GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000040-TA|BGIBMGA000040-PA|undefined
         (142 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     23   2.9  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     23   2.9  
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         23   3.9  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     23   3.9  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    22   8.9  

>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 34  FVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLD 75
           F   + I  + YK L   K  F+G+     +  N  +  P+D
Sbjct: 170 FFNTDVIRTINYKKLYNPKFGFYGNGKYNVVYANYTATYPMD 211


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 34  FVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLD 75
           F   + I  + YK L   K  F+G+     +  N  +  P+D
Sbjct: 170 FFNTDVIRTINYKKLYNPKFGFYGNGKYNVVYANYTATYPMD 211


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 34  FVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLD 75
           F   + I  + YK L   K  F+G+     +  N  +  P+D
Sbjct: 170 FFNTDVIRTINYKKLYDPKFGFYGNGKYNIVYANYTATYPMD 211


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 34  FVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLD 75
           F   + I  + YK L   K  F+G+     +  N  +  P+D
Sbjct: 170 FFNTDVIRTINYKKLYDPKFGFYGNGKYNIVYANYTATYPMD 211


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 33  CFVKGEAISCVKYKGLKVIKETFFGDNNNETIKTNLFSLVPLDVE 77
           CF  G  + C    G  ++  + F + + E       + VP+DV+
Sbjct: 497 CFCYGHTLECTSASGYSIVSTSNF-NKHKEKWTAISDTGVPVDVK 540


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.137    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,955
Number of Sequences: 2123
Number of extensions: 5365
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 5
length of query: 142
length of database: 516,269
effective HSP length: 58
effective length of query: 84
effective length of database: 393,135
effective search space: 33023340
effective search space used: 33023340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)