GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000040-TA|BGIBMGA000040-PA|undefined
         (142 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    27   0.064
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   0.79 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   0.79 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   4.2  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 0.064
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 52  KETFFGDNNNETIKTNLFSLVPLDVETINSL 82
           ++ F  ++N ET+K NLF L+   VET N +
Sbjct: 181 QKNFINESNVETVKFNLF-LLSQAVETFNDI 210


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 64  IKTNLFSLVPLDVETINSLGVKKTVRDV 91
           +  NLFS VPL V  ++ L +   + D+
Sbjct: 183 VSYNLFSFVPLVVNALDHLFLNDILSDI 210


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 64  IKTNLFSLVPLDVETINSLGVKKTVRDV 91
           +  NLFS VPL V  ++ L +   + D+
Sbjct: 139 VSYNLFSFVPLVVNALDHLFLNDILSDI 166


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol
          oxidase subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 4.2
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 44 KYKGLKVIKETFFGDNNNETIKTNLFSLVPL 74
          KYK L V     F  +  ET+     S+ PL
Sbjct: 38 KYKPLGVSLSNRFKQDAEETVPVKKISIPPL 68


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.137    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,736
Number of Sequences: 317
Number of extensions: 1313
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 142
length of database: 114,650
effective HSP length: 51
effective length of query: 91
effective length of database: 98,483
effective search space:  8961953
effective search space used:  8961953
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)