GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000039-TA|BGIBMGA000039-PA|IPR000875|Cecropin,
IPR003254|Insect immunity protein and cecropin
         (59 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor...    85   3e-16
UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4; Obtectomera...    43   0.001
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    37   0.091
UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...    35   0.37 
UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep: Cecro...    33   1.1  

>UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor;
          n=5; Ditrysia|Rep: Antibacterial peptide enbocin
          precursor - Bombyx mori (Silk moth)
          Length = 59

 Score = 84.6 bits (200), Expect = 3e-16
 Identities = 40/42 (95%), Positives = 40/42 (95%)

Query: 1  MNFTRIIFFLFVVVFATASAKPWNFFKEIERAVARTRDAVIS 42
          MNFTRIIFFLFVVVFATAS KPWN FKEIERAVARTRDAVIS
Sbjct: 1  MNFTRIIFFLFVVVFATASGKPWNIFKEIERAVARTRDAVIS 42


>UniRef50_Q2WGL2 Cluster: Antibacterial peptide; n=4;
          Obtectomera|Rep: Antibacterial peptide - Bombyx mori
          (Silk moth)
          Length = 66

 Score = 43.2 bits (97), Expect = 0.001
 Identities = 17/42 (40%), Positives = 26/42 (61%)

Query: 1  MNFTRIIFFLFVVVFATASAKPWNFFKEIERAVARTRDAVIS 42
          M FT+I+F   + +   + A  W+FFKE+E    R RD++IS
Sbjct: 1  MYFTKIVFVAIICIMIVSCASAWDFFKELEGVGQRVRDSIIS 42


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17;
          Ditrysia|Rep: Cecropin-A precursor - Hyalophora
          cecropia (Cecropia moth)
          Length = 64

 Score = 36.7 bits (81), Expect = 0.091
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 5/46 (10%)

Query: 1  MNFTRIIFFLFVVVFATA--SAKP---WNFFKEIERAVARTRDAVI 41
          MNF+RI FF+F  + A A  +A P   W  FK+IE+     RD +I
Sbjct: 1  MNFSRIFFFVFACLTALAMVNAAPEPKWKLFKKIEKVGQNIRDGII 46


>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
          Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
          (Silk moth)
          Length = 63

 Score = 34.7 bits (76), Expect = 0.37
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 5/46 (10%)

Query: 1  MNFTRIIFFLFVVVFATA--SAKP---WNFFKEIERAVARTRDAVI 41
          MNF +I+ F+F +V A +  SA P   W  FK+IE+     RD ++
Sbjct: 1  MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIV 46


>UniRef50_P01511 Cluster: Cecropin-D; n=6; Obtectomera|Rep:
          Cecropin-D - Antheraea pernyi (Chinese oak silk moth)
          Length = 36

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 14/20 (70%), Positives = 16/20 (80%)

Query: 23 WNFFKEIERAVARTRDAVIS 42
          WN FKE+ERA  R RDA+IS
Sbjct: 1  WNPFKELERAGQRVRDAIIS 20


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.338    0.141    0.425 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,618,179
Number of Sequences: 1657284
Number of extensions: 612633
Number of successful extensions: 3129
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3124
Number of HSP's gapped (non-prelim): 5
length of query: 59
length of database: 575,637,011
effective HSP length: 39
effective length of query: 20
effective length of database: 511,002,935
effective search space: 10220058700
effective search space used: 10220058700
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.8 bits)
S2: 65 (30.3 bits)