GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000032-TA|BGIBMGA000032-
PA|IPR005135|Endonuclease/exonuclease/phosphatase, IPR000300|Inositol
polyphosphate related phosphatase
         (656 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29612-5|AAA68800.2|  409|Caenorhabditis elegans Inositol polyph...   146   3e-35
AF411588-1|AAL72637.1|  400|Caenorhabditis elegans inositol poly...   146   3e-35
U58757-2|AAC47915.2|  402|Caenorhabditis elegans Hypothetical pr...    39   0.013
U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical p...    29   7.8  
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p...    29   7.8  

>U29612-5|AAA68800.2|  409|Caenorhabditis elegans Inositol
           polyphosphate 5-phosphataseprotein 5 protein.
          Length = 409

 Score =  146 bits (355), Expect = 3e-35
 Identities = 109/355 (30%), Positives = 158/355 (44%), Gaps = 22/355 (6%)

Query: 5   WTSEFLQAVSRMDPKFIALHLQEVGGKAYEKSMQYVKDFVQRLCDCPELRLFDKIRIYLD 64
           W       V  +DP F  +HLQE GGK + +  Q V   + RL     L  FD +R Y+D
Sbjct: 25  WIKTVADQVESVDPSFFVIHLQETGGKKFTECSQQVPIIINRLSTA--LPKFDLLRAYVD 82

Query: 65  EDFSSPEKFTALGNMYFAHSSL-VDLKIWDFDLKAYVDVVG-KEIHSGNIENASTKEKAK 122
            D+ + E +TALG + F   SL  ++  ++F  K Y  +   KE+ +  +EN     K K
Sbjct: 83  IDYEAIE-YTALGALCFIKRSLWSNVSQFNFHTKKYEQLTSPKEVVTHGLENYPYVVKHK 141

Query: 123 FPQHFFPECKWSRKGFLRTRWTIRGTAVEFVNIHLFHDASNLVAMEPFPSVYC--XXXXX 180
           FP+ F+P  KW RKG+++TRW I     +FVN HLFHD SNL  +   P +Y        
Sbjct: 142 FPKDFWPSIKWGRKGYMQTRWKIENKVFDFVNAHLFHDESNLALIHENPQLYSQNRKRAL 201

Query: 181 XXXXXXXXXHADGSAAPYFIFGDFNFRTDTAGVVKKVTEDLSAQRVQGGAEGGRLQ--YR 238
                      +G     F+FGD NFR D+   + ++TE  +   V    + G L    +
Sbjct: 202 DFVLAELSSKENGCTPLLFVFGDLNFRLDSRSFLNRLTERTAQHPVADQEQMGSLADGLQ 261

Query: 239 RRADQRLVLTVGKKEFAHVDHQKIFREPWVRDLPTPPSHYRLVSYQGQSGRLVVEGFLAR 298
             A    V+T   +          FR    R+  +  S    V       R+  + F   
Sbjct: 262 ASAANLQVITHPSENLRRTVSAIEFR----RESDSDDSQNSCVL------RIEKKKFDYF 311

Query: 299 RKRKPSYTASSRRLQRYDRELEALRPHLFEFPVKFPPTYPFEEDVLLPTHYMKTR 353
             +K       R  +  D+E E  +  +FE  + FPPTYP+ ED       MKTR
Sbjct: 312 NHKK--LLDDWRSYRDDDKETENFQ-SMFEMHINFPPTYPWSEDPENSETLMKTR 363


>AF411588-1|AAL72637.1|  400|Caenorhabditis elegans inositol
           polyphosphate 5-phosphatasetype I protein.
          Length = 400

 Score =  146 bits (355), Expect = 3e-35
 Identities = 109/355 (30%), Positives = 158/355 (44%), Gaps = 22/355 (6%)

Query: 5   WTSEFLQAVSRMDPKFIALHLQEVGGKAYEKSMQYVKDFVQRLCDCPELRLFDKIRIYLD 64
           W       V  +DP F  +HLQE GGK + +  Q V   + RL     L  FD +R Y+D
Sbjct: 25  WIKTVADQVESVDPSFFVIHLQETGGKKFTECSQQVPIIINRLSTA--LPKFDLLRAYVD 82

Query: 65  EDFSSPEKFTALGNMYFAHSSL-VDLKIWDFDLKAYVDVVG-KEIHSGNIENASTKEKAK 122
            D+ + E +TALG + F   SL  ++  ++F  K Y  +   KE+ +  +EN     K K
Sbjct: 83  IDYEAIE-YTALGALCFIKRSLWSNVSQFNFHTKKYEQLTSPKEVVTHGLENYPYVVKHK 141

Query: 123 FPQHFFPECKWSRKGFLRTRWTIRGTAVEFVNIHLFHDASNLVAMEPFPSVYC--XXXXX 180
           FP+ F+P  KW RKG+++TRW I     +FVN HLFHD SNL  +   P +Y        
Sbjct: 142 FPKDFWPSIKWGRKGYMQTRWKIENKVFDFVNAHLFHDESNLALIHENPQLYSQNRKRAL 201

Query: 181 XXXXXXXXXHADGSAAPYFIFGDFNFRTDTAGVVKKVTEDLSAQRVQGGAEGGRLQ--YR 238
                      +G     F+FGD NFR D+   + ++TE  +   V    + G L    +
Sbjct: 202 DFVLAELSSKENGCTPLLFVFGDLNFRLDSRSFLNRLTERTAQHPVADQEQMGSLADGLQ 261

Query: 239 RRADQRLVLTVGKKEFAHVDHQKIFREPWVRDLPTPPSHYRLVSYQGQSGRLVVEGFLAR 298
             A    V+T   +          FR    R+  +  S    V       R+  + F   
Sbjct: 262 ASAANLQVITHPSENLRRTVSAIEFR----RESDSDDSQNSCVL------RIEKKKFDYF 311

Query: 299 RKRKPSYTASSRRLQRYDRELEALRPHLFEFPVKFPPTYPFEEDVLLPTHYMKTR 353
             +K       R  +  D+E E  +  +FE  + FPPTYP+ ED       MKTR
Sbjct: 312 NHKK--LLDDWRSYRDDDKETENFQ-SMFEMHINFPPTYPWSEDPENSETLMKTR 363


>U58757-2|AAC47915.2|  402|Caenorhabditis elegans Hypothetical
           protein C01B10.3 protein.
          Length = 402

 Score = 38.7 bits (86), Expect = 0.013
 Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 26/172 (15%)

Query: 1   MLPIWTSEFLQAVSRMDPKFIALHLQEVGGKAYEKSMQYVKDFVQRLCDCPEL-RLFDKI 59
           ++  W SE  + +     +F  +H+Q  G  + E      +     + D PE+ R FD  
Sbjct: 23  LIRAWCSEVAKEIYEQKCEFAVVHVQ--GLHSAENPDYAARVICGCITDNPEIYRAFDSS 80

Query: 60  RIYLDEDFSSPEKFTALGNMY-FAHSSLVDLKIWD-FDLKAYVDVVGKEIHS-------G 110
             + D       K T LGN+Y F + S  D++ +D F    Y++V     HS       G
Sbjct: 81  MAFFDT------KLTGLGNLYLFKNHS--DIQYYDRFSSTGYINVRSGHQHSIGSNECDG 132

Query: 111 NIENASTKEKAKFPQHFFPE-----CKWSRKGFLRTRWTIRGTAVEFVNIHL 157
            I+N +  +   F + F+ +         R GFL  R+ I G  + FVN++L
Sbjct: 133 FIQN-TFGQNYTFRRDFYNDDGTRDLANQRTGFLLARFRIHGKELTFVNLNL 183


>U97005-13|AAB52290.1|  868|Caenorhabditis elegans Hypothetical
           protein F19F10.11b protein.
          Length = 868

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 550 DLCVSDVDDALLSVRRCLDPYTPESADSPNAEGSDVEGRSTEPNRDRSVSPTQLKHRLDR 609
           D  VS V  A+ S+R CL   T   A      G DV    T+  +D +  PT +K+ +  
Sbjct: 516 DSSVSQVIPAIRSIRSCLVKVTVGKAF-----GEDVRKCFTDTFQDFTAGPTSMKYHIAT 570

Query: 610 LLTGREA 616
           +L  R A
Sbjct: 571 ILDPRFA 577


>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
           protein F19F10.11a protein.
          Length = 1121

 Score = 29.5 bits (63), Expect = 7.8
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 5/67 (7%)

Query: 550 DLCVSDVDDALLSVRRCLDPYTPESADSPNAEGSDVEGRSTEPNRDRSVSPTQLKHRLDR 609
           D  VS V  A+ S+R CL   T   A      G DV    T+  +D +  PT +K+ +  
Sbjct: 516 DSSVSQVIPAIRSIRSCLVKVTVGKAF-----GEDVRKCFTDTFQDFTAGPTSMKYHIAT 570

Query: 610 LLTGREA 616
           +L  R A
Sbjct: 571 ILDPRFA 577


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.321    0.136    0.416 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,026,469
Number of Sequences: 27539
Number of extensions: 592537
Number of successful extensions: 1214
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 1199
Number of HSP's gapped (non-prelim): 12
length of query: 656
length of database: 12,573,161
effective HSP length: 86
effective length of query: 570
effective length of database: 10,204,807
effective search space: 5816739990
effective search space used: 5816739990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 63 (29.5 bits)