Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000029-TA|BGIBMGA000029-PA|IPR002415|High mobility
group-like nuclear protein, IPR004038|Ribosomal protein
L7Ae/L30e/S12e/Gadd45, IPR004037|Ribosomal protein L7AE
(156 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 165 2e-41
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 165 2e-41
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 165 2e-41
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 62 3e-10
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 62 3e-10
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 42 5e-04
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 42 5e-04
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 42 5e-04
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 42 5e-04
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 42 5e-04
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 29 2.1
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 29 2.1
BT010021-1|AAQ22490.1| 1007|Drosophila melanogaster RE09305p pro... 29 3.8
AE014297-4480|AAF56967.2| 1007|Drosophila melanogaster CG31036-P... 29 3.8
U22295-1|AAB03641.1| 622|Drosophila melanogaster unknown protei... 28 5.0
AE014298-480|AAF45836.2| 826|Drosophila melanogaster CG32793-PA... 28 5.0
U22182-2|AAB03639.1| 791|Drosophila melanogaster unknown protein. 28 6.6
AL031366-4|CAA20518.1| 773|Drosophila melanogaster EG:100G7.2,F... 28 6.6
BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p pro... 27 8.7
BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p pro... 27 8.7
AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation ... 27 8.7
AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation ... 27 8.7
AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-P... 27 8.7
AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-P... 27 8.7
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 165 bits (402), Expect = 2e-41
Identities = 81/161 (50%), Positives = 109/161 (67%), Gaps = 6/161 (3%)
Query: 1 MGKVKQEPVEQEDQA-----DVSIKAEPQSHDEKVEHCSIIAKPMAXXXXXXXXXXXXXX 55
MGKVK E E D++ DV+IK E +S+D+K+ + IAKPMA
Sbjct: 1 MGKVKVERSEDADESVVASGDVTIKEE-ESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKK 59
Query: 56 SSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRK 115
+ HK ++RNGLK VQ +LR GE G+ FAGD++P++IMCHLPAVCEEK + Y YTPSR
Sbjct: 60 AMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119
Query: 116 DIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 156
D+GAAMG RG + +LV+++E+YKDLY+EVK E+ L P+
Sbjct: 120 DLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEELSALNIPV 160
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 165 bits (402), Expect = 2e-41
Identities = 81/161 (50%), Positives = 109/161 (67%), Gaps = 6/161 (3%)
Query: 1 MGKVKQEPVEQEDQA-----DVSIKAEPQSHDEKVEHCSIIAKPMAXXXXXXXXXXXXXX 55
MGKVK E E D++ DV+IK E +S+D+K+ + IAKPMA
Sbjct: 1 MGKVKVERSEDADESVVASGDVTIKEE-ESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKK 59
Query: 56 SSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRK 115
+ HK ++RNGLK VQ +LR GE G+ FAGD++P++IMCHLPAVCEEK + Y YTPSR
Sbjct: 60 AMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119
Query: 116 DIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 156
D+GAAMG RG + +LV+++E+YKDLY+EVK E+ L P+
Sbjct: 120 DLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEELSALNIPV 160
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 165 bits (402), Expect = 2e-41
Identities = 81/161 (50%), Positives = 109/161 (67%), Gaps = 6/161 (3%)
Query: 1 MGKVKQEPVEQEDQA-----DVSIKAEPQSHDEKVEHCSIIAKPMAXXXXXXXXXXXXXX 55
MGKVK E E D++ DV+IK E +S+D+K+ + IAKPMA
Sbjct: 1 MGKVKVERSEDADESVVASGDVTIKEE-ESYDDKLIFVNAIAKPMAGKKLAKKCYKLVKK 59
Query: 56 SSNHKNYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRK 115
+ HK ++RNGLK VQ +LR GE G+ FAGD++P++IMCHLPAVCEEK + Y YTPSR
Sbjct: 60 AMKHKTFLRNGLKDVQTRLRKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119
Query: 116 DIGAAMGTMRGCIMVLVKEHEDYKDLYEEVKSEIKLLGHPL 156
D+GAAMG RG + +LV+++E+YKDLY+EVK E+ L P+
Sbjct: 120 DLGAAMGVKRGTVALLVRQNEEYKDLYDEVKEELSALNIPV 160
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 62.1 bits (144), Expect = 3e-10
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 61 NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAA 120
N +R G K L G +V AGD PIEI+ HLP +CE+K+V Y + S++ +G A
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91
Query: 121 MGTMRGCI--MVLVKEHEDYKDLYEEVKSEIKLL 152
G R + V E K ++ EI+ L
Sbjct: 92 CGVSRPIVACSVTTNEGSQLKSQITSIQQEIERL 125
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 62.1 bits (144), Expect = 3e-10
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 61 NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIGAA 120
N +R G K L G +V AGD PIEI+ HLP +CE+K+V Y + S++ +G A
Sbjct: 32 NQLRKGANEATKTLNRGLADIVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSKQALGRA 91
Query: 121 MGTMRGCI--MVLVKEHEDYKDLYEEVKSEIKLL 152
G R + V E K ++ EI+ L
Sbjct: 92 CGVSRPIVACSVTTNEGSQLKSQITSIQQEIERL 125
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 61 NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
+Y+ G V K + + +V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 61 NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
+Y+ G V K + + +V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 61 NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
+Y+ G V K + + +V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 61 NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
+Y+ G V K + + +V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 61 NYIRNGLKIVQKQLRLGEKGMVFFAGDISPIEIMCHLPAVCEEKDVQYCYTPSRKDIG 118
+Y+ G V K + + +V A D+ P+E++ LPA+C + V YC + +G
Sbjct: 139 SYVSAGTNTVTKLIEQKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKARLG 196
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MGKVKQEPVEQEDQADVSIKAEPQSHDEKVEHCSIIAKP 39
+GK K++P E+E +V++K PQ E E + KP
Sbjct: 13079 LGKGKKKPKEEEAPENVTLKNIPQKPQEVEEEVELKQKP 13117
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 1 MGKVKQEPVEQEDQADVSIKAEPQSHDEKVEHCSIIAKP 39
+GK K++P E+E +V++K PQ E E + KP
Sbjct: 14938 LGKGKKKPKEEEAPENVTLKNIPQKPQEVEEEVELKQKP 14976
>BT010021-1|AAQ22490.1| 1007|Drosophila melanogaster RE09305p
protein.
Length = 1007
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 5 KQEPVEQEDQADVSIKAEPQSHDEKVEHCSIIAKPM 40
KQ PV+Q+ + + PQ+H + + H ++P+
Sbjct: 305 KQPPVQQQQEQQQGAQPPPQTHPQSLPHSQSQSQPL 340
>AE014297-4480|AAF56967.2| 1007|Drosophila melanogaster CG31036-PA
protein.
Length = 1007
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 5 KQEPVEQEDQADVSIKAEPQSHDEKVEHCSIIAKPM 40
KQ PV+Q+ + + PQ+H + + H ++P+
Sbjct: 305 KQPPVQQQQEQQQGAQPPPQTHPQSLPHSQSQSQPL 340
>U22295-1|AAB03641.1| 622|Drosophila melanogaster unknown protein
protein.
Length = 622
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 5 KQEPVEQEDQADVSIKAEPQSHDEKVE 31
K+EP ++E Q + K EPQ + KVE
Sbjct: 584 KEEPQKEEPQKEEPQKEEPQKEEPKVE 610
>AE014298-480|AAF45836.2| 826|Drosophila melanogaster CG32793-PA
protein.
Length = 826
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 5 KQEPVEQEDQADVSIKAEPQSHDEKVE 31
K+EP ++E Q + K EPQ + KVE
Sbjct: 788 KEEPQKEEPQKEEPQKEEPQKEEPKVE 814
>U22182-2|AAB03639.1| 791|Drosophila melanogaster unknown protein.
Length = 791
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 5 KQEPVEQEDQADVSIKAEPQSHDEKVE 31
K+EP ++E Q + K EPQ + KVE
Sbjct: 753 KEEPRKEEPQKEEPQKEEPQKEEPKVE 779
>AL031366-4|CAA20518.1| 773|Drosophila melanogaster
EG:100G7.2,FBgn0014097;anon-3Cb protein.
Length = 773
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 5 KQEPVEQEDQADVSIKAEPQSHDEKVE 31
K+EP ++E Q + K EPQ + KVE
Sbjct: 735 KEEPRKEEPQKEEPQKEEPQKEEPKVE 761
>BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p
protein.
Length = 341
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 KVKQEPVEQEDQADVSIKAEPQSHD 27
K EP E+ D AD ++ AEP+S D
Sbjct: 270 KKAAEPAEELDAADEALAAEPKSKD 294
>BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p
protein.
Length = 460
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 KVKQEPVEQEDQADVSIKAEPQSHD 27
K EP E+ D AD ++ AEP+S D
Sbjct: 279 KKAAEPAEELDAADEALAAEPKSKD 303
>AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 431
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 KVKQEPVEQEDQADVSIKAEPQSHD 27
K EP E+ D AD ++ AEP+S D
Sbjct: 250 KKAAEPAEELDAADEALAAEPKSKD 274
>AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 KVKQEPVEQEDQADVSIKAEPQSHD 27
K EP E+ D AD ++ AEP+S D
Sbjct: 179 KKAAEPAEELDAADEALAAEPKSKD 203
>AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-PB,
isoform B protein.
Length = 431
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 KVKQEPVEQEDQADVSIKAEPQSHD 27
K EP E+ D AD ++ AEP+S D
Sbjct: 250 KKAAEPAEELDAADEALAAEPKSKD 274
>AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-PA,
isoform A protein.
Length = 431
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 3 KVKQEPVEQEDQADVSIKAEPQSHD 27
K EP E+ D AD ++ AEP+S D
Sbjct: 250 KKAAEPAEELDAADEALAAEPKSKD 274
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.317 0.134 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,285,927
Number of Sequences: 52641
Number of extensions: 266384
Number of successful extensions: 891
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 845
Number of HSP's gapped (non-prelim): 42
length of query: 156
length of database: 24,830,863
effective HSP length: 79
effective length of query: 77
effective length of database: 20,672,224
effective search space: 1591761248
effective search space used: 1591761248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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