Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000043-TA|BGIBMGA000043-PA|undefined
(163 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49) 27 5.7
SB_14913| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 5.7
SB_12967| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 5.7
SB_35761| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 5.7
SB_34445| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 5.7
SB_27561| Best HMM Match : DUF720 (HMM E-Value=0.47) 27 5.7
SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_6312| Best HMM Match : DUF720 (HMM E-Value=0.86) 27 5.7
SB_3966| Best HMM Match : DUF720 (HMM E-Value=0.24) 27 7.6
SB_59641| Best HMM Match : PAE (HMM E-Value=0) 27 7.6
>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
Length = 1205
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 38 KTLENGRSFDNSVLYRMAKFLQGHELHIKLPKLIEKDRVAQIFAQSLKVVDETYKENGVT 97
K L ++ + ++ +FL H L P+ + +D A + LK K+ G+T
Sbjct: 1145 KVLAKRKNIQSDLVAWEKQFLFDHNLTAPTPQFMNEDSTASALLKQLKYASALLKQWGIT 1204
>SB_14913| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 528
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 38 KTLENGRSFDNSVLYRMAKFLQGHELHIKLPKLIEKDRVAQIFAQSLKVVDETYKENGVT 97
K L ++ + ++ +FL H L P+ + +D A + LK K+ G+T
Sbjct: 468 KVLAKRKNIQSDLVAWEKQFLFDHNLTAPTPQFMNEDSTASALLKQLKYASALLKQWGIT 527
>SB_12967| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 227
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 38 KTLENGRSFDNSVLYRMAKFLQGHELHIKLPKLIEKDRVAQIFAQSLKVVDETYKENGVT 97
K L ++ + ++ +FL H L P+ + +D A + LK K+ G+T
Sbjct: 167 KVLAKRKNIQSDLVAWEKQFLFDHNLTAPTPQFMNEDSTASALLKQLKYASALLKQWGIT 226
>SB_35761| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 414
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 38 KTLENGRSFDNSVLYRMAKFLQGHELHIKLPKLIEKDRVAQIFAQSLKVVDETYKENGVT 97
K L ++ + ++ +FL H L P+ + +D A + LK K+ G+T
Sbjct: 354 KVLAKRKNIQSDLVAWEKQFLFDHNLTAPTPQFMNEDSTASALLKQLKYASALLKQWGIT 413
>SB_34445| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 371
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 38 KTLENGRSFDNSVLYRMAKFLQGHELHIKLPKLIEKDRVAQIFAQSLKVVDETYKENGVT 97
K L ++ + ++ +FL H L P+ + +D A + LK K+ G+T
Sbjct: 311 KVLAKRKNIQSDLVAWEKQFLFDHNLTAPTPQFMNEDSTASALLKQLKYASALLKQWGIT 370
>SB_27561| Best HMM Match : DUF720 (HMM E-Value=0.47)
Length = 779
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 38 KTLENGRSFDNSVLYRMAKFLQGHELHIKLPKLIEKDRVAQIFAQSLKVVDETYKENGVT 97
K L ++ + ++ +FL H L P+ + +D A + LK K+ G+T
Sbjct: 719 KVLAKRKNIQSDLVAWEKQFLFDHNLTAPTPQFMNEDSTASALLKQLKYASALLKQWGIT 778
>SB_19755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 38 KTLENGRSFDNSVLYRMAKFLQGHELHIKLPKLIEKDRVAQIFAQSLKVVDETYKENGVT 97
K L ++ + ++ +FL H L P+ + +D A + LK K+ G+T
Sbjct: 561 KVLAKRKNIQSDLVAWEKQFLFDHNLTAPTPQFMNEDSTASALLKQLKYASALLKQWGIT 620
>SB_6312| Best HMM Match : DUF720 (HMM E-Value=0.86)
Length = 179
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 38 KTLENGRSFDNSVLYRMAKFLQGHELHIKLPKLIEKDRVAQIFAQSLKVVDETYKENGVT 97
K L ++ + ++ +FL H L P+ + +D A + LK K+ G+T
Sbjct: 119 KVLAKRKNIQSDLVEWEKQFLFDHNLTAPTPQFMNEDSTASALLKQLKYASALLKQWGIT 178
>SB_3966| Best HMM Match : DUF720 (HMM E-Value=0.24)
Length = 250
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 38 KTLENGRSFDNSVLYRMAKFLQGHELHIKLPKLIEKDRVAQIFAQSLKVVDETYKENGVT 97
K L ++ + ++ +FL H L P+ + +D A + LK K+ G+T
Sbjct: 190 KILAKRKNIQSDLVAWEKQFLFDHNLTAPTPQFMNEDSTASALLKQLKYASALLKQWGIT 249
>SB_59641| Best HMM Match : PAE (HMM E-Value=0)
Length = 1252
Score = 27.1 bits (57), Expect = 7.6
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 2/101 (1%)
Query: 14 ALGSFLDKDIDLADGVKLVSIPVPKTLENGRSFDNSVLYRMAKFLQGHELHIKLPK--LI 71
++G+ LD D ++ P L ++ + +Y+ +FLQ H+ LP+ ++
Sbjct: 691 SIGALLDSHKPSEDEDLIIESPRGLRLVELQNKKHGEVYKHWEFLQDPPSHLALPRKDIV 750
Query: 72 EKDRVAQIFAQSLKVVDETYKENGVTGRGKGDGSGGVALLG 112
+ QI + + YK + D G A +G
Sbjct: 751 QDQATIQIIDDAGNICRAGYKNTADSVYRLADTKGNTAEMG 791
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.140 0.429
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,198,692
Number of Sequences: 59808
Number of extensions: 175638
Number of successful extensions: 500
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 491
Number of HSP's gapped (non-prelim): 10
length of query: 163
length of database: 16,821,457
effective HSP length: 77
effective length of query: 86
effective length of database: 12,216,241
effective search space: 1050596726
effective search space used: 1050596726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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