Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000033-TA|BGIBMGA000033-PA|IPR013069|BTB/POZ,
IPR000210|BTB
(287 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomy... 35 0.012
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 30 0.33
SPBC2G5.04c |||COPII-coated vesicle component Erv41 |Schizosacch... 28 1.8
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 3.1
SPAC23G3.07c |snf30||SWI/SNF complex subunit Snf30|Schizosacchar... 27 4.1
SPBC19C2.02 |pmt1||DNA methyltransferase homolog|Schizosaccharom... 26 5.4
SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces pomb... 26 5.4
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 25 9.5
>SPAC13D6.04c |btb3||BTB/POZ domain protein Btb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 523
Score = 35.1 bits (77), Expect = 0.012
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 137 HRAILMARCDPMKAMFQGHFRESNSR--VISLPGVKIYAFHILLCYMYTDKIPSVESARC 194
HRAI M RC+ M G F ESN V+SLP I+L ++YTDK +
Sbjct: 320 HRAI-MCRCEYFLDMLAGPFLESNQELPVLSLP-FSSSVVEIVLKFLYTDK-TDIAPELA 376
Query: 195 LELLELANRFCMNR 208
L+++ +A+ +++
Sbjct: 377 LDVVYVADMLSLDK 390
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 30.3 bits (65), Expect = 0.33
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Query: 66 IDNEIRQASELLGIPELTRTSQLILTQQMLYDEAFLLQFHVSITRRFRDMYVERNTFADV 125
+ + + + LL +P L +++Q L L I + + + YV D
Sbjct: 707 LKENLSKLANLLELPHLAEVLPFSVSRQPL------LSLTNDILQLYNNFYVLCEETMDT 760
Query: 126 TFALDDGIHLAHRAILMARCDPMKAMFQGHFRESNS----RVISLPGVKIYAFHILLCYM 181
L DG AH L R + + FQ ESNS ++L + + I+L ++
Sbjct: 761 VIKLKDGELKAHGLFLSLRSEYFSSYFQFVSMESNSFDIPITVNLSHLTVEHMSIVLRHV 820
Query: 182 YTD 184
Y+D
Sbjct: 821 YSD 823
>SPBC2G5.04c |||COPII-coated vesicle component Erv41
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 333
Score = 27.9 bits (59), Expect = 1.8
Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 59 SRYIQFNIDNEIRQASELLGIPELTRTSQLIL-TQQMLYDEAFLLQFHVSITRRFRDMY 116
S + NID I L I + RT L+L T+ + +EAF+ S T D Y
Sbjct: 69 SELMDLNIDITIAMPCSNLRIDVVDRTKDLVLATEALTLEEAFIKDMPTSSTIYKNDRY 127
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 27.1 bits (57), Expect = 3.1
Identities = 14/65 (21%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 68 NEIRQASELLGIP-ELTRTSQLILTQQMLYDEAFLLQFHVSITRRFRDMYVERNTFADVT 126
+++ QA+ +L P ++ +S + +++ ++ +Q+ S R+ E+ FA++T
Sbjct: 88 DKVEQATHILVTPSKIGESSSVEPITKLVLPDSQTIQYSFSFQRKRFIYEPEKGCFANIT 147
Query: 127 FALDD 131
F +D+
Sbjct: 148 FPMDE 152
>SPAC23G3.07c |snf30||SWI/SNF complex subunit
Snf30|Schizosaccharomyces pombe|chr 1|||Manual
Length = 274
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 56 PPESRYIQFNIDNEIRQASELLGIPEL-TRTSQLILTQQMLYDEAFLLQ 103
PP + Y +F DN + ++S G P + S+ +QQ L+Q
Sbjct: 216 PPNNNYSKFRTDNYLARSSNRSGTPNIQNEQSRFFDSQQAQVQARALMQ 264
>SPBC19C2.02 |pmt1||DNA methyltransferase
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 330
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 6/59 (10%)
Query: 38 LRNDEHDNGHDNGRDNADPPESRYIQFNIDNEIRQASELLGIPELTRTSQLILTQQMLY 96
L+ +H+N H+ N + RY R+ + L+G PE S+ +T++ +Y
Sbjct: 253 LQMSDHENTHEQFERNRMALQLRYFT------AREVARLMGFPESLEWSKSNVTEKCMY 305
>SPBC3B9.16c |nup120||nucleoporin Nup120|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1136
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 152 FQGHFRESNSRVISLPGVKIYAFHILLCYMYTDKIPSVESARCLELLELA 201
F+ +R N+ +IS+ + Y ++L Y K+ + + +C+E +EL+
Sbjct: 227 FKADYRSPNT-IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 275
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 25.4 bits (53), Expect = 9.5
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 135 LAHRAILMARCDPMKAMFQGHFRESNSRVISLPGVKIYAFHILLCYMYTDKIP--SVESA 192
L H L D K++++ R+S V V++ +F + ++ + I S+E+
Sbjct: 158 LGHSKDLSQMRDEAKSLYEA--RKSYFTVALQYVVRVTSFRSSIDFIVIESICKFSIETF 215
Query: 193 RCLELLELANRFCMNRLVNLVEYK 216
R + L +NR ++L+ L+ Y+
Sbjct: 216 RLTDRLHESNRHINDQLIRLLSYE 239
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.324 0.139 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,308,467
Number of Sequences: 5004
Number of extensions: 54047
Number of successful extensions: 184
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 181
Number of HSP's gapped (non-prelim): 9
length of query: 287
length of database: 2,362,478
effective HSP length: 72
effective length of query: 215
effective length of database: 2,002,190
effective search space: 430470850
effective search space used: 430470850
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 53 (25.4 bits)
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