SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000040-TA|BGIBMGA000040-PA|undefined
         (142 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RI76 Cluster: Putative uncharacterized protein PY0375...    40   0.026
UniRef50_Q9VNM3 Cluster: CG1148-PA, isoform A; n=4; Diptera|Rep:...    39   0.034
UniRef50_UPI00015B5357 Cluster: PREDICTED: hypothetical protein;...    36   0.24 
UniRef50_UPI0001509CC7 Cluster: jmjC domain containing protein; ...    36   0.32 
UniRef50_Q8KU71 Cluster: Sensor protein; n=2; Enterococcus faeca...    34   1.3  
UniRef50_Q9UNS2 Cluster: COP9 signalosome complex subunit 3; n=3...    34   1.3  
UniRef50_Q16SC8 Cluster: Putative uncharacterized protein; n=1; ...    33   3.0  
UniRef50_A1C4P6 Cluster: Putative uncharacterized protein; n=3; ...    33   3.0  
UniRef50_UPI00015B525C Cluster: PREDICTED: similar to ENSANGP000...    32   4.0  
UniRef50_Q189M5 Cluster: Putative uncharacterized protein; n=3; ...    32   4.0  
UniRef50_A7TRZ3 Cluster: Putative uncharacterized protein; n=1; ...    32   4.0  
UniRef50_UPI00006D0034 Cluster: hypothetical protein TTHERM_0076...    32   5.2  
UniRef50_A5G7E6 Cluster: Radical SAM domain protein; n=1; Geobac...    32   5.2  
UniRef50_A0RNB8 Cluster: Methyl-accepting chemotaxis protein; n=...    32   5.2  
UniRef50_A6RQ96 Cluster: Putative uncharacterized protein; n=1; ...    32   5.2  
UniRef50_UPI0000D57760 Cluster: PREDICTED: similar to leucine-ri...    31   6.9  
UniRef50_UPI0000D571AF Cluster: PREDICTED: similar to CG1148-PB,...    31   6.9  
UniRef50_Q7RQE2 Cluster: Dentin phosphoryn, putative; n=7; Plasm...    31   6.9  
UniRef50_Q03F73 Cluster: DNA polymerase III, alpha subunit; n=1;...    31   9.1  
UniRef50_A0NXT4 Cluster: Putative uncharacterized protein; n=1; ...    31   9.1  
UniRef50_Q8IDM0 Cluster: Putative uncharacterized protein MAL13P...    31   9.1  
UniRef50_Q6LFI3 Cluster: Putative uncharacterized protein; n=1; ...    31   9.1  
UniRef50_Q22ND6 Cluster: Helicase conserved C-terminal domain co...    31   9.1  
UniRef50_A1CYG2 Cluster: Cellobiose dehydrogenase, putative; n=8...    31   9.1  
UniRef50_Q9I1M1 Cluster: 2-oxoisovalerate dehydrogenase subunit ...    31   9.1  

>UniRef50_Q7RI76 Cluster: Putative uncharacterized protein PY03753;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY03753 - Plasmodium yoelii
           yoelii
          Length = 585

 Score = 39.5 bits (88), Expect = 0.026
 Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 46  KGLKVIKETFFG-DNNNETIKTNLFSLVPLDVE-TINSLGVKKTVRDVKPRGFLSEWAEF 103
           KGLK IKE +    N N+ +K N FS +  D+E     + +  TV + K + ++SE    
Sbjct: 391 KGLKNIKEAYIKIKNENQQLKKNAFSFIQKDIEQNYVPINIHNTVLNEK-KTYISEIDIL 449

Query: 104 AKYLMRLVQDFLNVKGLKVEIPEGARTVEEETAD 137
              + +   D  N+   K E+ E  + + ++  D
Sbjct: 450 KSKVKKSENDITNLSKEKSELSEKLKKINQQNED 483


>UniRef50_Q9VNM3 Cluster: CG1148-PA, isoform A; n=4; Diptera|Rep:
           CG1148-PA, isoform A - Drosophila melanogaster (Fruit
           fly)
          Length = 390

 Score = 39.1 bits (87), Expect = 0.034
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 23  DGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVETINSL 82
           D +L     +C + G+   C K + L    E FF D       ++   +V L      SL
Sbjct: 81  DPFLARTNSNC-LGGDLSECFKTQALNTFDEIFFKDQYK---LSDFARVVRLPETQQRSL 136

Query: 83  GVKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVKGLKVEIPE 126
             +      +PRG   EW +  KY +R  + F+    L+VE PE
Sbjct: 137 LQEPFEYSEEPRGDDDEWNQLLKYGLRRAERFIKSTALEVEWPE 180


>UniRef50_UPI00015B5357 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 303

 Score = 36.3 bits (80), Expect = 0.24
 Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 14/136 (10%)

Query: 10  MATLQLSRSNVTEDGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLF 69
           ++  Q++R++ T D ++ + +  C +    ++C KY+ +K I         N  ++   +
Sbjct: 32  LSLCQVARNDTTPDVFIEHCRKECAIYKNMMACGKYRAIKWI---------NNVVQEKEY 82

Query: 70  SLVPLDVETINSLGVKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVKGL--KVEIPEG 127
              P  +  I ++   + + ++ PR   S  AE   ++   V+D L  + L   V  P G
Sbjct: 83  VYGPFKIIKIPAVQGVRILPEL-PRVKKSNAAEMLHFIRESVEDLLTRRALVYTVNQPSG 141

Query: 128 ARTVEE--ETADDGEL 141
           AR+        DD EL
Sbjct: 142 ARSFSNGLMVLDDDEL 157


>UniRef50_UPI0001509CC7 Cluster: jmjC domain containing protein;
           n=1; Tetrahymena thermophila SB210|Rep: jmjC domain
           containing protein - Tetrahymena thermophila SB210
          Length = 559

 Score = 35.9 bits (79), Expect = 0.32
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 1/97 (1%)

Query: 37  GEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVETINSLGVKKTVRDVKPRGF 96
           GEA++ V  + +K  KE  F        K   FSL  + V  I +L    +   V  +  
Sbjct: 396 GEAVNIVTPEWIKFYKEAKFDYARKGFQKKVSFSLAWVLVSIIQNLQ-DSSFDKVTLQNI 454

Query: 97  LSEWAEFAKYLMRLVQDFLNVKGLKVEIPEGARTVEE 133
           L EW E  K  +   +D +N+ G K++I E A   E+
Sbjct: 455 LHEWQEIEKEELHKRKDLINIYGKKLKIYEFANKNEK 491


>UniRef50_Q8KU71 Cluster: Sensor protein; n=2; Enterococcus
           faecalis|Rep: Sensor protein - Enterococcus faecalis
           (Streptococcus faecalis)
          Length = 856

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 11/119 (9%)

Query: 22  EDGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVET--- 78
           E+  L Y+K    V  +    ++   LK  KE    +N  E +++NL   V  D+ T   
Sbjct: 599 ENDQLNYLK---LVLTQIAVILEQTELKDEKEQVELENEREKVRSNLLRAVSHDLRTPLT 655

Query: 79  -----INSLGVKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVKGLKVEIPEGARTVE 132
                  +LG+   +++   R  L +  E +++L+R+V++ L++  + ++  +  +T E
Sbjct: 656 VISGIAETLGIGNDLKEETQRKLLKDIQEESQWLIRMVENLLSITRINMDTMKVNKTAE 714


>UniRef50_Q9UNS2 Cluster: COP9 signalosome complex subunit 3; n=34;
           Coelomata|Rep: COP9 signalosome complex subunit 3 - Homo
           sapiens (Human)
          Length = 423

 Score = 33.9 bits (74), Expect = 1.3
 Identities = 18/61 (29%), Positives = 33/61 (54%)

Query: 53  ETFFGDNNNETIKTNLFSLVPLDVETINSLGVKKTVRDVKPRGFLSEWAEFAKYLMRLVQ 112
           ETF  DNN   +K  L SL   +++ +    +  +++D+  R  LS   E  KY++ +++
Sbjct: 284 ETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIE 343

Query: 113 D 113
           D
Sbjct: 344 D 344


>UniRef50_Q16SC8 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 365

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 4/104 (3%)

Query: 23  DGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVETINSL 82
           D YL      C + GE   C K + L    + F  D    T    +  L    + +    
Sbjct: 80  DPYLARTNAQC-LNGELADCFKSQALNTFTDFFAKDVYQLTSNARITRLPETQLRSFQQD 138

Query: 83  GVKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVKGLKVEIPE 126
             + +    +PR   SEW +  K+ +R ++ F+    L+ +IP+
Sbjct: 139 PFEYSE---EPRQLDSEWDQLYKFGLRQLERFVKSTALEFQIPD 179


>UniRef50_A1C4P6 Cluster: Putative uncharacterized protein; n=3;
           Trichocomaceae|Rep: Putative uncharacterized protein -
           Aspergillus clavatus
          Length = 391

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 84  VKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVKGLKVEIPEGARTVEEETAD 137
           + KT+R    +G   EW +   Y+   ++D+  + GL  +I   A  +  E  D
Sbjct: 58  ILKTLRAKNYQGSHDEWVQIISYVFGQLKDYTKISGLVSDIESSANVLPTENGD 111


>UniRef50_UPI00015B525C Cluster: PREDICTED: similar to
          ENSANGP00000015501; n=1; Nasonia vitripennis|Rep:
          PREDICTED: similar to ENSANGP00000015501 - Nasonia
          vitripennis
          Length = 252

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 23 DGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDN--NNETIKTNLFSLVPLDVETIN 80
          D  +   K  C  K + ISC+K+K L ++ + F  DN   +ET++    S  P+D  +  
Sbjct: 33 DAMVEQTKLECSQKNDEISCMKFKILNLLDQLFRKDNFKVSETVEVTRNS-YPVDELSGR 91

Query: 81 SLG 83
          SLG
Sbjct: 92 SLG 94


>UniRef50_Q189M5 Cluster: Putative uncharacterized protein; n=3;
           Clostridium difficile|Rep: Putative uncharacterized
           protein - Clostridium difficile (strain 630)
          Length = 475

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 52  KETFFGDNNNETIKT---NLFSLVPLDVETINSLGVKKTVRDVKPRGFLSEWAEFAKYLM 108
           K  F G++N  + K    +   + P+ V   N    K+T R+ +  GF S++ +F  Y+M
Sbjct: 104 KVIFKGEDNMSSTKIYYGDSLEVTPVGVMDYNDFS-KQTKREQEIPGFDSKYRDFVDYIM 162

Query: 109 RLVQDFLNVKGLKV 122
           ++  +    KG+ V
Sbjct: 163 KITHNIWEEKGIGV 176


>UniRef50_A7TRZ3 Cluster: Putative uncharacterized protein; n=1;
            Vanderwaltozyma polyspora DSM 70294|Rep: Putative
            uncharacterized protein - Vanderwaltozyma polyspora DSM
            70294
          Length = 3128

 Score = 32.3 bits (70), Expect = 4.0
 Identities = 16/58 (27%), Positives = 33/58 (56%)

Query: 61   NETIKTNLFSLVPLDVETINSLGVKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVK 118
            +ET +  +++++PL++ +I    V  +   +KP G   +W+E   Y   L+ D L+V+
Sbjct: 1982 SETSEETVYTILPLEIRSIPIEKVYYSKIHIKPSGSEFDWSEQTLYWKDLLSDPLSVQ 2039


>UniRef50_UPI00006D0034 Cluster: hypothetical protein
           TTHERM_00760650; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00760650 - Tetrahymena
           thermophila SB210
          Length = 1098

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 15  LSRSNVTEDGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIK-TNLFSLVP 73
           L+ SN  +   L Y ++S  VK +    + +K  +V KE FF D+    IK  N + L  
Sbjct: 651 LNFSNQKQQSQLFY-QNSYQVKTQEHLSLNFKSNQVSKENFFDDSQRNQIKQNNFYDLNQ 709

Query: 74  LDVETINSLGV 84
           L  +  N  G+
Sbjct: 710 LSPDLSNKFGI 720


>UniRef50_A5G7E6 Cluster: Radical SAM domain protein; n=1; Geobacter
           uraniumreducens Rf4|Rep: Radical SAM domain protein -
           Geobacter uraniumreducens Rf4
          Length = 347

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 10  MATLQLSRSNVTEDGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLF 69
           +AT +L    V+ DG      D+  ++G+ +     + +K++  T    + N  + T   
Sbjct: 107 LATTRLVAIQVSMDGATAETCDA--IRGKGVYHKAIEAIKLLAATSIPTSINTVLTTQNA 164

Query: 70  SLVPLDVETINSLGVKKTVRDVKPRG 95
           S +P   E  +SLGV   V   +P G
Sbjct: 165 SQIPAMYEMAHSLGVSLRVSRFRPSG 190


>UniRef50_A0RNB8 Cluster: Methyl-accepting chemotaxis protein;
          n=4; Campylobacterales|Rep: Methyl-accepting chemotaxis
          protein - Campylobacter fetus subsp. fetus (strain
          82-40)
          Length = 361

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 34 FVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVETINSLGVKKT 87
          F K  +I+  +YK   V+ E     N NE++K+ L  L  +  ETI ++  K+T
Sbjct: 3  FSKNSSITETEYKN--VVNENLKLQNENESLKSELKKLQDVSNETIKNIDAKET 54


>UniRef50_A6RQ96 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 675

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)

Query: 74  LDVETINSLGVKKTVRDVKPR-GFLSEWAEFAKYLMRLVQDFLNVKGLKVEIPEGARTVE 132
           LD+ T+ S+  K  +  + P  GFLSE AEFA+ + R     + V G ++    G + + 
Sbjct: 62  LDISTLISIVQKHNIDTIHPGYGFLSESAEFAERMWREANAIVIVPGSQILERTGDKLMA 121

Query: 133 EETADD 138
              A +
Sbjct: 122 RNLAQE 127


>UniRef50_UPI0000D57760 Cluster: PREDICTED: similar to leucine-rich
           repeats and immunoglobulin-like domains 2; n=1;
           Tribolium castaneum|Rep: PREDICTED: similar to
           leucine-rich repeats and immunoglobulin-like domains 2 -
           Tribolium castaneum
          Length = 756

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 38  EAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVETINSLGVKKTVRDVKPRGFL 97
           ++IS   + GLK +      DNN  +I+ N FS VPL  + +  +     + D   R F 
Sbjct: 218 KSISKNAFIGLKNVTYLNLNDNNITSIQMNAFSEVPLLSDLV--INTTYLLCDCNIRWFY 275

Query: 98  SEWAEFAKYLMRLV---QDFLNVKGLKVEIPEGARTVEE 133
            EW +  ++ +R +    ++L  + L VEIP    T +E
Sbjct: 276 -EWLDTKQFKIRAICAYPEWLRGQSL-VEIPTSNFTCDE 312


>UniRef50_UPI0000D571AF Cluster: PREDICTED: similar to CG1148-PB,
           isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG1148-PB, isoform B - Tribolium castaneum
          Length = 319

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 11/127 (8%)

Query: 23  DGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVETINSL 82
           D YL     +C ++G+   C K + L  + + F   N  +   T    ++ +    +  L
Sbjct: 50  DPYLAKTNAAC-LEGDLAECFKSRALASLDDFF---NKPQYSLTEHVRILRMPQTQLRQL 105

Query: 83  GVKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVKGLKV----EIPEGARTVE---EET 135
             +       PR    EW +  K+ +R ++ FL    ++V    E+ E  R      EE 
Sbjct: 106 NHEPFEYSSAPRADEPEWDQLVKFGLRKIEKFLKSSAIEVQFDNEVTESGRYAPRFIEEI 165

Query: 136 ADDGELL 142
           AD+ +++
Sbjct: 166 ADEIDVI 172


>UniRef50_Q7RQE2 Cluster: Dentin phosphoryn, putative; n=7;
           Plasmodium (Vinckeia)|Rep: Dentin phosphoryn, putative -
           Plasmodium yoelii yoelii
          Length = 1249

 Score = 31.5 bits (68), Expect = 6.9
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 51  IKETFFGDNNNETIKTNLFSLVPLDVETINSLGVKKTVRDVKPRGF 96
           + ++FFGD NN  I      + P  + T+N+L     + ++ P GF
Sbjct: 256 MNKSFFGDTNNNNISGG-GKINPFGMSTMNNLNSSNKLNEIGPGGF 300


>UniRef50_Q03F73 Cluster: DNA polymerase III, alpha subunit; n=1;
           Pediococcus pentosaceus ATCC 25745|Rep: DNA polymerase
           III, alpha subunit - Pediococcus pentosaceus (strain
           ATCC 25745 / 183-1w)
          Length = 1107

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 8/65 (12%)

Query: 76  VETINSLGVKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVKGLKVEIPEGARTVEEET 135
           ++ +N LG+K    D+     LS+  ++A Y  +++  FL++KGL+ +     R + EE 
Sbjct: 772 IQELNRLGIKVKAPDIN----LSQ-LQYAFYQQQIIMGFLSIKGLRRDF---IRNLIEER 823

Query: 136 ADDGE 140
             +GE
Sbjct: 824 QSNGE 828


>UniRef50_A0NXT4 Cluster: Putative uncharacterized protein; n=1;
           Stappia aggregata IAM 12614|Rep: Putative
           uncharacterized protein - Stappia aggregata IAM 12614
          Length = 519

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 14/36 (38%), Positives = 22/36 (61%)

Query: 93  PRGFLSEWAEFAKYLMRLVQDFLNVKGLKVEIPEGA 128
           P+ F  +  E+   L+RLVQ+ LN  G+ V  P+G+
Sbjct: 437 PQDFCGQVDEYDAGLVRLVQEALNYSGIDVGTPDGS 472


>UniRef50_Q8IDM0 Cluster: Putative uncharacterized protein
           MAL13P1.239; n=1; Plasmodium falciparum 3D7|Rep:
           Putative uncharacterized protein MAL13P1.239 -
           Plasmodium falciparum (isolate 3D7)
          Length = 1847

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 8/115 (6%)

Query: 14  QLSRSN--VTEDGYLRYV--KDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLF 69
           +L++ N    ED Y+ ++  K+    K E    ++ K     + +F+    NE I   L 
Sbjct: 318 ELNKKNKKTVEDQYMMFLLYKEYLSSKNEKYGKMEIKNFLSQELSFYNFLKNENINICLL 377

Query: 70  SLVPLDVETINSLGVKKTVRDVKPRGFLSEWAEFAKYLMRLVQDFLNVKGLKVEI 124
           SL+  D+  +N+  +K  + ++      S+ +    +L    +DFLN K +K  +
Sbjct: 378 SLIYRDLSFLNNYEIKYVLMNL----VYSKISNSEFFLYSSKEDFLNNKKIKSHV 428


>UniRef50_Q6LFI3 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1948

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)

Query: 13   LQLSRSNVTEDGYLRYVKDSCFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLV 72
            L +S+ N+ +D Y++ V  SC+     +   K K  K  K T   +NNN  +K N     
Sbjct: 988  LYISKFNIIQDTYIKNVIASCY----KLEYEKKKKKKKKKITNLNNNNNIFLKMNNLYKQ 1043

Query: 73   PLDVETINSL 82
             L  + INS+
Sbjct: 1044 LLSNDIINSI 1053


>UniRef50_Q22ND6 Cluster: Helicase conserved C-terminal domain
           containing protein; n=2; Tetrahymena thermophila
           SB210|Rep: Helicase conserved C-terminal domain
           containing protein - Tetrahymena thermophila SB210
          Length = 1778

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 5/61 (8%)

Query: 79  INSLGVKKTVRDVKPRGFLSEWAEFAKYLMRLV-QDFLNVKGLKVEIPEGARTVEEETAD 137
           IN +G K  ++  +P   +SE  +F KYL +L+ + F N+K   +E   G  ++E+E  +
Sbjct: 859 INEIGQK--MQQGRPCLIISESEKFGKYLSKLISKKFSNIK--IIEYYSGDESIEKEQVN 914

Query: 138 D 138
           D
Sbjct: 915 D 915


>UniRef50_A1CYG2 Cluster: Cellobiose dehydrogenase, putative; n=8;
           Pezizomycotina|Rep: Cellobiose dehydrogenase, putative -
           Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 874

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 5/102 (4%)

Query: 13  LQLSRSNVTEDGYLRYVKDSCFVKGEAISCVK-YKGLKVIKETFFGDN--NNETIKTNLF 69
           LQ   SNV  DG  R+ + SC   G+ I  +K Y           G N   + TI+T+  
Sbjct: 591 LQFWTSNVASDGVTRFFQASCSPGGDGIITMKLYLTHGATSSGVLGINAAGSTTIETDPL 650

Query: 70  SLVPLDVETINSLGVKKTVRDVKPRGF-LSEWAEFAKYLMRL 110
                D E + S  +++ + D+K   + + E+A  A  L ++
Sbjct: 651 LQTAEDKEALTSF-LQELLDDLKKASYTVQEYASAADILAKM 691


>UniRef50_Q9I1M1 Cluster: 2-oxoisovalerate dehydrogenase subunit
           beta; n=67; cellular organisms|Rep: 2-oxoisovalerate
           dehydrogenase subunit beta - Pseudomonas aeruginosa
          Length = 350

 Score = 31.1 bits (67), Expect = 9.1
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 4/93 (4%)

Query: 23  DGYLRYVKDSCFV--KGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVETIN 80
           DGY +   D   +   G A++ + Y  +  + +    +   +    +L SL PLD+ETI 
Sbjct: 215 DGYYKVPLDKAAIVRPGAALTVLTYGTMVYVAQAAADETGLDAEIIDLRSLWPLDLETIV 274

Query: 81  SLGVKKTVRDVKPRGFLSEWAEFAKYLMRLVQD 113
           +  VKKT R V      +    F   LM LVQ+
Sbjct: 275 A-SVKKTGRCVIAHE-ATRTCGFGAELMSLVQE 305


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.319    0.137    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,588,392
Number of Sequences: 1657284
Number of extensions: 5863991
Number of successful extensions: 13754
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 13746
Number of HSP's gapped (non-prelim): 27
length of query: 142
length of database: 575,637,011
effective HSP length: 93
effective length of query: 49
effective length of database: 421,509,599
effective search space: 20653970351
effective search space used: 20653970351
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 67 (31.1 bits)

- SilkBase 1999-2023 -