Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000051-TA|BGIBMGA000051-PA|IPR012464|Protein of unknown
function DUF1676
(248 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13050.1 68416.m01626 transporter-related low similarity to a... 30 1.3
At5g53850.3 68418.m06693 haloacid dehalogenase-like hydrolase fa... 30 1.7
At5g53850.2 68418.m06691 haloacid dehalogenase-like hydrolase fa... 30 1.7
At5g53850.1 68418.m06692 haloacid dehalogenase-like hydrolase fa... 30 1.7
At4g38180.1 68417.m05390 far-red impaired responsive protein, pu... 29 2.9
At1g67500.1 68414.m07688 DNA polymerase family B protein similar... 29 2.9
At1g08560.1 68414.m00949 syntaxin-related protein KNOLLE (KN) / ... 29 2.9
At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR cla... 29 3.9
At3g53510.1 68416.m05908 ABC transporter family protein breast c... 29 3.9
At3g52140.1 68416.m05723 tetratricopeptide repeat (TPR)-containi... 29 3.9
At2g03280.1 68415.m00282 expressed protein contains Pfam PF03138... 27 9.0
>At3g13050.1 68416.m01626 transporter-related low similarity to
apical organic cation transporter [Sus scrofa]
GI:2062135, SP|Q02563 Synaptic vesicle protein 2 (SV2)
{Rattus norvegicus}; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 500
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 48 KIEAISMLEKLNGKQELKLLPGV--SIVKEDLKENETKPDFAAELARALPSKPDERIDKY 105
K EA+++LEK+ + +L PGV S ++ +L+EN+ P L +A S + K
Sbjct: 211 KAEALAILEKIARMNKTQLPPGVLSSELETELEENKNIPTENTHLLKAGESGEAVAVSKI 270
Query: 106 LL 107
+L
Sbjct: 271 VL 272
>At5g53850.3 68418.m06693 haloacid dehalogenase-like hydrolase
family protein low similarity to enolase-phosphatase E-1
enzyme [Klebsiella oxytoca] GI:401712; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 418
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 4 MYILTLAAAVVGLPNPEPKPTEPVEAT 30
MYIL+ +++ P+P+P P +P + T
Sbjct: 81 MYILSANGSIISTPSPKPYPNKPPKCT 107
>At5g53850.2 68418.m06691 haloacid dehalogenase-like hydrolase
family protein low similarity to enolase-phosphatase E-1
enzyme [Klebsiella oxytoca] GI:401712; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 507
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 4 MYILTLAAAVVGLPNPEPKPTEPVEAT 30
MYIL+ +++ P+P+P P +P + T
Sbjct: 81 MYILSANGSIISTPSPKPYPNKPPKCT 107
>At5g53850.1 68418.m06692 haloacid dehalogenase-like hydrolase
family protein low similarity to enolase-phosphatase E-1
enzyme [Klebsiella oxytoca] GI:401712; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 402
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 4 MYILTLAAAVVGLPNPEPKPTEPVEAT 30
MYIL+ +++ P+P+P P +P + T
Sbjct: 81 MYILSANGSIISTPSPKPYPNKPPKCT 107
>At4g38180.1 68417.m05390 far-red impaired responsive protein,
putative similar to far-red impaired response protein
FAR1 [Arabidopsis thaliana] gi|5764395|gb|AAD51282;
contains Pfam:PF03101 domain: FAR1 family and PF04434:
SWIM zinc finger
Length = 788
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Query: 103 DKYLLYSLGNYLDSHTVRLRLL 124
D Y L++ NYL+SHTVR L
Sbjct: 640 DDYNLHAYANYLESHTVRYNTL 661
>At1g67500.1 68414.m07688 DNA polymerase family B protein similar to
SP|Q61493 DNA polymerase zeta catalytic subunit (EC
2.7.7.7) {Mus musculus}; contains Pfam profile PF00136:
DNA polymerase family B
Length = 1890
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 77 LKENETKPDFAAELARALPSKPDER 101
L E PDF + RALPS PD +
Sbjct: 505 LDSQENLPDFGSSTKRALPSNPDSQ 529
>At1g08560.1 68414.m00949 syntaxin-related protein KNOLLE (KN) /
syntaxin 111 (SYP111) identical to SP|Q42374
Syntaxin-related protein KNOLLE (Syntaxin 111)
(AtSYP111) {Arabidopsis thaliana}; BAC F22O13 has a
deletion of a cytosine at position 7887
Length = 310
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 70 VSIVKEDLKENETKPDFAAELARALPSKPDERIDKYL 106
V + K +K+ E PDF E+A K DE + +L
Sbjct: 13 VDLKKAAMKDMEAGPDFDLEMASTKADKMDENLSSFL 49
>At4g27190.1 68417.m03905 disease resistance protein (NBS-LRR
class), putative domain signature NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 985
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Query: 49 IEAISMLEKLNGKQELKLLPGVSIVKEDLKENETKPDFAAELARALPSKPDERIDKYLLY 108
IE + ML + + ++ +PGVS+V + + N A++ L S+ ++I + +
Sbjct: 119 IEFVDMLSVESTPERVEHVPGVSVVHQTMASN-----MLAKIRDGLTSEKAQKIGVWGMG 173
Query: 109 SLGNYLDSHTVRLRLLDDGAAE 130
+G T+ +L ++GA +
Sbjct: 174 GVGKTTLVRTLNNKLREEGATQ 195
>At3g53510.1 68416.m05908 ABC transporter family protein breast
cancer resistance protein (BCRP), Homo sapiens,
EMBL:AF098951
Length = 739
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 77 LKENETKPDFAAELARALPSKPD 99
+ ENE KP+FA +L R L P+
Sbjct: 349 IPENENKPEFALDLIRELEDSPE 371
>At3g52140.1 68416.m05723 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515: TPR Domain
Length = 1403
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 8 TLAAAVVGLPNP-EPKPTEPVEATGRAKVDCNGGIFSPTCLKIEAISMLEKLNGKQELKL 66
TL A +P E PT P ++V+ N L++ +S+ + GK EL+L
Sbjct: 65 TLTAVDSAVPEANEVAPTIPKADESESQVENNDAQPKQGELRLYPVSVKTQSGGKMELQL 124
Query: 67 LPGVSIV 73
PG S++
Sbjct: 125 NPGDSVM 131
>At2g03280.1 68415.m00282 expressed protein contains Pfam PF03138:
Plant protein family. The function of this family of
plant proteins is unknown; previously annotated as ' axi
1 protein from Nicotiana tabacum -related' based on
similarity to axi 1 protein (GB:X80301) (GI:559920) from
[Nicotiana tabacum], which, due to scienitific fraud was
retracted. Retraction in: Schell J. EMBO J 1999 May
17;18(10):2908. PMID:10400497.
Length = 481
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 5 YILTLAAAVVGLPNPEPKPTEPVEATGRAKVDCNGGIFSPTCLKIEAISMLEKLN 59
+I + V +P P P P + G V CNGG+ + +++ LN
Sbjct: 64 HISRFSLPVQSVPLPPPLPPRNYTSNGILLVSCNGGLNQMRAAICDMVTVARLLN 118
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.133 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,714,358
Number of Sequences: 28952
Number of extensions: 177812
Number of successful extensions: 460
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 452
Number of HSP's gapped (non-prelim): 11
length of query: 248
length of database: 12,070,560
effective HSP length: 79
effective length of query: 169
effective length of database: 9,783,352
effective search space: 1653386488
effective search space used: 1653386488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
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