Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000030-TA|BGIBMGA000030-PA|IPR008908|Sarcoglycan
alphaepsilon, IPR006644|Dystroglycan-type cadherin-like
(507 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 24 2.6
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 24 2.6
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 24 2.6
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 24 2.6
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 24 2.6
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 24 2.6
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 24 2.6
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 24 2.6
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 24 2.6
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 24 2.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 3.4
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 6.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 7.9
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 7.9
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 114
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 114
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 114
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 114
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 114
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 114
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 114
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 114
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 289 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 347
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.2 bits (50), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
Y + S R + S++P++ NN+S S + NN+ +Y+ + L N N
Sbjct: 289 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNY-NNYNKHNYNKLYYNIN 347
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.8 bits (49), Expect = 3.4
Identities = 29/110 (26%), Positives = 37/110 (33%), Gaps = 13/110 (11%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNSI-------ARSYSPKSTP 373
YA K +A + TD S + DN + SL + N I R Y
Sbjct: 551 YADTHAKLVQAAFEQNTTDQSMDIDVCDNQTYTSLQMAMKNPIEFTDLSNERKYEDVCVL 610
Query: 374 NLASNYNRPQPPPYAGALHHRKSTASTRGHTPELLHDPSRTVLEESLKLL 423
+N + P PP R T T P L P R S+ LL
Sbjct: 611 KTDTNQSCPSPP----VTTKRDGTQETEERLPPL--PPKRIRKMPSMPLL 654
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 6.0
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 321 YAAVSQKSARAELGRRGTDSSEQPQLADNNSSKSLGASPNNS 362
Y + S R + S++P++ NN+S S + NN+
Sbjct: 56 YRKYRETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNN 97
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 22.6 bits (46), Expect = 7.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 40 WTYQEFDQQYRFHASLLGKPEL 61
W + E +QY H G+P+L
Sbjct: 173 WQWNEERKQYYLHQFATGQPDL 194
Score = 22.6 bits (46), Expect = 7.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 234 LTLDWCRFELLKTYYKPRSTVQLEYM 259
LT + F L YYK STV +M
Sbjct: 290 LTEAYTEFNLTIKYYKSGSTVPFNFM 315
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.6 bits (46), Expect = 7.9
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 40 WTYQEFDQQYRFHASLLGKPEL 61
WT+ E +Q+ FH +P+L
Sbjct: 180 WTFHEGRKQFYFHQFYKQQPDL 201
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.316 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,926
Number of Sequences: 429
Number of extensions: 6073
Number of successful extensions: 40
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 26
Number of HSP's gapped (non-prelim): 15
length of query: 507
length of database: 140,377
effective HSP length: 61
effective length of query: 446
effective length of database: 114,208
effective search space: 50936768
effective search space used: 50936768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)
- SilkBase 1999-2023 -