Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000027-TA|BGIBMGA000027-PA|IPR001283|Allergen V5/Tpx-1
related, IPR002413|Ves allergen
(757 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110... 32 1.5
07_01_0203 + 1469575-1470045 32 1.5
07_01_0199 - 1420982-1421452 32 1.5
07_01_0195 - 1387831-1388301 32 1.5
07_01_0191 - 1354678-1355148 32 1.5
07_01_0187 - 1321525-1321995 32 1.5
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 32 1.5
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 31 2.6
12_02_1286 - 27555143-27555191,27555290-27555511,27555911-275561... 31 3.4
03_01_0392 + 3051469-3051876,3052414-3052832,3053992-3054061,305... 31 3.4
>09_01_0076 +
1105331-1105453,1106559-1106705,1107046-1107195,
1107272-1107531,1107897-1108084,1108187-1108311,
1108485-1108521,1108802-1108893,1109023-1109133,
1109242-1109352,1109576-1109669,1109833-1109945,
1110316-1110411,1110510-1110617,1110665-1110814,
1110910-1110990,1111205-1111276,1111553-1111646,
1111759-1111787,1111870-1111967,1112065-1112160,
1112399-1112620,1113002-1113158,1113472-1113627,
1113703-1113930
Length = 1045
Score = 32.3 bits (70), Expect = 1.5
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 22/212 (10%)
Query: 488 KHFGPDTDSLQGNKSPKTIT-EDSDNKLMVMLDNLERAVRNIELDGKEKELFDAKIRKIY 546
K +G DT +L+ + K + E+ + D L V ++ DG+ +L DA+++K+
Sbjct: 521 KMYGSDTVALKQHFGKKLLELEEEKRAVQQERDRLLAEVESLNADGQTHKLRDAQLQKL- 579
Query: 547 GTVVGKDVTNVVQRKDITDYDFNQKIDAEVEGKGPPAELEYRHKQDYGVSKI-----DVK 601
+ V+Q D+ D +K + +V+ L+ + K D K+ +K
Sbjct: 580 -KTLEAQYMLVIQDLDLQILDLKKKQENQVQ------LLKEKQKSDEAAKKLQEEIHSIK 632
Query: 602 DNKHDYDRKLNPRKQSSFASYHRENIND-FTTKDDYYDSFYAKHKASALTPRHTL---RN 657
K K+ ++ F + + + + + Y +HK AL R L R
Sbjct: 633 AQKVQLQHKIK-QEAEQFRQWKATREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRK 691
Query: 658 HEDKSIYRKDNLRFTNVMSERKVKRLEDSRYN 689
E+ ++ K R ++ RK ++S N
Sbjct: 692 TEEAAMATK---RLKELLEARKSSGRDNSGMN 720
>07_01_0203 + 1469575-1470045
Length = 156
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 70 GVFRLSWDSELATFAQVLANQ----CVLRH 95
GV LSWD LA +AQ ANQ C LRH
Sbjct: 32 GVPALSWDDNLAAYAQGYANQRAGDCALRH 61
>07_01_0199 - 1420982-1421452
Length = 156
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 70 GVFRLSWDSELATFAQVLANQ----CVLRH 95
GV LSWD LA +AQ ANQ C LRH
Sbjct: 32 GVPALSWDDNLAAYAQGYANQRAGDCALRH 61
>07_01_0195 - 1387831-1388301
Length = 156
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 70 GVFRLSWDSELATFAQVLANQ----CVLRH 95
GV LSWD LA +AQ ANQ C LRH
Sbjct: 32 GVPALSWDDNLAAYAQGYANQRAGDCALRH 61
>07_01_0191 - 1354678-1355148
Length = 156
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 70 GVFRLSWDSELATFAQVLANQ----CVLRH 95
GV LSWD LA +AQ ANQ C LRH
Sbjct: 32 GVPALSWDDNLAAYAQGYANQRAGDCALRH 61
>07_01_0187 - 1321525-1321995
Length = 156
Score = 32.3 bits (70), Expect = 1.5
Identities = 17/30 (56%), Positives = 18/30 (60%), Gaps = 4/30 (13%)
Query: 70 GVFRLSWDSELATFAQVLANQ----CVLRH 95
GV LSWD LA +AQ ANQ C LRH
Sbjct: 32 GVPALSWDDNLAAYAQGYANQRAGDCALRH 61
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 32.3 bits (70), Expect = 1.5
Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 9/155 (5%)
Query: 461 VDQNDVNHK-EPTEAVLKSVEERVMDYNKHFGPDTDSLQ--GNKSPKTITEDSDNKLMVM 517
+++ +V + E E ++ EE V + + G + D Q N+ + ED+D
Sbjct: 69 IEEEEVEEEIEEEEEEIEEEEEEVREEVQEAGEEVDEEQQGANEEMQKSKEDADESSKSA 128
Query: 518 LDNLERAVRNIELDGKEKELFDAKIRKIYGTVVGKDVTNVVQRKDITDYDFNQKIDAE-V 576
+ V+ E D EKE+ +AK + +G + ++ + D+ Q D E +
Sbjct: 129 IP-----VQKQEEDEAEKEIIEAKDEEQHGDKLASQEHDIGENGDVDAQGVQQVADGETM 183
Query: 577 EGKGPPAELEYRHKQDYGVSKIDVKDNKHDYDRKL 611
E K ++ + + D K ++ +R L
Sbjct: 184 EAKSEEQNEAKVTSMEHDIEEGDEKASREQGNRAL 218
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 31.5 bits (68), Expect = 2.6
Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 460 IVDQNDVNHKEPTEAVLKSVEERVMDYNKHFGPDTDSLQGNKSPKTITEDSDNKLMVMLD 519
+++Q +V + T ++ E + D + G D +S + +T+TE++D ++V
Sbjct: 2570 MMEQANVQDESSTPTYVEVEEVDLPDETSYIG-DPNSAKLEDEKQTVTEENDKMVIV--- 2625
Query: 520 NLERAVRNIELDGKEK-ELFDAKIRKI--YGTVVGKDVTNVVQRKDITD 565
+E +V+N+ L+ E L D K ++ G G +V V + +IT+
Sbjct: 2626 KVESSVKNLSLEVAENITLEDEKEMEVGNLGKSSGDEVFPVKEDANITE 2674
>12_02_1286 -
27555143-27555191,27555290-27555511,27555911-27556162,
27556683-27557062,27557202-27557311,27557864-27558033,
27558236-27558444,27558528-27558617,27559125-27559264,
27559356-27559463,27559626-27559716,27560736-27560852,
27561497-27561767,27561892-27562193,27562400-27562469,
27563464-27563702,27564613-27564846,27564943-27565179,
27565276-27565734
Length = 1249
Score = 31.1 bits (67), Expect = 3.4
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 495 DSLQGNKSPKTITEDSDNKLMVMLDNLERAVRNIELDGKEKELFDAKIRKIYGTVVGKDV 554
+ L+ +S K+ E+ ++L + + LE + E +E + + KI +I + KD
Sbjct: 761 EKLRRLESEKSNIEEEIDRLEPVKEELETRIGKKE---REVRVLEKKINEIVDRIY-KDF 816
Query: 555 TNVVQRKDITDYDFNQKIDAEV--EGKGPPA--------ELEYRHKQDYGVSKIDVKDNK 604
+ V K+I +Y+ Q DA+ E K + +LEY K+D I +K+ +
Sbjct: 817 SKSVGVKNIREYEERQLKDAQALQERKLSLSNQMSKLKYQLEYEQKRDMQAPIIKLKETR 876
Query: 605 HDYDRKLNP-RKQSSFASYHRENIND 629
+++L +++ S A E I++
Sbjct: 877 ESLEKELKSLQERESEARAEAEQISN 902
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/78 (21%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 590 KQDYGVSKIDVKDNKHDYDRKLNPRKQSSFASYHRENINDFTTKDDYYDSFYAKHKASAL 649
K+D G+S ++D K +D++LN ++ EN+ ++++ S + +A
Sbjct: 426 KEDAGMSTAKLRDEKEVFDKELNAGVEAK--KNLEENMQQLRSRENEILSQERELRAKLN 483
Query: 650 TPRHTLRNHEDKSIYRKD 667
H++ HED+ + ++
Sbjct: 484 KILHSIPKHEDELAHLRE 501
>03_01_0392 +
3051469-3051876,3052414-3052832,3053992-3054061,
3054923-3055016,3056587-3056907,3057298-3057403,
3058807-3058887,3059336-3059402,3059715-3060239,
3060328-3060553,3060628-3060967,3061311-3061659,
3061755-3062357
Length = 1202
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 254 IEDDDCLCNLSEKDKEAIRTCADPDSNCEPTVVL 287
IE D C + ++DKE +PD + PTVVL
Sbjct: 142 IERDQCEYSFDDEDKEVQDALLNPDPSTNPTVVL 175
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.133 0.397
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,629,442
Number of Sequences: 37544
Number of extensions: 974862
Number of successful extensions: 2196
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2194
Number of HSP's gapped (non-prelim): 15
length of query: 757
length of database: 14,793,348
effective HSP length: 88
effective length of query: 669
effective length of database: 11,489,476
effective search space: 7686459444
effective search space used: 7686459444
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 64 (29.9 bits)
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