Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000031-TA|BGIBMGA000031-PA|IPR000873|AMP-dependent
synthetase and ligase, IPR006163|Phosphopantetheine-binding,
IPR002226|Catalase, IPR009081|Acyl carrier protein-like
(783 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0) 146 8e-35
SB_30311| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 8e-07
SB_42438| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 7e-06
SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0) 45 2e-04
SB_18329| Best HMM Match : AMP-binding (HMM E-Value=2.7e-18) 45 2e-04
SB_54338| Best HMM Match : Ligase_CoA (HMM E-Value=0) 42 0.001
SB_8167| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.003
SB_37281| Best HMM Match : AMP-binding (HMM E-Value=3.78351e-44) 41 0.004
SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.031
SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.041
SB_48202| Best HMM Match : GARS_B (HMM E-Value=0.49) 36 0.12
SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.22
SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0) 35 0.22
SB_48516| Best HMM Match : AMP-binding (HMM E-Value=0) 34 0.50
SB_58684| Best HMM Match : AMP-binding (HMM E-Value=0.36) 33 0.88
SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09) 33 1.2
SB_52407| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.2
SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0) 32 1.5
SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37) 32 2.0
SB_44891| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.7
SB_16391| Best HMM Match : AMP-binding (HMM E-Value=1.5e-10) 31 2.7
SB_13373| Best HMM Match : zf-CCHC (HMM E-Value=0.01) 31 2.7
SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45) 31 4.7
SB_43771| Best HMM Match : AMP-binding (HMM E-Value=0.041) 31 4.7
SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18) 31 4.7
SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10) 30 6.2
SB_54379| Best HMM Match : AMP-binding (HMM E-Value=0.0023) 30 8.2
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 30 8.2
SB_13968| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.2
>SB_18399| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 1381
Score = 146 bits (353), Expect = 8e-35
Identities = 151/547 (27%), Positives = 236/547 (43%), Gaps = 52/547 (9%)
Query: 21 MALLATWKAGAAYVPMEPSFPQGRITHILKDAEPSLVIYDDSADPSMFKESGVPFASFEE 80
+ +L+ KAG AYV ++P R+ +IL+D +I + S F S + S +
Sbjct: 96 LTMLSVLKAGGAYVCIDPQHQISRLPYILQDTNAVALITTKQVE-SEFGLSDLTKVSILD 154
Query: 81 LAQEA-TSHSADEPMDA-ETLAPLTSDSIAIVLYTSGSTGIPKGVRLSYSAICNRLWWQF 138
+ A + A +P +A T+ P S + ++YTSGSTG PKGV + + + N + +
Sbjct: 155 IQSRALNTQIASKPSNALATVVP--SSHLCYIIYTSGSTGQPKGVEIEHRTVVNFIKGEL 212
Query: 139 RTFPYSDSEEICVWKTALTFVDSVCEIWGPLLHGRALLILSRETTRD----PQKLVNIER 194
FP + IC + +F SV EIW G L+ E + P L +
Sbjct: 213 EIFPVWSQDRICQGFSP-SFDASVEEIWLAFGTGATLVAAPPEVMQSGPDLPDHLEQLRI 271
Query: 195 LVL--VPTLLRSILMYLALGPASRPLRRLKLWVCSGETLSKELASEFFKYFGNEDGYKLA 252
VL VPTLLR++ L RLKL + GE ++L + DG L
Sbjct: 272 TVLSTVPTLLRTV------DVTDTKLNRLKLIILGGEACGEDLVAW-------ADGRMLI 318
Query: 253 NFYGSTEVMGDVTYYVLEGSDQLDLYPTIPIGRPLDNCAIYLLDEELSPTRDSEPGEVWV 312
N YG TE V+ + ++ I IGR N ++LD L + GE+ +
Sbjct: 319 NSYGPTETT------VVATTCEIKRGKKITIGRAFGNYNAHILDSILVDVEGEKEGELCI 372
Query: 313 AGANLAAGY--VGGGGANRFCDNPHATQPEFQRLYRTGDFGTLV-KGAVLYAGRTDAQVK 369
+G LA GY + +F D H R+YRTGD G + Y GR D QVK
Sbjct: 373 SGKCLARGYRNLPEKTKQQFVD--HQLH---GRIYRTGDLVRWTPDGEIEYLGRIDDQVK 427
Query: 370 IRGHRVDLLEVERALAQVPGVDKCVVLCYGLDRGNPEILGFVTTKPGAR-TSAQHIEGKL 428
IRG RV++ +E L + V V+ G ++ +T + AQ K+
Sbjct: 428 IRGFRVEIGSIETHLQRQENVKMAAVVVLSPSPGQQLVVAHLTLVDKTKGFQAQQAVVKM 487
Query: 429 RSALTHYMMPQ-VIEVESIPLLVNGKVDRQGLLKMYENTNNNDDAEVAVDIDCSXXXXXX 487
+ AL YM+P I E +P L +GKVD++ LK + + +A S
Sbjct: 488 KIALPEYMIPNGYIIHEELPTLASGKVDKK-KLKTLDTPPQSFNA--------SEKYTAP 538
Query: 488 XXXXXXXXXTVGAVLGRAARGTLSLRSGFYELGGNSLNSIYTITKLRDRGYYVEISDFLG 547
++ + +S F+ELGG S+ + I+++R + + + D
Sbjct: 539 RDETERIICSIWE--SKLCNPKISTDENFFELGGQSVVAALVISEMRRHQFDISVRDLYT 596
Query: 548 ASTLGEV 554
T+ E+
Sbjct: 597 HPTVAEL 603
>SB_30311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 53.2 bits (122), Expect = 8e-07
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 6/164 (3%)
Query: 306 EPGEVWVAGANLAAGYVGGGGANRF---CDNPHATQPEFQR--LYRTGDFGTLVKGAVLY 360
E G + G+ A G + G + F + P AT+ F + TGD L G
Sbjct: 49 EQGSRVLDGSKSAEGILHVRGPSVFKGYWNRPEATKESFTEDGWFITGDTARLSDGVYRI 108
Query: 361 AGRTDAQVKIRGHRVDLLEVERALAQVPGVDKCVVLCYGLDRGNPEILGFVTTKPGARTS 420
GR +K G+++ LEVER L Q P V C VL + V + +
Sbjct: 109 IGRPWDIIKSGGYKISALEVERELRQHPDVKDCAVLGIPDPEWGERVAAIVALNDNSALT 168
Query: 421 AQHIEGKLRSALTHYMMPQVIE-VESIPLLVNGKVDRQGLLKMY 463
+ + + Y +P + VE +P V GKV+++ L Y
Sbjct: 169 LEDLRAWGSDHMVRYHIPAALHIVEELPRNVMGKVNKKELYSAY 212
>SB_42438| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 50.0 bits (114), Expect = 7e-06
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 21 MALLATWKAGAAYVPMEPSFPQGRITHILKDAEPSLVIYDDSADPSMFKESGVPFASFEE 80
+A ++ KAG AY+P+E S+P+ + I +D+ P +I D + S VP
Sbjct: 187 IAYISALKAGGAYMPLELSYPENLLKSIFEDSSPVAIITTDELKSRL--PSSVPVL---V 241
Query: 81 LAQEATSHSADEPMDAETLAPLTS--DSIAIVLYTSGSTGIPK 121
L++ E + L P+ S D +A V+Y+SG+TG PK
Sbjct: 242 LSKGWDERLQKENKELGYLPPVESSLDDLAYVVYSSGTTGKPK 284
>SB_50949| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 569
Score = 45.2 bits (102), Expect = 2e-04
Identities = 92/402 (22%), Positives = 148/402 (36%), Gaps = 32/402 (7%)
Query: 77 SFEELAQEATSHSADEPMDAETLAPLTSDSIAIVLYTSGSTGIPKGVRLSYSAICNRLWW 136
S++ L Q + AET + D A+V++TSGSTG PK + ++ N
Sbjct: 162 SYDALLQSFQDDDITQLHQAET--EVQFDDPALVIFTSGSTGRPKPILYTHHGFVNGALS 219
Query: 137 QFRTFPYS-DSEEIC----VWKTALTFVDSVCEIWG-PLLHGRALLILSRETTRDPQKLV 190
TF + D+ + C W + F ++ I G L+ L + K++
Sbjct: 220 VVHTFKATHDTIQFCDAPFDWIPGIGFSLALVSILGMTLVAFPPNLSIKGHVIGIMLKII 279
Query: 191 NIERLVLVPTLLRSIL-MYLALGPASRPLRRLKLWVCSGETLSKELASEFFKYFGNEDGY 249
+ ER L +L M G L +LK+ + G+ + L S+ F D
Sbjct: 280 SEERCTHAIMLTYVMLDMVRYEGLPQLDLSQLKVCITGGQLTDQHLMSKVFSAL--PDLT 337
Query: 250 KLANFYGSTEVMGDVTYYVLEGSDQLDLYPTIPIGRPLDNCAIYLLDEELSPTRDSEPGE 309
+ N YGSTE V + Y + + + ++D+E PGE
Sbjct: 338 SIVNSYGSTETFLPSGQVVTRHNIHSLDYGATEVNPGFE---VKVVDDEGHVVPVGTPGE 394
Query: 310 VWVAGANL--AAGYVGGGGANRFCDNPHATQPEFQRLYRTGDFGTLVKGAVLYAGRTDAQ 367
+ V GA + +A V G P P T D G V GR D
Sbjct: 395 LHVRGAGILQSANGVRMEGVVYEEKTPTGWYPSKDLSKITND------GRVRILGRKDCL 448
Query: 368 VKIRGHRVDLLEVERALAQVPGVDKCVVLCYGLDRGNPEILGFVTTKPGARTSAQHIEGK 427
+K + EVE L + + + + R + V KPG + + +
Sbjct: 449 IKSATESIYPPEVESVLGKHEKIASIIAIGIPDQRLGEVVCACVIIKPGFHGDNKAVIQE 508
Query: 428 LRS-------ALTHYMMPQ---VIEVESIPLLVNGKVDRQGL 459
+ ++ M PQ + +E+ P GKVDR+ L
Sbjct: 509 IDEWCAPKFYVSSNGMTPQPKKYVILENFPKTRTGKVDRKAL 550
>SB_18329| Best HMM Match : AMP-binding (HMM E-Value=2.7e-18)
Length = 1076
Score = 45.2 bits (102), Expect = 2e-04
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 281 IPIGRPLDNCAIYLLDEELSPTRDSEPGEVWVAGANLAAGYVGGGGANRFCDNPHATQPE 340
IPIG PL + + + DEE G+ G + Y+GG F +N P
Sbjct: 294 IPIGEPLQDTLVDIRDEE---------GKKISHG--IGQMYIGGHNRICFLNNEMDVSPG 342
Query: 341 FQRLYRTGDFGTLVKGAVLYAGRTDAQVKIRGHRVDLLEVERALAQV 387
R +GD+ + + + GR D Q+K G R +LL +E+ALA+V
Sbjct: 343 TMRA--SGDWALINNDQIWFLGRKDRQIKRLGQRTNLLWIEQALARV 387
Score = 31.1 bits (67), Expect = 3.5
Identities = 40/182 (21%), Positives = 74/182 (40%), Gaps = 16/182 (8%)
Query: 23 LLATWKAGAAYVPMEPSFPQGRITHILKDAEPSLVIYDDSA-----------DPSMFKES 71
L+ + AA+ P+ S+P I L + ++ + S D + +
Sbjct: 78 LIGVLQMPAAFAPIGTSWPSAMICEFLSNVGIDTILVEASLLLQFKETLQKYDGNSSENH 137
Query: 72 GVPFASFEELAQEATSHSADEPMDAETLAPLTSDSIAIVLYTSGSTGIPKGVRLSYSAIC 131
PF + A + + + D + P S +A V+ TSG+TG P V + + I
Sbjct: 138 PKPFRIINDQALSSIGFTLVKLQDIKQELPKLS--LAFVIQTSGTTGKPTTVMVPHQCIV 195
Query: 132 NRLWWQFRTFPYSDSEEICVWKTALTFVDSVCEIWGPLLHGRALLILSRETTRD-PQKLV 190
+ + F + + + V + TF V +++ L G A +L ET R P +L
Sbjct: 196 PNIISLSQIFAVTPEDSVIV-VSPYTFDPFVVQVFLALEAG-ARAVLLHETDRILPSRLC 253
Query: 191 NI 192
++
Sbjct: 254 SV 255
>SB_54338| Best HMM Match : Ligase_CoA (HMM E-Value=0)
Length = 445
Score = 42.3 bits (95), Expect = 0.001
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 341 FQRLYRTGDFGTLVKGAVLYA-GRTDAQVKIRGHRVDLLEVERALAQVPGVDKCVVLCYG 399
++ Y +GD G L L+ GRTD + + GHR+ E+E +A V +C V+
Sbjct: 348 YKGYYVSGDGGMLDNDGYLFVLGRTDDIINVAGHRLSTGEMEEVVAGHDAVAECAVIGQN 407
Query: 400 LDRGNPEILGFVTTKPGARTSAQHIEGKL 428
E LG V K G + ++ +L
Sbjct: 408 SALKGEEPLGLVLLKDGVDIDEEQLKKEL 436
>SB_8167| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 41.1 bits (92), Expect = 0.003
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 90 ADEPMDA-ETLAPLTSDSIAIVLYTSGSTGIPKGVRLSYSAICNRLWWQFRTFPYSDSEE 148
A +P +A T+ P S + ++YTSGSTG PKGV + + + N + + FP +
Sbjct: 17 ASKPSNALATVVP--SSHLCYIIYTSGSTGQPKGVEIEHRTVVNFIKGELEIFPVWSQDR 74
Query: 149 ICVWKTAL 156
I + +L
Sbjct: 75 IWILTRSL 82
>SB_37281| Best HMM Match : AMP-binding (HMM E-Value=3.78351e-44)
Length = 393
Score = 40.7 bits (91), Expect = 0.004
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 340 EFQRLYRTGDFGTLVKGAVLYA-GRTDAQVKIRGHRVDLLEVERALAQVPGV-DKCVVLC 397
+F+ Y TGD + + GRTD + + GH + ++E AL + V + VV C
Sbjct: 232 KFRGYYTTGDGCKRDENGYYWVTGRTDDCMNVSGHLLSTAQIESALVEHDAVSEAAVVSC 291
Query: 398 YGLDRGNPEILGFVTTKPGARTS---AQHIEGKLRSALTHYMMPQVIE-VESIPLLVNGK 453
++G I F T + ++ K+R + + P VI+ ++P +GK
Sbjct: 292 PHKEKGE-GIYCFATLMENVELDEKLIRELKQKVRLKIGPFASPDVIQSAPALPKTRSGK 350
Query: 454 VDRQGLLKMYENTNNNDDAEVAVD 477
+ R+ L ++ +N D D
Sbjct: 351 IMRRVLRQVAKNDRQTGDLSTIYD 374
Score = 37.1 bits (82), Expect = 0.054
Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 15/179 (8%)
Query: 92 EPMDAETLAPLTSDSIAIVLYTSGSTGIPKGVRLSYSAICNRLWWQFR-TFPYSDSEEIC 150
E D + ++ +LYTSGSTG PKGV ++ FR +F Y E
Sbjct: 3 EASDEHDTVWVDAEDPLFMLYTSGSTGKPKGVLHTHGGYMLYTALTFRYSFDYHPGE--V 60
Query: 151 VWKTA-LTFVDSVCEI-WGPLLHGRALLILSRETTRDPQ-----KLVN---IERLVLVPT 200
W TA + ++ I +GP+ +G A+ +L T P +V+ + + PT
Sbjct: 61 YWCTADIGWITGHSYITYGPMANG-AISVLFEGTPFYPDCGRFWDIVDKYKVSKFYTAPT 119
Query: 201 LLRSILMYLALGPASRPLRRLKLWVCSGETLSKELASEFFKYFGNEDGYKLANFYGSTE 259
+RS++ + S L LK+ GE ++ E ++ G+ + + + Y TE
Sbjct: 120 AIRSLMKFGKEIVTSHNLESLKVLGTVGEPINPEAWLWYYHVVGH-NKCAIVDTYWQTE 177
>SB_30263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 37.9 bits (84), Expect = 0.031
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 24/148 (16%)
Query: 73 VPFASFEELAQEATSHSADE-PMDAETLAPLTSDSIAIVLYTSGSTGIPKGV------RL 125
VP + +EA + DE P + P+ S+ +LYTSGSTG PKG+ L
Sbjct: 236 VPMGKLDIPLEEAMAEQPDECPPE-----PMDSEDPLFLLYTSGSTGQPKGIVHTQAGYL 290
Query: 126 SYSAICNRLWWQFRTFPYSDSEEICVWKTALTFVDSVCEIWGPLLHG-RALLILSRETTR 184
Y+ + ++ + ++ W T ++V ++GPL +G +L S T
Sbjct: 291 LYAKLTHKYCFDYKQGDVFGCVADIGWITGHSYV-----VYGPLANGATTVLFESTPTYP 345
Query: 185 DPQKLVN-IERLVL-----VPTLLRSIL 206
DP + +ERL + PT +R +L
Sbjct: 346 DPGRYWEMVERLRINQFYGAPTAIRLLL 373
Score = 37.1 bits (82), Expect = 0.054
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 325 GGANRFCDNPHATQPEFQRLYRTGDFGTLVK-GAVLYAGRTDAQVKIRGHRVDLLEVERA 383
G RF + + P + Y TGD K G GR D V + G R+ EVE A
Sbjct: 584 GHHERFLNTYYRPYPGY---YFTGDGALRDKDGHYRITGRMDDVVNVSGKRLGTAEVEDA 640
Query: 384 LAQVPGVDKCVVLCYGLDRGNPEILGFVTTKPGARTS----AQHIEGKLRSALTHYMMPQ 439
+ V + V+ + I + T K A+ + ++ +R + + +P+
Sbjct: 641 MDNHSAVAETAVVGFPHPIKGEGIYAYATLKDDAQIEPEQFREEVKKLVRQKIGAFAVPE 700
Query: 440 VIE-VESIPLLVNGKVDRQGLLKMYEN 465
+I+ V +P +GK+ R+ L K+ ++
Sbjct: 701 IIQVVPGLPKTRSGKIMRRILRKVAQD 727
>SB_31957| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 538
Score = 37.5 bits (83), Expect = 0.041
Identities = 82/387 (21%), Positives = 145/387 (37%), Gaps = 49/387 (12%)
Query: 100 APLTSDSIAIVLYTSGSTGIPKGVR-LSYSAICNRLWWQ--------FRTFPYSDSEEIC 150
A + D +++YTSGSTG PK V+ +S C+ L W+ R Y D
Sbjct: 162 AEVQIDDPIVIVYTSGSTGSPKLVQHTCFSRTCSVLTWKDISQDIRAEREIKYFDRPMAW 221
Query: 151 VW--KTALTFVDSVCEIWGP--LLHGRALLILSRETTRDPQKLVNIERLVLVPTLLRSIL 206
W T V+ +W P + + ++ E ++ + I L+ L + L
Sbjct: 222 GWGMLTLCCVVNDSTIVWVPTEITLNEEMNEVAFEIMQNEKCTNGIFSAALMHKLTKDKL 281
Query: 207 MYLALGPASRPLRRLKLWVCSGETLSKELASEFFKYFGNEDGYKLANFYGSTEVMGDVTY 266
L + + G+ K + S + G+ + +GSTE M
Sbjct: 282 ------HLKYDLSSFEEFYYGGQVYPKTMISSVLEGLPFARGF---HVFGSTEGMLQAVK 332
Query: 267 YVLEGSDQLDLYPTIPIGRPLDNCAIYLLDEELSPTRDSEPGEVWVAGANLAAGYVGGGG 326
+ +G + D + + + + C + ++ + PGE+ V A + + YVG
Sbjct: 333 IIKDGMND-DDFGELSV---VPGCEVKIVGDGDEVVPRGTPGEICVRSAMVFSEYVG--- 385
Query: 327 ANRFCDNPHATQPEFQRL--YRTGDFGTL-VKGAVLYAGRTDAQVKIRGHRVDLLEVERA 383
NP AT+ +R GD G + G V GR +K ++ L++E+
Sbjct: 386 ------NPEATKQAKTATGWFRLGDIGVMNESGKVKVLGRKKDFIKRATLKISSLQIEKV 439
Query: 384 LAQVPGVDKCVVLCYGLDRGNPEILGFVTTKPGARTSAQHIE-GKLRSALTHYMMPQ--- 439
+ V VV + + EI V K + +L + + P+
Sbjct: 440 ILGHADVSDAVVFGVPDQQLHEEICACVILKAANNDRGLEVRLAELEAWCSEQFPPEADG 499
Query: 440 -------VIEVESIPLLVNGKVDRQGL 459
++ V++ P GKVDRQ +
Sbjct: 500 LSLKPRYMLLVKTFPSGNTGKVDRQAM 526
>SB_48202| Best HMM Match : GARS_B (HMM E-Value=0.49)
Length = 293
Score = 35.9 bits (79), Expect = 0.12
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 69 KESGVPFASFEELAQEATSHSADEPMDAETLAPLTSDSIAIVLYTSGSTGIPKGVRLSYS 128
+ +G+ SF ++ +H P + + P D +A+V YTSG+TG PKG +++S
Sbjct: 226 ERNGIKIISFSDVEAMGKAH----PYEKKLPKP---DDLAVVCYTSGTTGNPKGAMITHS 278
>SB_7991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 561
Score = 35.1 bits (77), Expect = 0.22
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 77 SFEELAQEATSHSADEPMDAETLAPLTSDSIAIVLYTSGSTGIPKGVRLSYSAICN 132
S+E+L Q+ S+ + A + D A+V++TSGSTGIPK ++ + N
Sbjct: 166 SYEDLVQQGDDTSSALK---QAQAEVQMDDHALVIFTSGSTGIPKPIQFTNHGFVN 218
>SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 549
Score = 35.1 bits (77), Expect = 0.22
Identities = 84/383 (21%), Positives = 152/383 (39%), Gaps = 34/383 (8%)
Query: 45 ITHILKDAEPSLVIYDDSADPSMFKESGVPFASFEELAQEATSHSADEPM-DAETLAPLT 103
++ + K +P LV + A S E+ + +++L + AET +
Sbjct: 120 LSDVSKKTDPILVSLGEMA--SCIGETDLKCHVYDDLIVRGQQKELGNKLTQAETEVQM- 176
Query: 104 SDSIAIVLYTSGSTGIPKGVR-LSYSAICNRLWWQFRTFPYSDSEEICVWKTALTF---V 159
D A++++TSGSTG+PK V+ S++ C ++ + P+ E + + + +
Sbjct: 177 -DDPAVIIFTSGSTGLPKLVQHTSHTLACAQVLSKDTAQPFRAEREKRYFDRPMAWGWGM 235
Query: 160 DSVCEIWG--PLLHGRALLILSRETTRDPQKLVNIERLVLVPTLLRSILMYLALGP--AS 215
+VCE ++ + L+ ET +++ E+ P + +++ L
Sbjct: 236 GTVCETVNDITMVWVPTDMALNDETNEAVFEIMQNEKCTTAPFSV-ALIHKLTKNKLHLK 294
Query: 216 RPLRRLKLWVCSGETLSKELASEFFKYFGNEDGYKLANF-YGSTEVMGDVTYYVLEGSDQ 274
L ++ ++ G+ S L S F + A++ G++E + VT D+
Sbjct: 295 YDLSNIEEFIMGGQMYSHALQSSVFDCL----PFARASYSLGTSEAI--VTAMEKFTRDE 348
Query: 275 LDLYPTIPIGRPLDNCAIYLLDEELSPTRDSEPGEVWVAGANLAAGYVGGGGANRFCDNP 334
L L + ++ +E R PGE+ V A L YVG NP
Sbjct: 349 L-TEENFGKMSVLPGNEVKIVGDEDKIVRRGTPGEICVRTAMLFQEYVG---------NP 398
Query: 335 HATQ--PEFQRLYRTGDFGTL-VKGAVLYAGRTDAQVKIRGHRVDLLEVERALAQVPGVD 391
AT+ YR GD + G + GR +K ++ E+ER + Q V
Sbjct: 399 EATKRAKTATGWYRLGDICVMDESGKIKVLGREKDFIKRATVKIFPAEIERVVLQHADVA 458
Query: 392 KCVVLCYGLDRGNPEILGFVTTK 414
VV+ R + EI V K
Sbjct: 459 DVVVVGVPDQRFHEEICACVILK 481
>SB_48516| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 514
Score = 33.9 bits (74), Expect = 0.50
Identities = 67/291 (23%), Positives = 106/291 (36%), Gaps = 20/291 (6%)
Query: 105 DSIAIVLYTSGSTGIPKGVRLSYSAICNRLWWQFRTFPYSD-----SEEICVWKTALTFV 159
D +V++TSGSTG P ++ N + + R S S+ W T L +
Sbjct: 184 DDSCVVVFTSGSTGNPSPKEYTHHGFVNGILGEARMAGLSRDTILFSDAPFDWITGLANI 243
Query: 160 DSVCEIWGPLLHGRALLILSRETTRDPQKLVNIERLVLVPTLLRSILMYLALGP--ASRP 217
V L+ L+ S T +++ ER T L L L AS
Sbjct: 244 SYVLGTATTLVTFPPNLLFSNHVTTKVLRILEEERCTHA-TFLHYFLKDLTTCKELASFD 302
Query: 218 LRRLKLWVCSGETLSKELASEFFKYFGNEDGYKLANFYGSTEVMGDVTYYV-LEGSDQLD 276
L LK+ + G++ +L + K G + YGSTEV + V L ++D
Sbjct: 303 LSFLKVCLTGGQSTDFDLLHKVLKVL---PGLTIFIAYGSTEVFVCCSQSVDLASICRVD 359
Query: 277 LYPTIPIGRPLDNCAIYLLDEELSPTRDSEPGEVWVAGANLAAGYVGGGGANRFCDNPHA 336
+ + + + ++D E GE+ V GA + V H
Sbjct: 360 EVGKMKVSPGFE---VKVVDSEGRLVPVDTAGELCVRGAAM----VHSANPFNLPATSHR 412
Query: 337 TQPEFQRLYRTGDFGTLV-KGAVLYAGRTDAQVKIRGHRVDLLEVERALAQ 386
+ + T D+ + +G V GR D +K V EVE L +
Sbjct: 413 SPITATGWFHTSDWAAITSEGLVRILGRMDDVIKFATDSVQPKEVEEILCE 463
>SB_58684| Best HMM Match : AMP-binding (HMM E-Value=0.36)
Length = 237
Score = 33.1 bits (72), Expect = 0.88
Identities = 12/21 (57%), Positives = 19/21 (90%)
Query: 107 IAIVLYTSGSTGIPKGVRLSY 127
+A +LY+SG+TG+PKGV L++
Sbjct: 143 VAYILYSSGTTGLPKGVLLTH 163
>SB_54914| Best HMM Match : Patched (HMM E-Value=1.3e-09)
Length = 645
Score = 32.7 bits (71), Expect = 1.2
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 517 YELGGNSLNSIYTITKLRDRGYYVEISDFLGASTLGEVLSKMSTDPNGGADSKEATFT-- 574
+ +SL +I K R + SD A TL ++ S+M+ DPNG + A +
Sbjct: 8 FNFDADSLVNITQTIKNAIRDKPLMQSDRPVAMTLPQMFSRMTEDPNGKISASAAQISYK 67
Query: 575 -AVPMRDEHKKEVIDMVESSFYEKAE 599
VP+ + ++E+++ E +F K E
Sbjct: 68 MQVPVAENQERELLEF-EMAFLRKVE 92
>SB_52407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 32.7 bits (71), Expect = 1.2
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 353 LVKGAVLYAGRTDAQVKIRGHRVDLLEVERALAQVPGVDKCVVLCYGLDRGNPE 406
LV+ AGRT+ Q+ + VDLL+ R+ + + K V+L +G PE
Sbjct: 131 LVRKIPFEAGRTNTQLALSKALVDLLQNNRSNVRPNSIKKVVILSHGQSNIEPE 184
>SB_28869| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 561
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 77 SFEELAQEATSHSADEPMDAETLAPLTSDSIAIVLYTSGSTGIPKGVRLSYSAICNRL 134
S+E L + D + AE + D + + ++TSGSTGIPK ++ N +
Sbjct: 158 SYETLLRSGKEKPRDVLIKAEN--EVQFDDLTVFIFTSGSTGIPKPCEYTHHGFVNAI 213
>SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37)
Length = 497
Score = 31.9 bits (69), Expect = 2.0
Identities = 26/106 (24%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 45 ITHILKDAEPSLVIYDDSADPSMFKESGVPFASFEELAQEATSHSADEPM-DAETLAPLT 103
++ + K +P LV + A S E+ + +++L + AET +
Sbjct: 90 LSDVSKKTDPILVSLGEMA--SCIGETDLKCHVYDDLIVRGQQKELGNKLTQAETEVQM- 146
Query: 104 SDSIAIVLYTSGSTGIPKGVR-LSYSAICNRLWWQFRTFPYSDSEE 148
D A++++TSGSTG+PK V+ S++ C ++ + P+ E
Sbjct: 147 -DDPAVIIFTSGSTGLPKLVQHTSHTLACAQVLSKDTAQPFRAERE 191
>SB_44891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 743
Score = 31.5 bits (68), Expect = 2.7
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 115 GSTGIPKGVRLSYSAICNRLWWQFRTFPYSDSEEICVWKTALTFVDSVCEIWGPLLHGRA 174
G G P+ V NR + Q R+ PY ++ +WK + V +W PL+ G A
Sbjct: 521 GGRGAPR-VAYQKDLAKNRRFPQTRSLPYKETNIFLIWKICMILVIFESSLW-PLMFGLA 578
>SB_16391| Best HMM Match : AMP-binding (HMM E-Value=1.5e-10)
Length = 418
Score = 31.5 bits (68), Expect = 2.7
Identities = 57/221 (25%), Positives = 89/221 (40%), Gaps = 27/221 (12%)
Query: 253 NFYGSTE-VMGDVTYYVLEGSDQLDLYPTIPIGRPLDNCAIYLLDEELSPTRDSEPGEVW 311
N YGSTE +T Y + D Y + + ++D+E + GE+
Sbjct: 198 NSYGSTEGCQHAITTYTKDTISICD-YGKMSV---FPGVEAKVVDDEGKMVKRGVAGEMC 253
Query: 312 VAGANLAAGYVGGGGANRFCDNPHATQ--PEFQRLYRTGDFGTLVK-GAVLYAGRTDAQV 368
V A + Y+G NP +T+ Y TGD + K G + GR +
Sbjct: 254 VRSAWVFREYLG---------NPESTRRAKSLTGWYHTGDICQMDKDGRIEVLGRKKDFL 304
Query: 369 KIRGHRVDLLEVERALAQVPGVDKCVVLCYGLDRGNPEILGFVTTKP------GARTSAQ 422
K ++ E+ER + P V V+ R E+ V K GAR A
Sbjct: 305 KRATVKIFPAELERVFQEHPDVLDVAVVGVPDQRYTEELCACVILKSVNDDDTGARLKAL 364
Query: 423 HIEGKLR---SALTHYMMPQV-IEVESIPLLVNGKVDRQGL 459
+ + SA + P+ +++E+ PLL +GK DRQG+
Sbjct: 365 EAWCEQQWPPSADGLSLKPRYFVQMEAFPLLNSGKEDRQGI 405
>SB_13373| Best HMM Match : zf-CCHC (HMM E-Value=0.01)
Length = 206
Score = 31.5 bits (68), Expect = 2.7
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Query: 54 PSLVIYDDSADPSMFKESGVPFASFEELAQEATSHSADEPMDAETLAPLTSDSIAIVLYT 113
P V Y D + + + P F+ A EA H+ D D+ + +P + L T
Sbjct: 83 PRDVHYTDICEEQQYGSAPNPDYGFDLYALEAQVHNIDT--DSPSKSPRKRYFTTLPLST 140
Query: 114 SGSTGIPKGVRLSYSAICNRLWWQFRTFPYSDSE 147
+GS+ P ++ +A CN +++ D+E
Sbjct: 141 TGSSFKPVKFQIDTAATCNTMFYNTLQSVLPDAE 174
>SB_54490| Best HMM Match : AMP-binding (HMM E-Value=4.2039e-45)
Length = 565
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 105 DSIAIVLYTSGSTGIPKGVRLSYSAICNRL 134
D +A+V +TSGSTG PK V + AI N +
Sbjct: 196 DPVAVV-FTSGSTGEPKAVTFTQHAIVNSM 224
>SB_43771| Best HMM Match : AMP-binding (HMM E-Value=0.041)
Length = 339
Score = 30.7 bits (66), Expect = 4.7
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 415 PGARTSAQHIEGKLRSALTHYMMPQVIE-VESIPLLVNGKVDRQGLLKMYENT 466
PG +S + I+ + + H+ +P+ I+ E PL ++GKV ++ M + T
Sbjct: 236 PGESSSPEEIKEFCKGQIAHFKIPKYIKFTEEYPLTISGKVSFVMVIIMTDTT 288
>SB_7062| Best HMM Match : AMP-binding (HMM E-Value=1.4e-18)
Length = 817
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 345 YRTGDFGTLVK-GAVLYAGRTDAQVKIRGHRVDLLEVERALAQVPGVDKCVVL 396
Y TGD + G + + GR+D + G+R+ EVE AL + P V + V+
Sbjct: 432 YLTGDRAVRDEDGYLWFIGRSDDVIISAGYRIGPFEVESALIEHPAVAEAAVV 484
>SB_2435| Best HMM Match : WD40 (HMM E-Value=4.1e-10)
Length = 1272
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 9/50 (18%)
Query: 586 VIDMVES--SFYEKAELEQFLKHEIETRDYADCIDACWPALLQAGLSVVL 633
V+ MVE+ S ++K + F+KH++ T+ YA WP LLQ+ LS VL
Sbjct: 490 VLGMVENTLSHHDKTLMNHFIKHKVTTQLYA------WP-LLQSLLSEVL 532
>SB_54379| Best HMM Match : AMP-binding (HMM E-Value=0.0023)
Length = 277
Score = 29.9 bits (64), Expect = 8.2
Identities = 40/158 (25%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 308 GEVWVAGANLAAGYVGGGGANRFCDNPHATQP--EFQRLYRTGDFGTLVKGAVLY-AGRT 364
GE+ + G + GY+ +NP AT + + TGD G Y GR
Sbjct: 115 GEICIKGPLMMKGYL---------NNPEATANTIDHEGWLHTGDIGYYDDQEHFYIVGRV 165
Query: 365 DAQVKIRGHRVDLLEVERALAQVPGVDKCVVLCYGLDRGNPEILGFVTTKPGA-RTSAQH 423
+K +G +V E+E L P + V+ + FV K G T+ Q
Sbjct: 166 KELIKYKGFQVPPAELEDLLQSHPDIADAAVIGVPDEEAGELPKAFVVLKAGTLGTTPQD 225
Query: 424 IEGKLRSALT--HYMMPQVIEVESIPLLVNGKVDRQGL 459
I + ++ + V V+SIP +GK+ R+ L
Sbjct: 226 IIQFVSENISPQKRLRGGVEIVDSIPKTPSGKILRRQL 263
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 29.9 bits (64), Expect = 8.2
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 23 LLATWKAGAAYVPMEPSFPQGRITHILKDAEPSLVIYDDSADPS 66
++ W GAAY P+ +FP H+L E LV+ + +PS
Sbjct: 1662 MIVNWLPGAAYQPVPSTFPSHE-HHLLPPGEKVLVVVSEK-EPS 1703
>SB_13968| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 595 YEKAEL-EQFLKHEIETRDYADCIDAC 620
YEKA+L +Q L + +E DY + ID C
Sbjct: 677 YEKAKLYQQILHYHMEQNDYTNVIDTC 703
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.407
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,322,501
Number of Sequences: 59808
Number of extensions: 1068214
Number of successful extensions: 2006
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1978
Number of HSP's gapped (non-prelim): 38
length of query: 783
length of database: 16,821,457
effective HSP length: 88
effective length of query: 695
effective length of database: 11,558,353
effective search space: 8033055335
effective search space used: 8033055335
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 64 (29.9 bits)
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