GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000041-TA|BGIBMGA000041-PA|undefined
         (60 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    22   2.5  
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    21   4.3  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 8/14 (57%), Positives = 9/14 (64%)

Query: 34  WASNRAYSPKNRPS 47
           WASN+ Y   N PS
Sbjct: 974 WASNKEYLAYNSPS 987


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query: 42  PKNRPSPAPMYITAPG 57
           P + PSPA  Y   PG
Sbjct: 326 PADGPSPAGPYTNVPG 341


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.313    0.126    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,169
Number of Sequences: 2123
Number of extensions: 658
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 60
length of database: 516,269
effective HSP length: 39
effective length of query: 21
effective length of database: 433,472
effective search space:  9102912
effective search space used:  9102912
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)
S2: 39 (19.8 bits)