Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000035-TA|BGIBMGA000035-PA|undefined
         (164 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    25   0.24 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.0  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 25.4 bits (53), Expect = 0.24
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 75  PTLQPKPMGTFRTEPKLKDEQTTQAN 100
           PT +P+P  T  +EP    EQ T+++
Sbjct: 397 PTPEPQPTQTTESEPTQASEQPTESS 422


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 118 FQNLQRNRFRRSLESDNLFVIRDLDEIE 145
           F+ + ++ FRR ++S +LFVI  L + E
Sbjct: 214 FEQINQH-FRRQIKSVDLFVIFPLTKAE 240


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)

Query: 118 FQNLQRNRFRRSLESDNLFVIRDLDEIE 145
           F+ + ++ FRR ++S +LFVI  L + E
Sbjct: 170 FEQINQH-FRRQIKSVDLFVIFPLTKAE 196


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.318    0.132    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,131
Number of Sequences: 317
Number of extensions: 1384
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 164
length of database: 114,650
effective HSP length: 52
effective length of query: 112
effective length of database: 98,166
effective search space: 10994592
effective search space used: 10994592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
S2: 40 (20.2 bits)