GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000031-TA|BGIBMGA000031-PA|IPR000873|AMP-dependent
synthetase and ligase, IPR006163|Phosphopantetheine-binding,
IPR002226|Catalase, IPR009081|Acyl carrier protein-like
         (783 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    25   1.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   5.5  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    24   5.5  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    24   5.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   9.6  

>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor
          protein.
          Length = 53

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)

Query: 20 IMALLATWKAGAAYVPMEPSFPQ 42
          I ALLAT  A  AYVP+ P+ PQ
Sbjct: 7  IFALLATICAAFAYVPL-PNVPQ 28


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 1/24 (4%)

Query: 312 VAGANLAAGYVGGGGANRFCDNPH 335
           V  A  +AG  GGGGA  + D PH
Sbjct: 590 VGVAAASAGGAGGGGARSYVD-PH 612


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 644 ALNFDVRDEPEIELSGGLAKIMGFLEYVEGSV 675
           ALNF  +D+ +    GG+ K   FL Y  G++
Sbjct: 88  ALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNL 119


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 644 ALNFDVRDEPEIELSGGLAKIMGFLEYVEGSV 675
           ALNF  +D+ +    GG+ K   FL Y  G++
Sbjct: 88  ALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNL 119


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 526 SIYTITKLRDRGYYVEISDFLGASTLGEVLSKMSTDPN 563
           +I+T + +  RG  +++++  G   LG ++      PN
Sbjct: 320 AIHTGSVINTRGERIQLTEKNGIDVLGNIMEASILSPN 357


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.136    0.407 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,504
Number of Sequences: 429
Number of extensions: 9020
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 5
length of query: 783
length of database: 140,377
effective HSP length: 63
effective length of query: 720
effective length of database: 113,350
effective search space: 81612000
effective search space used: 81612000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 47 (23.0 bits)