GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000048-TA|BGIBMGA000048-PA|undefined
         (272 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069289-1|AAL39434.1| 1137|Drosophila melanogaster GM14421p pro...    29   6.8  
AE014298-2419|AAF48620.1| 1137|Drosophila melanogaster CG9902-PA...    29   6.8  

>AY069289-1|AAL39434.1| 1137|Drosophila melanogaster GM14421p
           protein.
          Length = 1137

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 54  IQPSSYSRPKTQNRKYAFRP--RAIPLKKEEPQIERNAYYS--QDNMKNYKSEALFPGDY 109
           I+ S  S P+T NR+++ +P  +  P    +P+ ++   +S  +D + +  SE  + G+ 
Sbjct: 775 IKLSEMSFPETSNRRFSTQPVVKEQPKIAVQPKKQKTVLFSKEEDEVSSSDSEPCYTGN- 833

Query: 110 VPIATEKXXXXXXXXXXXXPFQPQTIPLIRNEEFQKRSLDVNEEPII 156
                 +                 + P   N+ F  RS+ VNE+P I
Sbjct: 834 ----GRRTQMRAAAIAAKAKLSEISSPETSNKHFSTRSI-VNEQPRI 875


>AE014298-2419|AAF48620.1| 1137|Drosophila melanogaster CG9902-PA
           protein.
          Length = 1137

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 10/107 (9%)

Query: 54  IQPSSYSRPKTQNRKYAFRP--RAIPLKKEEPQIERNAYYS--QDNMKNYKSEALFPGDY 109
           I+ S  S P+T NR+++ +P  +  P    +P+ ++   +S  +D + +  SE  + G+ 
Sbjct: 775 IKLSEMSFPETSNRRFSTQPVVKEQPKIAVQPKKQKTVLFSKEEDEVSSSDSEPCYTGN- 833

Query: 110 VPIATEKXXXXXXXXXXXXPFQPQTIPLIRNEEFQKRSLDVNEEPII 156
                 +                 + P   N+ F  RS+ VNE+P I
Sbjct: 834 ----GRRTQMRAAAIAAKAKLSEISSPETSNKHFSTRSI-VNEQPRI 875


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.317    0.133    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,408,444
Number of Sequences: 52641
Number of extensions: 268046
Number of successful extensions: 676
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 676
Number of HSP's gapped (non-prelim): 2
length of query: 272
length of database: 24,830,863
effective HSP length: 84
effective length of query: 188
effective length of database: 20,409,019
effective search space: 3836895572
effective search space used: 3836895572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)