Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000032-TA|BGIBMGA000032-
PA|IPR005135|Endonuclease/exonuclease/phosphatase, IPR000300|Inositol
polyphosphate related phosphatase
         (656 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.    344   1e-96
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   7.9  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score =  344 bits (846), Expect = 1e-96
 Identities = 160/274 (58%), Positives = 195/274 (71%), Gaps = 5/274 (1%)

Query: 1   MLPIWTSEFLQAVSRMDPKFIALHLQEVGGKAYEKSMQYVKDFVQRLCDCPELRLFDKIR 60
           ML IWT EFL  + R+DPKFIALH QEVGGK YE S + V+DFV+ L    ELRLFDKIR
Sbjct: 25  MLKIWTEEFLSTILRLDPKFIALHCQEVGGKNYEHSTRQVEDFVRLLMSSEELRLFDKIR 84

Query: 61  IYLDEDFSSPEKFTALGNMYFAHSSLVDLKIWDFDLKAYVDVVGKEIHSGNIENASTKEK 120
           ++LDED+SS E FTALGN YF H SL ++ +WDF    ++ V GKE+HSGNIE  +TKEK
Sbjct: 85  VFLDEDYSSAEHFTALGNFYFVHESLKNVLLWDFQECTFISVNGKEVHSGNIEAVTTKEK 144

Query: 121 AKFPQHFFPECKWSRKGFLRTRWTIRGTAVEFVNIHLFHDASNLVAMEPFPSVYCXXXXX 180
           AKFPQ FFPECKWSRKGFLRTRW+I GT  + +NIHLFHDASN +AME FPSVY      
Sbjct: 145 AKFPQEFFPECKWSRKGFLRTRWSISGTVFDLINIHLFHDASNFIAMETFPSVYSKTRRR 204

Query: 181 XXXXXXXXXHADG-SAAPYFIFGDFNFRTDTAGVVKKVTEDLSAQRVQGGAEGGRLQYRR 239
                    H D  S  PYF+FGDFNFRTDTAGV+KK+TED   +R+       +LQ+  
Sbjct: 205 ALEHTLDRFHNDKYSNVPYFLFGDFNFRTDTAGVIKKLTEDTQERRLSNKGSISKLQFHN 264

Query: 240 RADQRLVLTVGKKEFAHVDHQKIFRE---PWVRD 270
           + D  L+LT+GKKEF+H +HQ +F +    W+R+
Sbjct: 265 K-DDDLILTLGKKEFSHYEHQNVFVKNSGQWLRE 297



 Score = 59.3 bits (137), Expect = 1e-10
 Identities = 26/46 (56%), Positives = 34/46 (73%)

Query: 308 SSRRLQRYDRELEALRPHLFEFPVKFPPTYPFEEDVLLPTHYMKTR 353
           S + L+ YDRELE     LFEFP+KF P+YPFEED+   ++YM+TR
Sbjct: 291 SGQWLREYDRELEDFDGRLFEFPIKFVPSYPFEEDINEGSNYMQTR 336



 Score = 33.5 bits (73), Expect = 0.006
 Identities = 11/16 (68%), Positives = 14/16 (87%)

Query: 464 VIGDTACMGDHKPIYL 479
           +IG T CMGDHKP++L
Sbjct: 367 IIGPTTCMGDHKPVFL 382


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 556 VDDALLSVRRCLDPYTPESADSPNAEGSDVE 586
           VDD     +  L  YT +  D P  E +D++
Sbjct: 408 VDDVFQEHKNTLPQYTVQQLDFPGIEIADIK 438


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.136    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,228
Number of Sequences: 429
Number of extensions: 6912
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 6
Number of HSP's gapped (non-prelim): 4
length of query: 656
length of database: 140,377
effective HSP length: 62
effective length of query: 594
effective length of database: 113,779
effective search space: 67584726
effective search space used: 67584726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)