GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000051-TA|BGIBMGA000051-PA|IPR012464|Protein of unknown
function DUF1676
         (248 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    27   0.51 
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    27   0.51 
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    27   0.51 
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    26   1.2  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   3.6  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   8.4  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   8.4  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 2   YRMYILTLAAAVVGLPNPEPKPTEPVEAT 30
           ++ Y+  L AA   LP P P P+EP E++
Sbjct: 686 WKKYLPQLVAATSNLPGPAP-PSEPCESS 713


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 2   YRMYILTLAAAVVGLPNPEPKPTEPVEAT 30
           ++ Y+  L AA   LP P P P+EP E++
Sbjct: 686 WKKYLPQLVAATSNLPGPAP-PSEPCESS 713


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)

Query: 2   YRMYILTLAAAVVGLPNPEPKPTEPVEAT 30
           ++ Y+  L AA   LP P P P+EP E++
Sbjct: 572 WKKYLPQLVAATSNLPGPAP-PSEPCESS 599


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)

Query: 49  IEAISMLEKLNGKQELKL-LPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLL 107
           I + +M +  +G Q   + LP + +   +L   + K  F     RA P  P ER+  Y  
Sbjct: 608 IVSTTMTKMADGTQRAYVRLPAMFV--SELDGTKIKLGFCVSKVRAAPPTPRERVRCYRC 665

Query: 108 YSLGNY 113
             LG++
Sbjct: 666 LELGHW 671


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 28  EATGRAKVDCNGGIFSPTCLKIEAISMLEKLN 59
           E T R ++ CN G+F  + L   +   L KL+
Sbjct: 69  ENTVRLRLQCNDGLFFQSSLSPGSFKQLTKLH 100


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 205 QKSTTYEIVSKPVYTHSHSHSTAHE 229
           ++  + E V +PV  HS SHS + +
Sbjct: 388 EEEISVEEVDEPVSNHSASHSASEQ 412


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 68  PGVSIVKEDLKENETKPDFAAELARALP 95
           P   ++KE ++E + + D AA +   LP
Sbjct: 618 PAFKVIKELIEEKKLRGDEAASVIATLP 645


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.133    0.378 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,333
Number of Sequences: 2123
Number of extensions: 7203
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 7
length of query: 248
length of database: 516,269
effective HSP length: 62
effective length of query: 186
effective length of database: 384,643
effective search space: 71543598
effective search space used: 71543598
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 47 (23.0 bits)