Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000051-TA|BGIBMGA000051-PA|IPR012464|Protein of unknown
function DUF1676
         (248 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with ...    31   3.8  
BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with ...    31   3.8  
AK000990-1|BAA91457.1|  535|Homo sapiens protein ( Homo sapiens ...    31   3.8  
AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.    31   3.8  
AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.     31   3.8  

>BC113409-1|AAI13410.1| 1416|Homo sapiens uveal autoantigen with
            coiled-coil domains and ankyrin repeats protein.
          Length = 1416

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 57   KLNGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDS 116
            K N ++  KL   +  +++DL++     + + E+ RAL  K DE ++K L      Y + 
Sbjct: 1024 KKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDE-LNKQLKDLSQKYTEV 1082

Query: 117  HTVRLRLLDDGAAEEARAL 135
              V+ +L+++ A + +  L
Sbjct: 1083 KNVKEKLVEENAKQTSEIL 1101


>BC113407-1|AAI13408.1| 1416|Homo sapiens uveal autoantigen with
            coiled-coil domains and ankyrin repeats protein.
          Length = 1416

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 57   KLNGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDS 116
            K N ++  KL   +  +++DL++     + + E+ RAL  K DE ++K L      Y + 
Sbjct: 1024 KKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDE-LNKQLKDLSQKYTEV 1082

Query: 117  HTVRLRLLDDGAAEEARAL 135
              V+ +L+++ A + +  L
Sbjct: 1083 KNVKEKLVEENAKQTSEIL 1101


>AK000990-1|BAA91457.1|  535|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10128 fis, clone HEMBA1002997, weakly similar to
           CENTROMERIC PROTEIN E. ).
          Length = 535

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 57  KLNGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDS 116
           K N ++  KL   +  +++DL++     + + E+ RAL  K DE ++K L      Y + 
Sbjct: 372 KKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDE-LNKQLKDLSQKYTEV 430

Query: 117 HTVRLRLLDDGAAEEARAL 135
             V+ +L+++ A + +  L
Sbjct: 431 KNVKEKLVEENAKQTSEIL 449


>AF322916-1|AAG49577.1| 1416|Homo sapiens uveal autoantigen protein.
          Length = 1416

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 57   KLNGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDS 116
            K N ++  KL   +  +++DL++     + + E+ RAL  K DE ++K L      Y + 
Sbjct: 1024 KKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDE-LNKQLKDLSQKYTEV 1082

Query: 117  HTVRLRLLDDGAAEEARAL 135
              V+ +L+++ A + +  L
Sbjct: 1083 KNVKEKLVEENAKQTSEIL 1101


>AB046781-1|BAB13387.2| 1416|Homo sapiens KIAA1561 protein protein.
          Length = 1416

 Score = 31.1 bits (67), Expect = 3.8
 Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 57   KLNGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDS 116
            K N ++  KL   +  +++DL++     + + E+ RAL  K DE ++K L      Y + 
Sbjct: 1024 KKNKQENDKLKKEIFTLQKDLRDKTVLIEKSHEMERALSRKTDE-LNKQLKDLSQKYTEV 1082

Query: 117  HTVRLRLLDDGAAEEARAL 135
              V+ +L+++ A + +  L
Sbjct: 1083 KNVKEKLVEENAKQTSEIL 1101


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.314    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,008,517
Number of Sequences: 224733
Number of extensions: 1115207
Number of successful extensions: 2297
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2297
Number of HSP's gapped (non-prelim): 5
length of query: 248
length of database: 73,234,838
effective HSP length: 88
effective length of query: 160
effective length of database: 53,458,334
effective search space: 8553333440
effective search space used: 8553333440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 64 (29.9 bits)