BGIBMGA000053-PA|IPR012464|Protein of unknown
function DUF1676
         (493 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    26   0.82 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   5.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    23   7.7  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           23   7.7  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.8 bits (54), Expect = 0.82
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 10/64 (15%)

Query: 303 EDISSEIPGTDDREKL--TH-VNRFDNDIVEDITLDNDSNWKTSILIGKLLKKSAVNELK 359
           +D++  I G + +E +  TH VN   ND +++    ND+N K +       KK+A N+  
Sbjct: 394 DDVNFRILGANVKELIRNTHCVNNNQNDNIQNTNNQNDNNQKNN-------KKNANNQKN 446

Query: 360 TERN 363
             +N
Sbjct: 447 NNQN 450


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 413 SKLFGTSINRRTVANPKYKIVNGVKYVY 440
           SKLFG +++RR  A   +    G   +Y
Sbjct: 457 SKLFGRALSRRIKATVLFATETGTSQMY 484


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)

Query: 96  NTTDTAQLASLIDEAVDNFFAT 117
           N  D   L  LID A D FF T
Sbjct: 398 NKIDETTLKHLIDVASDRFFIT 419


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 11/22 (50%), Positives = 11/22 (50%)

Query: 96  NTTDTAQLASLIDEAVDNFFAT 117
           N  D   L  LID A D FF T
Sbjct: 398 NKIDETTLKHLIDVASDRFFIT 419


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.130    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,564
Number of Sequences: 429
Number of extensions: 4871
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 4
length of query: 493
length of database: 140,377
effective HSP length: 60
effective length of query: 433
effective length of database: 114,637
effective search space: 49637821
effective search space used: 49637821
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)
S2: 46 (22.6 bits)