GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000047-TA|BGIBMGA000047-PA|IPR012464|Protein of unknown
function DUF1676
         (178 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    26   0.76 
AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    24   3.1  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    23   4.1  

>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 25.8 bits (54), Expect = 0.76
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 71  SKTDENVPISENEIDAALPRNLQDKNEALTQ 101
           S+ DEN+    + +DA  P +LQ + E L +
Sbjct: 107 SEEDENLRAPRDFLDAGKPNDLQQEGETLNK 137


>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 18  EDLSYKYLTKVYDECQKSDAILPCLKKKAILFFDR 52
           E L Y Y     + CQ SD +  C K    +  DR
Sbjct: 73  EPLPYMYACPGTEPCQSSDRLGSCSKSMHDVLCDR 107


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/24 (41%), Positives = 17/24 (70%)

Query: 72  KTDENVPISENEIDAALPRNLQDK 95
           K + NVP +  ++DA LP +++DK
Sbjct: 93  KGEINVPKTLAQMDAMLPPDMRDK 116


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.375 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,818
Number of Sequences: 2123
Number of extensions: 3882
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 178
length of database: 516,269
effective HSP length: 60
effective length of query: 118
effective length of database: 388,889
effective search space: 45888902
effective search space used: 45888902
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 45 (22.2 bits)