GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000042-TA|BGIBMGA000042-PA|IPR012464|Protein of unknown
function DUF1676
         (212 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS...    25   1.3  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          25   1.7  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          25   1.7  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          25   1.7  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          25   1.7  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    23   6.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.0  

>Z69977-1|CAA93817.1|  151|Anopheles gambiae ribosomal protein RS11
           protein.
          Length = 151

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 124 MSGKENNDGNFGIGVSLKAPKAIETGRRQNKIGPFIGLAAMKIGVLGALFFKGLTLM 180
           +S K+    +  IG+  K PK   TG   +K  PF G  +++  +L  +  K + L+
Sbjct: 23  VSRKKGLRMHHSIGLGFKTPKEAITGTYIDKKCPFTGHISIRGRILTGVVRKCIVLL 79


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 59  QISDDVL----IVDESNGAAASLPV-KPESLARAGSTIEDQAQQLIMDKLWNFATTRSLR 113
           Q SDD L    +V+E        PV KP  + +   +   +A    M++L +      L+
Sbjct: 64  QFSDDTLKEAKMVEEQILRLLKEPVAKPSDMVKQEVSKRCKALASFMEELMDEVAQPELK 123

Query: 114 YRLLNNADLVMSGKEN 129
             LLN +D   S +++
Sbjct: 124 LNLLNESDFTFSERDS 139


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 59  QISDDVL----IVDESNGAAASLPV-KPESLARAGSTIEDQAQQLIMDKLWNFATTRSLR 113
           Q SDD L    +V+E        PV KP  + +   +   +A    M++L +      L+
Sbjct: 64  QFSDDTLKEAKMVEEQILRLLKEPVAKPSDMVKQEVSKRCKALASFMEELMDEVAQPELK 123

Query: 114 YRLLNNADLVMSGKEN 129
             LLN +D   S +++
Sbjct: 124 LNLLNESDFTFSERDS 139


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 59  QISDDVL----IVDESNGAAASLPV-KPESLARAGSTIEDQAQQLIMDKLWNFATTRSLR 113
           Q SDD L    +V+E        PV KP  + +   +   +A    M++L +      L+
Sbjct: 64  QFSDDTLKEAKMVEEQILRLLKEPVAKPSDMVKQEVSKRCKALASFMEELMDEVAQPELK 123

Query: 114 YRLLNNADLVMSGKEN 129
             LLN +D   S +++
Sbjct: 124 LNLLNESDFTFSERDS 139


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 59  QISDDVL----IVDESNGAAASLPV-KPESLARAGSTIEDQAQQLIMDKLWNFATTRSLR 113
           Q SDD L    +V+E        PV KP  + +   +   +A    M++L +      L+
Sbjct: 64  QFSDDTLKEAKMVEEQILRLLKEPVAKPSDMVKQEVSKRCKALASFMEELMDEVAQPELK 123

Query: 114 YRLLNNADLVMSGKEN 129
             LLN +D   S +++
Sbjct: 124 LNLLNESDFTFSERDS 139


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 11/36 (30%), Positives = 20/36 (55%)

Query: 51  RMLKTAAVQISDDVLIVDESNGAAASLPVKPESLAR 86
           R L   AV++   +++  E++     + V PESLA+
Sbjct: 763 RKLGEMAVRVKASIMLGHETDALEKVIRVMPESLAQ 798


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 15/60 (25%), Positives = 31/60 (51%)

Query: 58   VQISDDVLIVDESNGAAASLPVKPESLARAGSTIEDQAQQLIMDKLWNFATTRSLRYRLL 117
            + I+ ++L+  +   +AAS  +   +  +A +T  D  Q+ + +K  N      LRY++L
Sbjct: 1671 IPIAWELLLETDQEVSAASAALFILASVKAPNTATDIMQRSLKNKCPNTRIQAILRYQVL 1730



 Score = 22.6 bits (46), Expect = 9.0
 Identities = 14/50 (28%), Positives = 23/50 (46%)

Query: 70   SNGAAASLPVKPESLARAGSTIEDQAQQLIMDKLWNFATTRSLRYRLLNN 119
            S+G  ++ P+ P+SLA   S       +L   +  +  T R+ R    NN
Sbjct: 3137 SSGETSTTPLSPDSLADDSSGENHNKHRLQRSRAQSRKTFRNRRGMRSNN 3186


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.134    0.379 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,800
Number of Sequences: 2123
Number of extensions: 6364
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 8
length of query: 212
length of database: 516,269
effective HSP length: 61
effective length of query: 151
effective length of database: 386,766
effective search space: 58401666
effective search space used: 58401666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 46 (22.6 bits)