Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000035-TA|BGIBMGA000035-PA|undefined
         (164 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   6.2  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   6.2  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   6.2  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   6.2  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   6.2  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   6.2  
AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    21   6.2  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 35 AYDDQKTRRKYKKTPK 50
          +Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 35 AYDDQKTRRKYKKTPK 50
          +Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 35 AYDDQKTRRKYKKTPK 50
          +Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 35 AYDDQKTRRKYKKTPK 50
          +Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 35 AYDDQKTRRKYKKTPK 50
          +Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
          determiner protein.
          Length = 174

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 35 AYDDQKTRRKYKKTPK 50
          +Y ++ + RKY+KT K
Sbjct: 49 SYKNENSYRKYRKTSK 64


>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/25 (32%), Positives = 16/25 (64%)

Query: 127 RRSLESDNLFVIRDLDEIEFLGKDN 151
           R +++SDN+F   +L ++  L + N
Sbjct: 45  RNAIQSDNVFANCELQKLRLLLQGN 69


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.318    0.132    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,160
Number of Sequences: 429
Number of extensions: 1743
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 164
length of database: 140,377
effective HSP length: 53
effective length of query: 111
effective length of database: 117,640
effective search space: 13058040
effective search space used: 13058040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 41 (20.6 bits)