Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000034-TA|BGIBMGA000034-PA|IPR005225|Small GTP-binding
protein domain, IPR006689|ARF/SAR superfamily,
IPR006688|ADP-ribosylation factor, IPR006687|GTP-binding protein SAR1,
IPR001806|Ras GTPase
(197 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 6e-44
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 3e-38
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 154 4e-38
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 141 4e-34
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 138 2e-33
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 130 7e-31
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 108 3e-24
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 103 1e-22
SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44) 98 5e-21
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 95 3e-20
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 4e-19
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 86 2e-17
SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13) 70 1e-12
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 66 2e-11
SB_214| Best HMM Match : Arf (HMM E-Value=0) 65 4e-11
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 52 3e-07
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_1913| Best HMM Match : Arf (HMM E-Value=0.015) 41 8e-04
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 37 0.010
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 36 0.017
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 36 0.022
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 35 0.039
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 33 0.16
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 33 0.21
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 32 0.27
SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05) 32 0.36
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 31 0.48
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.63
SB_8302| Best HMM Match : G-alpha (HMM E-Value=0) 31 0.63
SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_38597| Best HMM Match : Arf (HMM E-Value=0.15) 30 1.1
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06) 29 3.4
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 29 3.4
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 28 4.4
SB_28402| Best HMM Match : ResIII (HMM E-Value=0.061) 28 5.9
SB_54863| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 27 7.8
SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40) 27 7.8
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 27 7.8
SB_16631| Best HMM Match : BCNT (HMM E-Value=2.3) 27 7.8
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 173 bits (422), Expect = 6e-44
Identities = 92/172 (53%), Positives = 111/172 (64%), Gaps = 18/172 (10%)
Query: 18 GLLDILKKLRSNPEKEXXXXXXXXDNAGKTTLLKQLASEDVNHVIPTAGFNIKSVLS-NG 76
GLL +L+KL+S ++E DN+GKTT+LK LASEDV H+ PT GFNIKSV S G
Sbjct: 2 GLLSLLRKLKSEKDREMRILLLGLDNSGKTTILKSLASEDVLHITPTQGFNIKSVQSKGG 61
Query: 77 FKLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVP 136
F+LNVWDIGGQRKIRPYW+NYFENTDIL ++KL VP
Sbjct: 62 FRLNVWDIGGQRKIRPYWKNYFENTDIL-----------------ELDELLEEEKLIGVP 104
Query: 137 LLVYANKQDLATALPASEIAQHLGLHLIRDRTWQIQACVATDGTGVKEGMEW 188
LLV+ANKQDL A +EI+ +LGL+ IR R WQIQ C A G GV+ E+
Sbjct: 105 LLVFANKQDLMNAATPAEISSNLGLNTIRSRGWQIQGCSALTGEGVQHSDEY 156
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 155 bits (375), Expect = 3e-38
Identities = 74/153 (48%), Positives = 95/153 (62%)
Query: 42 DNAGKTTLLKQLASEDVNHVIPTAGFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYFENT 101
D AGKTT+L +L ++ IPT GFN++SV VWD+GGQ KIRP WR+YF+NT
Sbjct: 26 DAAGKTTILYKLKLGEIVTTIPTIGFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNT 85
Query: 102 DILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATALPASEIAQHLGL 161
LIYVVD +D R +D+L+ +LV ANKQDL AL SEI + LGL
Sbjct: 86 QGLIYVVDSNDRERVNESKEELNKMLQEDELKDAVVLVMANKQDLPNALSVSEITEKLGL 145
Query: 162 HLIRDRTWQIQACVATDGTGVKEGMEWVCKNIN 194
IRDR W IQA AT GTG+ EG++W+ ++
Sbjct: 146 QSIRDRQWYIQAACATQGTGLYEGLDWLSNELS 178
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 154 bits (374), Expect = 4e-38
Identities = 74/167 (44%), Positives = 100/167 (59%)
Query: 31 EKEXXXXXXXXDNAGKTTLLKQLASEDVNHVIPTAGFNIKSVLSNGFKLNVWDIGGQRKI 90
+KE D AGKTT+L +L ++ IPT GFN+++V VWD+GGQ KI
Sbjct: 15 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKI 74
Query: 91 RPYWRNYFENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATAL 150
RP WR+YF+NT LI+VVD +D R +D+LR LLV+ANKQDL A+
Sbjct: 75 RPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRDAVLLVFANKQDLPNAM 134
Query: 151 PASEIAQHLGLHLIRDRTWQIQACVATDGTGVKEGMEWVCKNINVKK 197
A+EI LGLH +R+R W IQA AT G G+ EG++W+ + K+
Sbjct: 135 NAAEITDKLGLHSLRNRQWYIQATCATSGDGLYEGLDWLSNTLKSKQ 181
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 141 bits (341), Expect = 4e-34
Identities = 68/156 (43%), Positives = 93/156 (59%)
Query: 42 DNAGKTTLLKQLASEDVNHVIPTAGFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYFENT 101
D AGKTT+L L ++ + IPT GFN++ V K VWDIGGQ KIR WR YF+ T
Sbjct: 99 DAAGKTTILYHLKLDEPVNTIPTIGFNVEVVEYKNIKFTVWDIGGQDKIRLLWRLYFQET 158
Query: 102 DILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATALPASEIAQHLGL 161
LI+VVD +D R +++L+ LLV ANKQDL ++ +E+++ L L
Sbjct: 159 QGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDLPDSMSTTELSEKLSL 218
Query: 162 HLIRDRTWQIQACVATDGTGVKEGMEWVCKNINVKK 197
H +R R W IQA A G GV EG+EW+ + I ++K
Sbjct: 219 HTLRSRNWYIQATCALKGQGVYEGLEWLAQQIQLRK 254
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 138 bits (335), Expect = 2e-33
Identities = 67/156 (42%), Positives = 93/156 (59%)
Query: 42 DNAGKTTLLKQLASEDVNHVIPTAGFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYFENT 101
DNAGKTT+L +L E+V +PT GFN+++V VWDIGGQ KIR WR Y++
Sbjct: 5 DNAGKTTILYRLKLEEVVSTVPTLGFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQGC 64
Query: 102 DILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATALPASEIAQHLGL 161
+I+VVD +D R +++L+ V LLV ANKQD+A A+ ASEI + L L
Sbjct: 65 QGIIFVVDSADRERAEEARNELHKLLAEEELQQVILLVIANKQDMANAMTASEIREKLKL 124
Query: 162 HLIRDRTWQIQACVATDGTGVKEGMEWVCKNINVKK 197
+ IR R W +Q+ A G G+ EG++W+ I K
Sbjct: 125 NEIRGRPWFVQSACAVKGEGLFEGLDWMATQIRNNK 160
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 130 bits (314), Expect = 7e-31
Identities = 64/153 (41%), Positives = 93/153 (60%), Gaps = 1/153 (0%)
Query: 42 DNAGKTTLLKQLASEDVNHVIPTAGFNIKSVL-SNGFKLNVWDIGGQRKIRPYWRNYFEN 100
D AGKTT+L +L ++ IPT GFN++++ + L +WD+GGQ KIRP WR+YF+
Sbjct: 28 DAAGKTTILYKLKLKETVSTIPTIGFNVETLQPTKNVTLTIWDVGGQDKIRPLWRHYFQG 87
Query: 101 TDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATALPASEIAQHLG 160
T+ L++VVD SD R D+ R VP++V ANKQDL AL A E+A+HLG
Sbjct: 88 TEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRDVPVVVVANKQDLPNALKAGEMAKHLG 147
Query: 161 LHLIRDRTWQIQACVATDGTGVKEGMEWVCKNI 193
L + W +Q AT+G G+ E M+ + + +
Sbjct: 148 LLQHKRNPWHVQEACATNGDGLYEAMDHMVRMV 180
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 108 bits (259), Expect = 3e-24
Identities = 54/147 (36%), Positives = 82/147 (55%), Gaps = 1/147 (0%)
Query: 46 KTTLLKQLASEDVNHVIPTAGFNIKSVLS-NGFKLNVWDIGGQRKIRPYWRNYFENTDIL 104
KTT+L +L ++ + +PT FN++++ +VWDIGGQ KIR WR+YF+ + +
Sbjct: 122 KTTILYKLKLKETVNTVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWRHYFQGAEGI 181
Query: 105 IYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATALPASEIAQHLGLHLI 164
I+VVD +D R +L VP++V ANKQDL A+ ++A+ L L+
Sbjct: 182 IFVVDSADKERIFEVREELTRVLQHSELNGVPVVVVANKQDLLGAIGPDKMAEELSLYKH 241
Query: 165 RDRTWQIQACVATDGTGVKEGMEWVCK 191
W+IQ AT G G+ E ME + K
Sbjct: 242 TKNPWRIQGTCATAGDGLYEAMEALAK 268
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 103 bits (246), Expect = 1e-22
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 42 DNAGKTTLLKQLASEDVNHVIPTAGFNIKSVLS-NGFKLNVWDIGGQRKIRPYWRNYFEN 100
D +GKT++L + + + +PT FN++++ G + VWDIGG+ + RP W+ Y
Sbjct: 30 DKSGKTSILYRNKFREYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQNRPLWKAYARQ 89
Query: 101 TDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATALPASEIAQHLG 160
TD +IYVVD + + +L P+L++ANKQD A+P EI L
Sbjct: 90 TDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNGAPILIFANKQDCPNAIPPREITHMLS 149
Query: 161 LHLIRDR-TWQIQACVATDGTGVKEGM 186
LH + R W +Q C A G G+ +G+
Sbjct: 150 LHDLNARHLWFVQPCSALLGEGLLDGL 176
>SB_32972| Best HMM Match : Arf (HMM E-Value=2.66247e-44)
Length = 257
Score = 97.9 bits (233), Expect = 5e-21
Identities = 46/105 (43%), Positives = 61/105 (58%)
Query: 84 IGGQRKIRPYWRNYFENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANK 143
I GQ IRPYWR Y+ NTD +IYVVD D R +D+L+ L+V+ANK
Sbjct: 153 IPGQTSIRPYWRCYYANTDAVIYVVDSVDKDRIGISKQELLAMLEEDELKKAILIVFANK 212
Query: 144 QDLATALPASEIAQHLGLHLIRDRTWQIQACVATDGTGVKEGMEW 188
QD+ A+ +SE++ LGL ++ RTW I A G G+ E MEW
Sbjct: 213 QDMEGAMSSSEVSNALGLSALKSRTWAIFKTSAVKGEGLDEAMEW 257
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 95.1 bits (226), Expect = 3e-20
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 3/153 (1%)
Query: 16 FHGLLDILKKLRSNPEKEXXXXXXXXDNAGKTTLLKQLASEDVNH-VIPTAGFNIKSVLS 74
F +LD K L E E +GKTT + +AS + +IPT GFN++ V
Sbjct: 5 FRSILDWFKSLFWKEEMELTLVGLQY--SGKTTFVNVIASGQFSEDMIPTVGFNMRKVSK 62
Query: 75 NGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRA 134
+ VWDIGGQ + R W Y + ++Y+VD +DH + +L
Sbjct: 63 GNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAG 122
Query: 135 VPLLVYANKQDLATALPASEIAQHLGLHLIRDR 167
+P+LV NK+DL +L E+ + L L ++DR
Sbjct: 123 IPILVLGNKKDLPNSLDEKELVERLNLTSVQDR 155
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 91.5 bits (217), Expect = 4e-19
Identities = 46/124 (37%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Query: 42 DNAGKTTLLKQLASEDVNH---VIPTAGFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYF 98
D +GK+ L L+ D + T GFN+ + ++G LN+W+IGG K R YW N+
Sbjct: 175 DGSGKSVFLSALSQGDSSKRPSTTKTEGFNVVCLTTDGLNLNIWEIGGDEKYRAYWPNFI 234
Query: 99 ENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATALPASEIAQH 158
+T +L+YVVD SD R + L VP+L+ A+KQDL A SEI
Sbjct: 235 ADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQDLPGARQLSEIVSV 294
Query: 159 LGLH 162
LG++
Sbjct: 295 LGIN 298
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 61 VIPTAGFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCSDHHRXXXXX 120
V P GFN+++V VWD+GGQ KIRP WR+YF+NT LI+VVD +D R
Sbjct: 494 VSPVQGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAK 553
Query: 121 XXXXXXXXDDKLRAVPLLVYANKQ 144
+D+LR LLV+ANKQ
Sbjct: 554 EELSRMLAEDELRDAVLLVFANKQ 577
>SB_2235| Best HMM Match : Arf (HMM E-Value=3.1e-13)
Length = 334
Score = 69.7 bits (163), Expect = 1e-12
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 81 VWDIGGQRKIRPYWRNYFENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVY 140
VWDIGGQ +R ++ + ++ LIYVVD +D R + + VP++V
Sbjct: 22 VWDIGGQPNLRKHY--FTDDKSGLIYVVDSTDIQRLNEAQLLGILQ--EKVMVDVPVVVV 77
Query: 141 ANKQDLATALPASEIAQHLGLHLIRDRTWQIQACVATDGTGVKEGMEWV 189
ANKQDL L A +IA+HLGL ++ +Q A++G G+ E +W+
Sbjct: 78 ANKQDLPNVLKAGDIAEHLGLLKLKRNPLHVQEAFASNGDGLCEAHKWL 126
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 69.3 bits (162), Expect = 2e-12
Identities = 27/39 (69%), Positives = 33/39 (84%)
Query: 77 FKLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCSDHHR 115
FKLN+WD+GGQR +R YWRNYFE+TD LI+VVD +D R
Sbjct: 2 FKLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRR 40
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 65.7 bits (153), Expect = 2e-11
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 83 DIGGQRKIRPYWRNYFENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYAN 142
D+GGQ KIRP WR+YF + LI+VVDC+D R D +++ V +L++AN
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 143 KQDL 146
KQDL
Sbjct: 203 KQDL 206
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 64.9 bits (151), Expect = 4e-11
Identities = 27/100 (27%), Positives = 51/100 (51%)
Query: 62 IPTAGFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCSDHHRXXXXXX 121
+PT + + G + +D+GG R+ R W++YF + +++++DC+D R
Sbjct: 5 VPTLHPTSEELSMGGMRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKK 64
Query: 122 XXXXXXXDDKLRAVPLLVYANKQDLATALPASEIAQHLGL 161
D++L + P+L+ NK D+ A+ I Q+ GL
Sbjct: 65 ELDSLLADEQLSSCPVLILGNKIDIPGAVGEDYIRQNFGL 104
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 52.0 bits (119), Expect = 3e-07
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 65 AGFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYFENT 101
AGFN+++V K +WD+GG +K+RP WR+Y+ NT
Sbjct: 221 AGFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYYLNT 257
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 47.2 bits (107), Expect = 9e-06
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 19/112 (16%)
Query: 42 DNAGKTTLLKQLASE--------DVNHVIPTAGFNIKSVLSNGFKLNVWDIGGQRKIRPY 93
DNAGKTTLL+Q+ + + T G NI + + KL WD+GGQ+++R
Sbjct: 30 DNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGKITISHVKLMFWDLGGQQELRTL 89
Query: 94 WRNYFENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQD 145
W + +++ + L VPLLV ANKQD
Sbjct: 90 W----DKVEVMSVKI-------LMTRFLPVEEALTHKALEGVPLLVLANKQD 130
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 43 NAGKTTLLKQLASEDVN-HVIPTAG--FNIKSVLSNG--FKLNVWDIGGQRKIRPYWRNY 97
N GKT L++Q + PT G F IK+V +G KL +WD GQ + R ++Y
Sbjct: 17 NVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQERFRSITQSY 76
Query: 98 FENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLAT 148
+ N D +I D + + + + V + + NK DL+T
Sbjct: 77 YHNADGVIVTYDIT-NKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSDLST 126
>SB_16166| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 131 KLRAVPLLVYANKQDLATALPASEIAQHLGLHLIRDRTWQIQACV 175
+L+ LL+ ANKQD+ ++ +EI++ L L I+D W IQ V
Sbjct: 47 ELKQAALLILANKQDIKGSMSVAEISEQLNLACIKDHGWHIQRIV 91
>SB_1913| Best HMM Match : Arf (HMM E-Value=0.015)
Length = 777
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 129 DDKLRAVPLLVYANKQDLATALPASEIAQHLGLHLIRDRTWQI 171
D K + +P+L +ANK DL AL + + LGL I+D+ W I
Sbjct: 46 DIKSKRIPVLFFANKMDLRDALSSIKCTNLLGLEAIKDKPWHI 88
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 37.1 bits (82), Expect = 0.010
Identities = 31/111 (27%), Positives = 42/111 (37%), Gaps = 7/111 (6%)
Query: 53 LASEDVNHVIPTA-GFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCS 111
+ +D +H I G I +V KL +WD GQ + R R+Y+ + V D S
Sbjct: 119 VVKQDSSHTIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDIS 178
Query: 112 DHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDL-----ATALPASEIAQ 157
V +LV NK+DL T L AS AQ
Sbjct: 179 SRETFNSLTNWLTDARTLASPNIVIILV-GNKKDLDADREVTFLEASRFAQ 228
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Query: 45 GKTTLLKQLAS-----EDVNHVIPTAGFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYFE 99
GKT+L+++ + V G + + + KL WD GQ K R ++Y+
Sbjct: 23 GKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQEKFRGITQSYYR 82
Query: 100 NTDILIYVVDCSD 112
N D +I V D ++
Sbjct: 83 NADAVILVFDITN 95
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 45 GKTTLLKQLASEDV-NHVIPTAG--FNIKSVLSNG--FKLNVWDIGGQRKIRPYWRNYFE 99
GK++LL + A + N I T G F I+++ +G KL +WD GQ + R Y+
Sbjct: 20 GKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQERFRTLTTAYYR 79
Query: 100 NTDILIYVVDCSD 112
+ ++ + D ++
Sbjct: 80 SAHGIVLIYDVNE 92
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 35.9 bits (79), Expect = 0.022
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Query: 30 PEKEXXXXXXXXDNAGKTTLLKQLASEDVNHVI-PTAG--FNIKSVLSNG--FKLNVWDI 84
PE+ GK++ + +L + + T G F +K+++ +G + L +WD
Sbjct: 439 PERMFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDT 498
Query: 85 GGQRKIRPYWRNYFENTD--ILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYAN 142
GQ + R ++YF D +L+Y V C + + VP+++ N
Sbjct: 499 AGQERFRSIAKSYFRKADGVLLLYDVTC---ETSFLDVRDWVEAIEESCSKPVPIMLCGN 555
Query: 143 KQDLATALPA 152
K D+ + A
Sbjct: 556 KIDIRQSAAA 565
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 35.1 bits (77), Expect = 0.039
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 45 GKTTLLKQLAS-EDVNHVIPTAG--FNIKSVLSNG---FKLNVWDIGGQRKIRPYWRNYF 98
GK++LL+Q + + PT G F+++ + G KL +WD GQ + R +Y+
Sbjct: 25 GKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQERFRSITYSYY 84
Query: 99 ENTDILIYVVDCSD 112
NT + + D ++
Sbjct: 85 RNTVGCLIIYDITN 98
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 33.5 bits (73), Expect = 0.12
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 63 PTAG--FNIKSVLSNGF--KLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCSDHHRXXX 118
PT G F K+VL + F +L +WD GQ + R +Y +++ + V D + ++
Sbjct: 194 PTIGIDFMTKTVLLDDFEVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDIT-NYTSFE 252
Query: 119 XXXXXXXXXXDDKLRAVPLLVYANKQD 145
D++ +++ NK D
Sbjct: 253 SVGDWVKMVRDERGEKAVIIIVGNKMD 279
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 67 FNIKSVLSNG--FKLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCSD 112
F I+++ +G KL +WD GQ + R +Y+ +I V D +D
Sbjct: 66 FKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD 113
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 33.1 bits (72), Expect = 0.16
Identities = 34/162 (20%), Positives = 55/162 (33%), Gaps = 6/162 (3%)
Query: 30 PEKEXXXXXXXXDNAGKTTLLKQLASEDVN-HVIPTAG--FNIKSVLSNG--FKLNVWDI 84
PE+ GK++ L + + T G F IK++ NG + +WD
Sbjct: 893 PERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDT 952
Query: 85 GGQRKIRPYWRNYFENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQ 144
GQ + R + YF D ++ D + + V +V NK
Sbjct: 953 AGQERFRSITKQYFRKADGILIFYDVT-AESSFTNLKKWMVSVEEGAEEGVAKMVLGNKT 1011
Query: 145 DLATALPASEIAQHLGLHLIRDRTWQIQACVATDGTGVKEGM 186
DLA + + G +L A G ++E M
Sbjct: 1012 DLAEDEESRVVKTIDGKNLANQYDALYMETSAKTGNNIQEAM 1053
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 32.7 bits (71), Expect = 0.21
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Query: 45 GKTTLLKQLASEDVNHV-IPTAG--FNIKSVLSNG--FKLNVWDIGGQRKIRPYWRNYFE 99
GKT+ L + A + + T G F +K+V N KL +WD GQ + R Y+
Sbjct: 33 GKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYR 92
Query: 100 NTDILIYVVDCSD 112
I + D ++
Sbjct: 93 GAMGFILMYDITN 105
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 32.3 bits (70), Expect = 0.27
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 45 GKTTLLKQ-LASEDVNHVIPTAGFNIKSVL---SNG-FKLNVWDIGGQRKIRPYWRNYFE 99
GKTT +K+ L E I T G + ++ S G K NVWD GQ K Y+
Sbjct: 44 GKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGLRDGYYI 103
Query: 100 NTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDL 146
I + D + R + +P+++ NK D+
Sbjct: 104 QGQCAIIMFDVTS--RVTYKNVPNWHRDLERVCENIPIVLCGNKVDI 148
>SB_19345| Best HMM Match : Arf (HMM E-Value=3.3e-05)
Length = 222
Score = 31.9 bits (69), Expect = 0.36
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 99 ENTDILIYVVDCS-DHHRXXXXXXXXXXXXXDDKLRA-VPLLVYANKQDLATALPAS--E 154
+N D IYVVD S + R + K + PLLV + T LP S
Sbjct: 125 QNVDAFIYVVDSSAESQRVNIGDKELQAMMNNSKSQPRQPLLVLSAVATQDT-LPLSCVR 183
Query: 155 IAQHLGLHLIRDRTWQIQACVATDGTGVKEGMEWVCKNI 193
+ L ++ + +R WQ+ + G+ EGM W+ K +
Sbjct: 184 VTDMLQMNKL-NRPWQVNMMCVENLDGLLEGMTWLLKQV 221
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 67 FNIKSVLSNG--FKLNVWDIGGQRKIRPYWRNYFENTDILIYVVD 109
F I+++ +G KL +WD GQ + R Y+ T +I V D
Sbjct: 14 FKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYD 58
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 31.5 bits (68), Expect = 0.48
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 45 GKTTLLKQLASEDVNHVI-PTAGFNIK----SVLSNGFKLNVWDIGGQRKIRPYWRNYFE 99
GK++LL + + + I T G + K +V N KL +WD GQ + R +Y+
Sbjct: 20 GKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQERFRTLTPSYYR 79
Query: 100 NTDILIYVVD 109
+I V D
Sbjct: 80 GAQGVILVYD 89
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 31.1 bits (67), Expect = 0.63
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 77 FKLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCS 111
FKL +D+GGQR R W + FE+ +IY V S
Sbjct: 245 FKL--FDVGGQRSERKKWIHCFEDVTAIIYCVALS 277
>SB_8302| Best HMM Match : G-alpha (HMM E-Value=0)
Length = 315
Score = 31.1 bits (67), Expect = 0.63
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Query: 77 FKLNVWDIGGQRKIRPYWRNYFENTDILIYVVDCS 111
FKL +D+GGQR R W + FE+ +IY V S
Sbjct: 197 FKL--FDVGGQRSERKKWIHCFEDVTAIIYCVALS 229
>SB_30236| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 353
Score = 30.7 bits (66), Expect = 0.83
Identities = 12/31 (38%), Positives = 20/31 (64%)
Query: 83 DIGGQRKIRPYWRNYFENTDILIYVVDCSDH 113
D+GGQR R W + FEN ++++V S++
Sbjct: 199 DVGGQRSERRKWIHCFENVTSIMFLVALSEY 229
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 43 NAGKTTLLKQLASEDV-NHVIPTAGFNI--KSVLSNG--FKLNVWDIGGQRKIRPYW-RN 96
N GKT L +L + T G + KS+ NG KL +WD GQ + R +
Sbjct: 56 NVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQERFRKSMVCH 115
Query: 97 YFENTDILIYVVD 109
Y+ N + ++++ D
Sbjct: 116 YYRNVNAVVFMYD 128
>SB_38597| Best HMM Match : Arf (HMM E-Value=0.15)
Length = 188
Score = 30.3 bits (65), Expect = 1.1
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 77 FKLNVWDIGGQRKIRPYWRNYF 98
F + V+D+GG KIR W++Y+
Sbjct: 4 FNVTVYDLGGGAKIRGIWKDYY 25
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 29.5 bits (63), Expect = 1.9
Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 11/125 (8%)
Query: 45 GKTTLLKQLASEDVNHVI--PTAG--FNIKSVL---SNGFKLNVWDIGGQRKIRPYWRNY 97
GK + +K+ + ++ H + PT G F +K++ + +L +W I GQ + R Y
Sbjct: 30 GKQSFVKRYVN-NIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQERFSSMTRVY 88
Query: 98 FENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKL---RAVPLLVYANKQDLATALPASE 154
++ D + + D KL + VP ++ NK DL E
Sbjct: 89 YKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVGNKSDLPDRPVDKE 148
Query: 155 IAQHL 159
I L
Sbjct: 149 IIDKL 153
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 2/104 (1%)
Query: 88 RKIRPYWRNYFENTDILIYV--VDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQD 145
R I+ R+Y E DI Y+ VD D+ D L V + Y K D
Sbjct: 427 RPIQANIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDYLEKVDIRDHLVKVDIKDYLEKVD 486
Query: 146 LATALPASEIAQHLGLHLIRDRTWQIQACVATDGTGVKEGMEWV 189
L +I HL IRD ++ + ++E +E V
Sbjct: 487 FRDYLDKVDIRDHLEKVDIRDHLEKVDIRDYQEKVDIREHLEKV 530
>SB_977| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 81 VWDIGGQRKIRPYWRNYFENTDILIYVVDCS 111
++D+GGQR R W + FE +I+ V S
Sbjct: 198 MFDVGGQRSERKKWIHCFEGVTAIIFCVALS 228
>SB_38168| Best HMM Match : Lectin_C (HMM E-Value=7.9e-06)
Length = 583
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 166 DRTWQIQACVATDGTGVKEGMEWVCKNINV 195
DR +A +AT TGV+ M+W+ N +V
Sbjct: 318 DRCISEKALIATKNTGVQPAMDWISMNPDV 347
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/76 (21%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 45 GKTTLLKQLASEDVN------HVIPTAGFNIKSVLSNGFKLNVWDIGGQRKIRPYWRNYF 98
GKT++ +L++++ H I + + + K+++WD G + RN++
Sbjct: 20 GKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKIHLWDTLGMEEYESLTRNHY 79
Query: 99 ENTDI--LIYVVDCSD 112
N+ + ++Y +D D
Sbjct: 80 SNSKVVLVVYSLDLPD 95
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 78 KLNVWDIGGQRKIRPYWRNYFENTDILIYVVD 109
KL +WD GQ + R ++Y+ + + +I D
Sbjct: 96 KLQIWDTAGQERFRTITQSYYRSCNGVIIAYD 127
>SB_28402| Best HMM Match : ResIII (HMM E-Value=0.061)
Length = 337
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 47 TTLLKQLASEDVNHVIPTAGFNIKSVLSNGFKLNVWDIGGQR 88
T+L K+L +D+N P I ++LSN + +GG R
Sbjct: 206 TSLQKKLKEQDINSFFPVQSSVIPAILSNLASGTLAGLGGYR 247
>SB_54863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 66 GFNIKSVLSNGFKLNVWDIGG-QRKIRPYW-RNYF-ENTDILIYVVDCSDHHR 115
G + + ++ +NV IGG + Y RNY EN D++++ + +D+HR
Sbjct: 892 GTTVTPITNSQININVIAIGGTDSEYFSYCIRNYIHENPDLILWELAANDYHR 944
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 27.5 bits (58), Expect = 7.8
Identities = 29/125 (23%), Positives = 43/125 (34%), Gaps = 5/125 (4%)
Query: 43 NAGKTTLLKQLASEDVNH-VIPTA-GFNIKSVLSNG--FKLNVWDIGGQRKIRPYWRNYF 98
+ GKT+L+ + N PT F IK V N ++L + D G + +
Sbjct: 38 SVGKTSLILRFLGYAFNDDYSPTIEDFFIKHVFFNNETYELQIIDTSGTYEFPAMRKVDI 97
Query: 99 ENTDILIYVVDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATALPASEIAQH 158
D + V DH + P +V NK DL A + H
Sbjct: 98 AKGDAFVLVYS-QDHPESFTKLNRYRSEILEGGKNRHPCIVVCNKNDLPLATHLGVLTDH 156
Query: 159 LGLHL 163
GL +
Sbjct: 157 RGLRI 161
>SB_57573| Best HMM Match : 7tm_2 (HMM E-Value=3.7e-40)
Length = 956
Score = 27.5 bits (58), Expect = 7.8
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Query: 133 RAVPLLVYANKQDLATALPASEIAQHLGLHLIRDRTWQ-----IQACVATDGTGVKE-GM 186
R L Y L +L S+ A LG+ IR +TW +++ + T G+G+++
Sbjct: 412 RLTSTLRYKIHMQLCISLAVSQAAFLLGIAAIRYKTWNPASMLLESGIHTLGSGIQDLNW 471
Query: 187 EWVCKNINVKK 197
E KN+ KK
Sbjct: 472 EPEYKNLGKKK 482
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 77 FKLNVWDIGGQRKIRPYWRNYFENTD--ILIYVVD 109
+ L +WD GQ + + ++ +D +L+Y VD
Sbjct: 260 YTLQIWDTAGQERFKSLRTPFYRGSDLCLLVYAVD 294
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 72 VLSNGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVVD 109
V +K N+WD GQ + + Y+ + I V D
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYD 41
>SB_16631| Best HMM Match : BCNT (HMM E-Value=2.3)
Length = 197
Score = 27.5 bits (58), Expect = 7.8
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
Query: 95 RNYFENTDILIYV--VDCSDHHRXXXXXXXXXXXXXDDKLRAVPLLVYANKQDLATALPA 152
R+Y E DI Y+ VD D+ D L V + Y K D+ L
Sbjct: 102 RDYLEKVDIRDYLEKVDIRDYLEKVDIRDYLEEVDIRDYLEKVDIRDYLEKVDIRDYLEE 161
Query: 153 SEIAQHLGLHLIRDRTWQIQACVATDGTGVKEGME 187
+I HL IRD ++ + +++ +E
Sbjct: 162 VDIRDHLEKVDIRDNLEKVDTRDYLEEVDIRDYLE 196
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,125,579
Number of Sequences: 59808
Number of extensions: 205832
Number of successful extensions: 420
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 367
Number of HSP's gapped (non-prelim): 61
length of query: 197
length of database: 16,821,457
effective HSP length: 79
effective length of query: 118
effective length of database: 12,096,625
effective search space: 1427401750
effective search space used: 1427401750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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