Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000049-TA|BGIBMGA000049-PA|IPR012464|Protein of unknown
function DUF1676
         (222 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR541711-1|CAG46512.1|  284|Homo sapiens ICMT protein.                 29   9.8  
CR541671-1|CAG46472.1|  284|Homo sapiens ICMT protein.                 29   9.8  
BC028168-1|AAH28168.1|  284|Homo sapiens isoprenylcysteine carbo...    29   9.8  
AL031847-5|CAI19441.1|  284|Homo sapiens isoprenylcysteine carbo...    29   9.8  
AF064084-1|AAC16554.1|  284|Homo sapiens prenylcysteine carboxyl...    29   9.8  

>CR541711-1|CAG46512.1|  284|Homo sapiens ICMT protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 140 LKALAFVSAKGLMMGFFSTVMASVLSLKGMFENSHAYQNRKDDTKTQV 187
           LK + ++S  GL+M  F   +            +H  QN K DT T V
Sbjct: 153 LKQITWLSVTGLLMVVFGECLRKAAMFTAGSNFNHVVQNEKSDTHTLV 200


>CR541671-1|CAG46472.1|  284|Homo sapiens ICMT protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 140 LKALAFVSAKGLMMGFFSTVMASVLSLKGMFENSHAYQNRKDDTKTQV 187
           LK + ++S  GL+M  F   +            +H  QN K DT T V
Sbjct: 153 LKQITWLSVTGLLMVVFGECLRKAAMFTAGSNFNHVVQNEKSDTHTLV 200


>BC028168-1|AAH28168.1|  284|Homo sapiens isoprenylcysteine carboxyl
           methyltransferase protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 140 LKALAFVSAKGLMMGFFSTVMASVLSLKGMFENSHAYQNRKDDTKTQV 187
           LK + ++S  GL+M  F   +            +H  QN K DT T V
Sbjct: 153 LKQITWLSVTGLLMVVFGECLRKAAMFTAGSNFNHVVQNEKSDTHTLV 200


>AL031847-5|CAI19441.1|  284|Homo sapiens isoprenylcysteine carboxyl
           methyltransferase protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 140 LKALAFVSAKGLMMGFFSTVMASVLSLKGMFENSHAYQNRKDDTKTQV 187
           LK + ++S  GL+M  F   +            +H  QN K DT T V
Sbjct: 153 LKQITWLSVTGLLMVVFGECLRKAAMFTAGSNFNHVVQNEKSDTHTLV 200


>AF064084-1|AAC16554.1|  284|Homo sapiens prenylcysteine carboxyl
           methyltransferase protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 140 LKALAFVSAKGLMMGFFSTVMASVLSLKGMFENSHAYQNRKDDTKTQV 187
           LK + ++S  GL+M  F   +            +H  QN K DT T V
Sbjct: 153 LKQITWLSVTGLLMVVFGECLRKAAMFTAGSNFNHVVQNEKSDTHTLV 200


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.135    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,723,054
Number of Sequences: 224733
Number of extensions: 811094
Number of successful extensions: 1258
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1253
Number of HSP's gapped (non-prelim): 5
length of query: 222
length of database: 73,234,838
effective HSP length: 87
effective length of query: 135
effective length of database: 53,683,067
effective search space: 7247214045
effective search space used: 7247214045
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)