Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000051-TA|BGIBMGA000051-PA|IPR012464|Protein of unknown
function DUF1676
(248 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0245 + 15995689-15995742,15995979-15996075,15996165-159961... 30 1.5
12_01_0437 - 3449611-3449715,3451831-3451878,3452002-3452120,345... 30 2.0
02_05_1237 + 35149292-35149442,35149552-35150006 30 2.0
09_02_0414 - 8825575-8826654,8826737-8827144 29 3.5
08_02_0707 - 20212190-20214592 29 3.5
12_01_0179 - 1319291-1319332,1319884-1320579,1322759-1323207,132... 29 4.7
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141... 29 4.7
08_01_0407 - 3613417-3613506,3613603-3613713,3613789-3613857,361... 29 4.7
02_03_0253 + 16905723-16907105 29 4.7
07_01_0511 + 3806475-3806876,3807914-3808039,3808120-3808193,380... 28 8.2
04_04_0058 - 22416949-22418196 28 8.2
01_01_0623 + 4672581-4673413,4674274-4674389,4674694-4674902,467... 28 8.2
>09_04_0245 +
15995689-15995742,15995979-15996075,15996165-15996185,
15996442-15996573,15996707-15996834,15996919-15997203,
15997391-15997521,15999700-15999817,16000609-16000703,
16001437-16001511,16001860-16001911,16002767-16002859,
16003625-16003690,16003785-16003867,16003942-16004054,
16005271-16005410,16005569-16005643,16006084-16006160,
16006426-16006514,16008039-16008085,16009004-16009138,
16009298-16009345,16009605-16009667,16009709-16009730,
16010284-16010458,16014250-16014321,16014887-16014958,
16015904-16016005,16016197-16016225,16016333-16016403,
16016549-16016597,16016684-16016784,16017495-16017623,
16017683-16017752,16017975-16018194,16019368-16019389,
16019457-16019604,16021569-16021693,16022344-16022774,
16022984-16023110,16023241-16023292,16023351-16023502
Length = 1461
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 75 EDL-KENETKPDFAAELARALPSKPDERIDKYL-LYSLGNYLDSHTVRLRLL 124
ED+ NE + + L L PD RID L +YS NY H L +L
Sbjct: 937 EDVDSNNEKEKSYGYMLMERLTGSPDGRIDHVLQVYSCSNYWRDHDTALFIL 988
>12_01_0437 -
3449611-3449715,3451831-3451878,3452002-3452120,
3452277-3452422,3452760-3452986
Length = 214
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 62 QELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLG 111
+E ++L I+ D+K+N + A+LA L KP +D+++L LG
Sbjct: 129 REQRMLKNALIINMDVKDNHEEAGVGAKLALDLCQKP-SLLDQHMLDGLG 177
>02_05_1237 + 35149292-35149442,35149552-35150006
Length = 201
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 59 NGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDK 104
NG +EL L+PGV V + E++ + A A P K +R+ +
Sbjct: 41 NGVKELALVPGVEAVDKSAVESKGEVRLVVAAATAKPEKLKDRLHR 86
>09_02_0414 - 8825575-8826654,8826737-8827144
Length = 495
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 54 MLEKLNGKQELKLLPGVSIVKEDLKENETKP 84
MLEK +G Q+ ++L + +ED + ET+P
Sbjct: 350 MLEKESGPQDFEVLDNERVAREDEPKKETQP 380
>08_02_0707 - 20212190-20214592
Length = 800
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 218 YTHSHSHSTAHEDVGGYGHSGYGRNLN 244
++HSHSH HED + H+ G N N
Sbjct: 510 HSHSHSHVHGHEDHHNHDHALQGVNHN 536
>12_01_0179 -
1319291-1319332,1319884-1320579,1322759-1323207,
1323291-1324903,1324991-1325077,1326983-1327251
Length = 1051
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 69 GVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDS 116
GV++ ED+ EN K D EL P + ++ Y LG ++ S
Sbjct: 272 GVTVETEDVGENSKKNDELQELGSINPESDNNKVQ--YQYQLGEFMSS 317
>11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,
1414639-1414725,1416244-1416411,1416785-1416958,
1417662-1417720,1418132-1420154,1420549-1420647,
1420998-1421796,1422101-1422120,1422446-1422513
Length = 1827
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 69 GVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDS 116
GV++ ED+ EN K D EL P + ++ Y LG ++ S
Sbjct: 1319 GVTVETEDVGENSKKNDELQELGSINPESDNNKVQ--YQYQLGEFMSS 1364
>08_01_0407 -
3613417-3613506,3613603-3613713,3613789-3613857,
3613936-3614091,3614156-3614222,3614375-3614470,
3614976-3615142
Length = 251
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/47 (27%), Positives = 32/47 (68%)
Query: 61 KQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLL 107
+++L++ G+S ++E +KE++ K AA++A + P + E D++++
Sbjct: 163 EKQLRVNMGISKLREKVKEHQEKFHSAAKIAGSNPVEWMENADRWIV 209
>02_03_0253 + 16905723-16907105
Length = 460
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 75 EDLKENETKPDFAAELARALPSKPDERIDKYLLYSLGNYLDSHTVRLRLLD 125
E + + T D A RALP KP E +++ LY L H V L D
Sbjct: 18 EHVTPSSTGDDADALSERALPLKPVEPVERLFLYRLAPGAAVHGVLSHLAD 68
>07_01_0511 +
3806475-3806876,3807914-3808039,3808120-3808193,
3808278-3808347,3808431-3808486,3808578-3808649,
3808678-3808811,3808967-3809030,3809111-3809240,
3809326-3809541,3809629-3809750,3810527-3810701,
3810788-3810878,3811040-3811197,3811330-3811518,
3813257-3813340,3813362-3813536,3815300-3815955,
3816226-3816648,3816752-3816790
Length = 1151
Score = 27.9 bits (59), Expect = 8.2
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 46 CLKIEAISMLEKLNGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKY 105
C+ +EAIS+LEKL+ K L L I + KP+ P PDE+ K
Sbjct: 251 CIAVEAISILEKLHSK-GLSLDAPFLIYVCRFVHGDVKPE---NFLLGQPGSPDEK--KL 304
Query: 106 LLYSLG 111
L LG
Sbjct: 305 YLIDLG 310
>04_04_0058 - 22416949-22418196
Length = 415
Score = 27.9 bits (59), Expect = 8.2
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 6 ILTLAAAVVGLPN-PEPKPTEPVEATGRAKVDCNGGIFSPTCLKIEAISMLEKLNGKQEL 64
I++ AA V L PE P E ++ G D GG +CLK+ + L L + L
Sbjct: 339 IVSTAAEVAALERLPEAAPEEE-QSGGGGGGDKRGGAPGASCLKVSSSGRLSNLGAAERL 397
>01_01_0623 +
4672581-4673413,4674274-4674389,4674694-4674902,
4675953-4676072,4676185-4676313,4676394-4676442,
4676899-4676970,4677574-4677707,4677798-4677915,
4678332-4678541,4678630-4678942,4679539-4679632,
4679854-4679962,4680243-4680514,4680597-4680724,
4680832-4681066,4681570-4681758,4681845-4682128,
4682218-4682398,4682486-4682728,4682904-4682986,
4683119-4683227,4687996-4688091,4688675-4688764,
4688881-4689129,4689233-4689412,4690179-4690250,
4691385-4691474,4691605-4691705,4691794-4691959
Length = 1757
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 17 PNPEPKPTEPVEATGRAKVDCNG-GIFSPTCLKIEAISMLEK--LNGKQELKLLPGVSI 72
P+P P P PV + D +G G FS C E + + + G+ L LL G ++
Sbjct: 53 PSPPPPPPPPVAPAATCEGDLHGKGNFSTRCEVSEEVELGGDVYITGEGSLVLLAGAAL 111
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.133 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,886,780
Number of Sequences: 37544
Number of extensions: 226287
Number of successful extensions: 616
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 601
Number of HSP's gapped (non-prelim): 22
length of query: 248
length of database: 14,793,348
effective HSP length: 80
effective length of query: 168
effective length of database: 11,789,828
effective search space: 1980691104
effective search space used: 1980691104
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
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