Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000051-TA|BGIBMGA000051-PA|IPR012464|Protein of unknown
function DUF1676
(248 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical pr... 33 0.25
AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-relat... 29 2.3
AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase prote... 29 2.3
Z81086-9|CAD30440.1| 75|Caenorhabditis elegans Hypothetical pr... 29 3.1
U41543-8|AAB37025.2| 393|Caenorhabditis elegans Hypothetical pr... 28 5.4
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 28 5.4
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 28 5.4
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 28 5.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 28 5.4
>Z22174-1|CAA80128.1| 732|Caenorhabditis elegans Hypothetical
protein K01B6.1 protein.
Length = 732
Score = 32.7 bits (71), Expect = 0.25
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 7 LTLAAAVVGLPNPEPKPTEPVEATGRAKVDCNGGIFSPTCLKIEAISM---LEKLNGKQE 63
+ LA++ P+ P ++P AT RA DC+ SPT SM +NG
Sbjct: 1 MMLASSAPTAPSLLPPSSQPSAATTRAD-DCSSST-SPTNTSASDASMEMLTSLMNGAVA 58
Query: 64 LKLLPGVSIVKEDLKENETKPDFAAELA 91
PG ++VK++ T P F +LA
Sbjct: 59 AAAAPGNALVKQESPPLTTPPLFNPDLA 86
>AF088288-1|AAC98295.1| 826|Caenorhabditis elegans caspase-related
protein 2A protein.
Length = 826
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 57 KLNGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDS 116
K G LK+ +S +++D++ + + D + + +D L L S
Sbjct: 260 KTIGASVLKIEQEISAMRDDVRASRSTDDVGISMDEVYEKRRRVEVDYMQLLRQCQDLIS 319
Query: 117 HTVRLRLLDDGAAEEARALVG 137
+RL ++D AE+AR G
Sbjct: 320 LQIRLHAMNDEHAEQARRAEG 340
>AC084197-7|AAM44398.1| 826|Caenorhabditis elegans Caspase protein
2 protein.
Length = 826
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 57 KLNGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDS 116
K G LK+ +S +++D++ + + D + + +D L L S
Sbjct: 260 KTIGASVLKIEQEISAMRDDVRASRSTDDVGISMDEVYEKRRRVEVDYMQLLRQCQDLIS 319
Query: 117 HTVRLRLLDDGAAEEARALVG 137
+RL ++D AE+AR G
Sbjct: 320 LQIRLHAMNDEHAEQARRAEG 340
>Z81086-9|CAD30440.1| 75|Caenorhabditis elegans Hypothetical
protein F53B6.9 protein.
Length = 75
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 218 YTHSHSHSTAHEDVGGYGHSGYG 240
+++SHSH H GGY GYG
Sbjct: 26 HSYSHSHEHHHHHHGGYYGGGYG 48
>U41543-8|AAB37025.2| 393|Caenorhabditis elegans Hypothetical
protein F46H5.8 protein.
Length = 393
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Query: 210 YEIVSKPVYTHSHSHSTAHEDVGGYGHSGYGRN 242
Y ++ +PV H + H+ +E+ GYG Y +N
Sbjct: 302 YRLLKQPVLEHVYDHAIGYEENKGYGFQ-YTKN 333
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 20 EPKPTEPVEATGRAKVDCNGGIFSPTCLKIEAISMLEKLNGKQELKLLPGVSIVKEDLKE 79
E KPT P + + + SPT + ++ EK + + P S+V+E
Sbjct: 1663 EEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSP 1722
Query: 80 NETKPDFAAELARALPSKPDERIDK 104
E P+ A E ++ P+K ++ +K
Sbjct: 1723 KEKSPEKAEEKPKS-PTKKEKSPEK 1746
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 20 EPKPTEPVEATGRAKVDCNGGIFSPTCLKIEAISMLEKLNGKQELKLLPGVSIVKEDLKE 79
E KPT P + + + SPT + ++ EK + + P S+V+E
Sbjct: 1663 EEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSP 1722
Query: 80 NETKPDFAAELARALPSKPDERIDK 104
E P+ A E ++ P+K ++ +K
Sbjct: 1723 KEKSPEKAEEKPKS-PTKKEKSPEK 1746
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 20 EPKPTEPVEATGRAKVDCNGGIFSPTCLKIEAISMLEKLNGKQELKLLPGVSIVKEDLKE 79
E KPT P + + + SPT + ++ EK + + P S+V+E
Sbjct: 1663 EEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSP 1722
Query: 80 NETKPDFAAELARALPSKPDERIDK 104
E P+ A E ++ P+K ++ +K
Sbjct: 1723 KEKSPEKAEEKPKS-PTKKEKSPEK 1746
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Query: 20 EPKPTEPVEATGRAKVDCNGGIFSPTCLKIEAISMLEKLNGKQELKLLPGVSIVKEDLKE 79
E KPT P + + + SPT + ++ EK + + P S+V+E
Sbjct: 1663 EEKPTSPTKKESSPTKKTDDEVKSPTKKEKSPQTVEEKPASPTKKEKSPEKSVVEEVKSP 1722
Query: 80 NETKPDFAAELARALPSKPDERIDK 104
E P+ A E ++ P+K ++ +K
Sbjct: 1723 KEKSPEKAEEKPKS-PTKKEKSPEK 1746
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.314 0.133 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,846,510
Number of Sequences: 27539
Number of extensions: 182252
Number of successful extensions: 483
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 473
Number of HSP's gapped (non-prelim): 14
length of query: 248
length of database: 12,573,161
effective HSP length: 80
effective length of query: 168
effective length of database: 10,370,041
effective search space: 1742166888
effective search space used: 1742166888
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
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