Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000049-TA|BGIBMGA000049-PA|IPR012464|Protein of unknown
function DUF1676
(222 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70854-3|AAP40537.1| 450|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 30 1.1
U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical pr... 29 2.0
U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 28 4.6
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 4.6
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 4.6
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 4.6
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 28 4.6
Z81537-9|CAB04376.2| 673|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81537-5|CAB04381.2| 673|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical pr... 27 8.1
>U70854-3|AAP40537.1| 450|Caenorhabditis elegans Hypothetical
protein F38A5.2b protein.
Length = 450
Score = 31.5 bits (68), Expect = 0.50
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 140 LKALAFVSAKGLMMGFFSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTED 198
+++L S KGL+ G T S++SL N + DD + E+ Q P TED
Sbjct: 37 MRSLTINSKKGLVGGASETAEQSIISLADSTSNFDEHVG--DDAELDYELEQAPEATED 93
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 171 ENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLNAPRDNI 221
E + N + D+ E ++ P K YDEH R GD + P I
Sbjct: 466 ERRRSGSNPRRDSHVSFETLEAPPKPPRRSKYDEHIRIGDPIATSTPMTTI 516
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
protein T04F3.1 protein.
Length = 3517
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/51 (29%), Positives = 21/51 (41%)
Query: 171 ENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLNAPRDNI 221
E + N + D+ E ++ P K YDEH R GD + P I
Sbjct: 466 ERRRSGSNPRRDSHVSFETLEAPPKPPRRSKYDEHIRIGDPIATSTPMTTI 516
>U41107-5|AAN39671.1| 543|Caenorhabditis elegans Hypothetical
protein F55C12.5c protein.
Length = 543
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 116 MHKKYVMPVILGLLAAKSLLIPIALKALAFVSAKGLMMGFFSTVM 160
+HK V+P L LI + + F++ GLM GF+STV+
Sbjct: 212 IHKCRVLPFFRARLVVFGSLIALTIACPGFIT--GLMWGFYSTVI 254
>U41107-4|AAK73878.1| 876|Caenorhabditis elegans Hypothetical
protein F55C12.5a protein.
Length = 876
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 116 MHKKYVMPVILGLLAAKSLLIPIALKALAFVSAKGLMMGFFSTVM 160
+HK V+P L LI + + F++ GLM GF+STV+
Sbjct: 163 IHKCRVLPFFRARLVVFGSLIALTIACPGFIT--GLMWGFYSTVI 205
>U41107-3|AAK73879.1| 925|Caenorhabditis elegans Hypothetical
protein F55C12.5b protein.
Length = 925
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 116 MHKKYVMPVILGLLAAKSLLIPIALKALAFVSAKGLMMGFFSTVM 160
+HK V+P L LI + + F++ GLM GF+STV+
Sbjct: 212 IHKCRVLPFFRARLVVFGSLIALTIACPGFIT--GLMWGFYSTVI 254
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 156 FSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLN 215
FS V K + EN H KD + V ++ VP E + DE ++ G
Sbjct: 3389 FSAVRGDTGVYKIIVENEHG----KDTAQCNVTVLDVPGTPEGPLKIDEIHKEGCTLNWK 3444
Query: 216 APRDN 220
P DN
Sbjct: 3445 PPTDN 3449
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 156 FSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLN 215
FS V K + EN H KD + V ++ VP E + DE ++ G
Sbjct: 3918 FSAVRGDTGVYKIIVENEHG----KDTAQCNVTVLDVPGTPEGPLKIDEIHKEGCTLNWK 3973
Query: 216 APRDN 220
P DN
Sbjct: 3974 PPTDN 3978
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 156 FSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLN 215
FS V K + EN H KD + V ++ VP E + DE ++ G
Sbjct: 3599 FSAVRGDTGVYKIIVENEHG----KDTAQCNVTVLDVPGTPEGPLKIDEIHKEGCTLNWK 3654
Query: 216 APRDN 220
P DN
Sbjct: 3655 PPTDN 3659
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 156 FSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLN 215
FS V K + EN H KD + V ++ VP E + DE ++ G
Sbjct: 3389 FSAVRGDTGVYKIIVENEHG----KDTAQCNVTVLDVPGTPEGPLKIDEIHKEGCTLNWK 3444
Query: 216 APRDN 220
P DN
Sbjct: 3445 PPTDN 3449
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 156 FSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLN 215
FS V K + EN H KD + V ++ VP E + DE ++ G
Sbjct: 3918 FSAVRGDTGVYKIIVENEHG----KDTAQCNVTVLDVPGTPEGPLKIDEIHKEGCTLNWK 3973
Query: 216 APRDN 220
P DN
Sbjct: 3974 PPTDN 3978
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 156 FSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLN 215
FS V K + EN H KD + V ++ VP E + DE ++ G
Sbjct: 3599 FSAVRGDTGVYKIIVENEHG----KDTAQCNVTVLDVPGTPEGPLKIDEIHKEGCTLNWK 3654
Query: 216 APRDN 220
P DN
Sbjct: 3655 PPTDN 3659
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/65 (29%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Query: 156 FSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVYYDEHYRRGDLAPLN 215
FS V K + EN H KD + V ++ VP E + DE ++ G
Sbjct: 2808 FSAVRGDTGVYKIIVENEHG----KDTAQCNVTVLDVPGTPEGPLKIDEIHKEGCTLNWK 2863
Query: 216 APRDN 220
P DN
Sbjct: 2864 PPTDN 2868
>Z81537-9|CAB04376.2| 673|Caenorhabditis elegans Hypothetical
protein F41D3.10 protein.
Length = 673
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/53 (20%), Positives = 28/53 (52%)
Query: 149 KGLMMGFFSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVY 201
K ++ + ++ S++SL +F ++ N+K T+ + + PT +D+ +
Sbjct: 76 KRILPLYLLIILLSMISLYTIFPDTSIETNQKSATRAMLFVSNAPTSAQDNYF 128
>Z81537-5|CAB04381.2| 673|Caenorhabditis elegans Hypothetical
protein F41D3.5 protein.
Length = 673
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/53 (20%), Positives = 28/53 (52%)
Query: 149 KGLMMGFFSTVMASVLSLKGMFENSHAYQNRKDDTKTQVEIIQVPTKTEDHVY 201
K ++ + ++ S++SL +F ++ N+K T+ + + PT +D+ +
Sbjct: 76 KRILPLYLLIILLSMISLYTIFPDTSIETNQKSATRAMLFVSNAPTSAQDNYF 128
>Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 118 KKYVMPVILGLLAAKSLLIPIALKALAFVS---AKGLMMGFFSTVMASVLSLKGM 169
K Y+ P ILGL +A S + I A F + GL+ GF V+A+V GM
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGF---VVATVSPAVGM 201
>Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Query: 118 KKYVMPVILGLLAAKSLLIPIALKALAFVS---AKGLMMGFFSTVMASVLSLKGM 169
K Y+ P ILGL +A S + I A F + GL+ GF V+A+V GM
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGF---VVATVSPAVGM 201
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.135 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,312,184
Number of Sequences: 27539
Number of extensions: 150138
Number of successful extensions: 420
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 416
Number of HSP's gapped (non-prelim): 17
length of query: 222
length of database: 12,573,161
effective HSP length: 79
effective length of query: 143
effective length of database: 10,397,580
effective search space: 1486853940
effective search space used: 1486853940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -