Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000030-TA|BGIBMGA000030-PA|IPR008908|Sarcoglycan
alphaepsilon, IPR006644|Dystroglycan-type cadherin-like
(507 letters)
Database: tribolium
317 sequences; 114,650 total letters
Searching....................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 27 0.41
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 26 0.71
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.94
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.94
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.94
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.94
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 25 0.94
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.94
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.94
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 1.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 1.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 1.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 1.6
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 1.6
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 23 3.8
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 23 3.8
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 22 8.7
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 26.6 bits (56), Expect = 0.41
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 358 SPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKS 396
SP AR YS P+ A N+N P PP + L KS
Sbjct: 82 SPQTQPARFYSTPIVPHFAYNHN-PLTPPNSEPLVSPKS 119
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.8 bits (54), Expect = 0.71
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 347 ADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTASTRGHT 404
+ N SS + S +S ++ + + + + N PQ P+ +H +ST + G T
Sbjct: 163 SQNLSSPASSTSSTSSTEKAGTNNNNSKSSQSSNPPQIYPWMKRVHLGQSTVNANGET 220
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 338 TDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
T S + AD+ SS + ASP + P+STP L++ N
Sbjct: 93 THPSASCKYADSTSSTGV-ASPQDLSTNGAPPRSTPPLSTPSN 134
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.94
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 347 ADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTASTRGHT 404
+ N SS + S +S ++ + + + N PQ P+ +H +ST + G T
Sbjct: 163 SQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNANGET 220
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 338 TDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
T S + AD+ SS + ASP + P+STP L++ N
Sbjct: 93 THPSASCKYADSTSSTGV-ASPQDLSTNGAPPRSTPPLSTPSN 134
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 25.4 bits (53), Expect = 0.94
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 347 ADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTASTRGHT 404
+ N SS + S +S ++ + + + N PQ P+ +H +ST + G T
Sbjct: 163 SQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNANGET 220
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 338 TDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
T S + AD+ SS + ASP + P+STP L++ N
Sbjct: 93 THPSASCKYADSTSSTGV-ASPQDLSTNGAPPRSTPPLSTPSN 134
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.94
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 347 ADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTASTRGHT 404
+ N SS + S +S ++ + + + N PQ P+ +H +ST + G T
Sbjct: 163 SQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNANGET 220
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 338 TDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
T S + AD+ SS + ASP + P+STP L++ N
Sbjct: 93 THPSASCKYADSTSSTGV-ASPQDLSTNGAPPRSTPPLSTPSN 134
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 25.4 bits (53), Expect = 0.94
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 347 ADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTASTRGHT 404
+ N SS + S +S ++ + + + N PQ P+ +H +ST + G T
Sbjct: 163 SQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNANGET 220
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 338 TDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
T S + AD+ SS + ASP + P+STP L++ N
Sbjct: 93 THPSASCKYADSTSSTGV-ASPQDLSTNGAPPRSTPPLSTPSN 134
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 25.4 bits (53), Expect = 0.94
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 347 ADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTASTRGHT 404
+ N SS + S +S ++ + + + N PQ P+ +H +ST + G T
Sbjct: 119 SQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNANGET 176
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 338 TDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
T S + AD+ SS + ASP + P+STP L++ N
Sbjct: 49 THPSASCKYADSTSSTGV-ASPQDLSTNGAPPRSTPPLSTPSN 90
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.94
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 347 ADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTASTRGHT 404
+ N SS + S +S ++ + + + N PQ P+ +H +ST + G T
Sbjct: 163 SQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNANGET 220
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 338 TDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
T S + AD+ SS + ASP + P+STP L++ N
Sbjct: 93 THPSASCKYADSTSSTGV-ASPQDLSTNGAPPRSTPPLSTPSN 134
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.94
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 347 ADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTASTRGHT 404
+ N SS + S +S ++ + + + N PQ P+ +H +ST + G T
Sbjct: 163 SQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPPQIYPWMKRVHLGQSTVNANGET 220
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 338 TDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
T S + AD+ SS + ASP + P+STP L++ N
Sbjct: 93 THPSASCKYADSTSSTGV-ASPQDLSTNGAPPRSTPPLSTPSN 134
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 456 GFLSDTTGYLSMKPDTDGIDVPDLGKFGPASDST 489
GF + L +KP G +PD+ + P D T
Sbjct: 335 GFSTHQIQVLEIKPVLGGTALPDISEIIPTGDDT 368
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 456 GFLSDTTGYLSMKPDTDGIDVPDLGKFGPASDST 489
GF + L +KP G +PD+ + P D T
Sbjct: 335 GFSTHQIQVLEIKPVLGGTALPDISEIIPTGDDT 368
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 456 GFLSDTTGYLSMKPDTDGIDVPDLGKFGPASDST 489
GF + L +KP G +PD+ + P D T
Sbjct: 335 GFSTHQIQVLEIKPVLGGTALPDISEIIPTGDDT 368
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 24.6 bits (51), Expect = 1.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 456 GFLSDTTGYLSMKPDTDGIDVPDLGKFGPASDST 489
GF + L +KP G +PD+ + P D T
Sbjct: 335 GFSTHQIQVLEIKPVLGGTALPDISEIIPTGDDT 368
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.6 bits (51), Expect = 1.6
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 338 TDSSEQPQLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYN 380
T S + AD+ SS + ASP + P+STP L++ N
Sbjct: 93 THPSASCKYADSTSSTGV-ASPQDLSTNGAPPRSTPPLSTPSN 134
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.4 bits (48), Expect = 3.8
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 345 QLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTAS 399
QL + ++++ A ++S + S SP+ + + AS + PY A HH A+
Sbjct: 22 QLFQSATTEAPAAYSSSSPSGS-SPQHSSSSASTSPAARMYPYVSAAHHHHQAAA 75
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 23.4 bits (48), Expect = 3.8
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 345 QLADNNSSKSLGASPNNSIARSYSPKSTPNLASNYNRPQPPPYAGALHHRKSTAS 399
QL + ++++ A ++S + S SP+ + + AS + PY A HH A+
Sbjct: 22 QLFQSATTEAPAAYSSSSPSGS-SPQHSSSSASTSPAARMYPYVSAAHHHHQAAA 75
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 22.2 bits (45), Expect = 8.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 214 PSCPRDYKRTTVERLFR 230
P+C R+ + T E+LFR
Sbjct: 883 PTCWRECDKATCEKLFR 899
Database: tribolium
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 114,650
Number of sequences in database: 317
Lambda K H
0.316 0.132 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,966
Number of Sequences: 317
Number of extensions: 4609
Number of successful extensions: 31
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 25
length of query: 507
length of database: 114,650
effective HSP length: 60
effective length of query: 447
effective length of database: 95,630
effective search space: 42746610
effective search space used: 42746610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)
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