Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000026-TA|BGIBMGA000026-PA|undefined
(431 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1285 - 32382614-32382720,32383032-32383710,32383816-323839... 40 0.005
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 31 1.8
07_03_1530 + 27502546-27502671,27503487-27503561,27504670-275047... 31 2.4
04_03_0826 + 20103105-20103697,20104222-20104391,20104487-201047... 30 3.1
05_04_0155 + 18595193-18596224,18596863-18597264 30 4.1
03_06_0345 - 33281126-33281783,33281872-33282063,33282175-332822... 29 5.4
12_02_0188 - 15158824-15159215,15159299-15159809,15159885-151600... 29 7.2
11_08_0079 + 28189782-28189907,28190445-28190553,28190876-281909... 29 7.2
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 29 7.2
04_04_1582 - 34590698-34591199,34593849-34594690 29 7.2
04_04_0377 - 24816834-24817049,24817128-24817174,24817262-248174... 29 7.2
01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252... 29 7.2
01_06_0781 + 31962661-31963089,31963174-31963228,31964310-319645... 29 7.2
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810... 29 7.2
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 29 9.5
11_04_0407 + 17335773-17335777,17335930-17336635,17336844-173375... 29 9.5
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 29 9.5
03_03_0107 + 14504065-14504448,14504545-14504922,14506011-145066... 29 9.5
>04_04_1285 -
32382614-32382720,32383032-32383710,32383816-32383926,
32384007-32384065,32384163-32384271,32384387-32384575,
32384650-32385476,32385501-32385633
Length = 737
Score = 39.5 bits (88), Expect = 0.005
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 136 SKPQPTIQYKPIHHFRPARPYHHFAASNIRPSTVYPPS-HISNIERPYKHRDWNQYNQVP 194
S P Q++ I P+ PY H A S PST Y H S P +H+ Y
Sbjct: 541 SYPNTPYQHQQIQSNHPSTPYQHQAQSTSYPSTPYQDQIHSSYPSNPTQHQIHLNYPST- 599
Query: 195 PNPEQSHKT 203
PN QSH T
Sbjct: 600 PNQYQSHST 608
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 31.1 bits (67), Expect = 1.8
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Query: 338 YKKVANRFKVQGDDGIGPFVLESS---STDDNTLPNNGNYKRNNSKRKG 383
Y + + + +DG+ VLESS + DDNT N YKR N+ + G
Sbjct: 1958 YLNAGSSYSISAEDGVEVSVLESSLNDNEDDNT--QNEEYKRINALQPG 2004
>07_03_1530 + 27502546-27502671,27503487-27503561,27504670-27504746,
27505576-27507522,27508478-27508946,27509898-27510079,
27510746-27511208,27511295-27511691,27511810-27511937,
27512106-27512273,27512452-27512559,27512830-27512838
Length = 1382
Score = 30.7 bits (66), Expect = 2.4
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 138 PQPTIQYKPI--HHFRPARPYHHFAASNIRPSTVYPPSHISNIERPYKHRDWNQYNQVPP 195
P P + P H P+ P HH + +P +V PP++ +++ P NQY PP
Sbjct: 1167 PPPVAPFHPPGPHFSGPSVPPHH-GNNYHQPPSVPPPNNAYHLQPPPHPPFPNQY-PYPP 1224
Query: 196 NPEQS 200
P+Q+
Sbjct: 1225 EPQQN 1229
>04_03_0826 +
20103105-20103697,20104222-20104391,20104487-20104716,
20104825-20104933,20104967-20105154,20105818-20105919,
20106114-20106395,20106504-20106625,20106708-20107020,
20107096-20107329,20107477-20107767,20107975-20108286
Length = 981
Score = 30.3 bits (65), Expect = 3.1
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 307 WQALTATAKNHSNVKPSKDIKDRLKTIADMSYKKVANRFKVQGDDGIGPFVLESSSTDDN 366
WQ + A H + +++K + + ++ A ++ G+D P + S+STD
Sbjct: 546 WQEIRAVQNMHEVA-----LTNKVKYSLNQNDQEDAVDIELVGEDKTSPASMLSTSTDKP 600
Query: 367 TLPNNGNYKRNNSKRKGVAF-EATTDLYSKFYGLDEEAEKK 406
+L + R S G+ + T D GLD+E K+
Sbjct: 601 SLVGSEEIARVTSLWSGIPVQQLTADERKLLVGLDDELRKR 641
>05_04_0155 + 18595193-18596224,18596863-18597264
Length = 477
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 245 EFKLLNQSTKPLRINQPNKLSRPGSAYRNTELKTKIFPN 283
EF++ NQ T+ +N+ KL A E++TK PN
Sbjct: 370 EFRVFNQFTEQFSVNELAKLVTAAGAKLGLEVQTKSVPN 408
>03_06_0345 -
33281126-33281783,33281872-33282063,33282175-33282217,
33282751-33282874,33282966-33283058,33284484-33284685,
33284751-33284857,33285462-33285543,33285629-33285666,
33285751-33285837,33286324-33286434,33286554-33286904
Length = 695
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 191 NQVPPNPEQSHKTIHDY-ERDKLQKIYRQNNNNINLYAHKEPNRIRNKVVYKYEDEFKLL 249
N P E+ HK ++ + + + N +N + R R +V Y ++D + +
Sbjct: 346 NNYLPEMEKIHKKKERLLKKQQREALLLDNRLTVNGFTSVRSRRERKRVTYTFDDYERSI 405
Query: 250 NQSTKPLR 257
N++ KP +
Sbjct: 406 NEAIKPTK 413
>12_02_0188 -
15158824-15159215,15159299-15159809,15159885-15160015,
15160107-15160310,15160385-15161066,15161158-15161414,
15161491-15161631,15161731-15162136
Length = 907
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 306 NWQALTATAKNHSNVKPSKDIKDRLKTIADMSYKKVANRFKVQGDD---GIGPFVLESSS 362
NW SN + K+ D L+ ++D+S+ + N+ K D+ P + E S+
Sbjct: 597 NWSTFAFVHTKQSNAQVRKEDDDPLQRLSDLSFYESNNQIKKWMDNARSNANPELDEDST 656
Query: 363 TDDNTLPN 370
D +P+
Sbjct: 657 ESDAPVPS 664
>11_08_0079 +
28189782-28189907,28190445-28190553,28190876-28190958,
28191500-28191562,28191658-28192854,28193247-28193310,
28193338-28193426,28194404-28194463,28195442-28195547,
28196057-28196069,28196940-28197111
Length = 693
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 334 ADMSYKKVANRFKVQ---GDDGIGPFVLESSSTDDNTLPNNGNYKRNNSKRKGVAFEATT 390
A + + + +RF+++ GD G G L S +D P+ GN R V E +
Sbjct: 39 APLQSRGMVDRFRLRAKGGDGGNGCISLRRSRSDRQGKPDGGNGGRGGD----VILECSR 94
Query: 391 DLYSKFYGLDEEAEKKYGSSGIS 413
++ F GL + G++G+S
Sbjct: 95 SVWD-FSGLQHHMKASRGANGVS 116
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 6/99 (6%)
Query: 302 VEFDNWQALTATAKNHSNVKPSKDIKDRLKTIADMSYK--KVANRFKVQGDDGIGPFVLE 359
+EFD W +TA N + + + + D L K +RF D G F L+
Sbjct: 812 LEFDPWDESYSTANNFAKMLSASEKNDVLFDAPSWKTKTSNSESRFSFARQDNQGSF-LD 870
Query: 360 SSSTDDNTLPNNGNYKRN---NSKRKGVAFEATTDLYSK 395
SS + + N +N N + G+AF++ + ++K
Sbjct: 871 SSMRNYKSEQNFSLLSQNSHGNIYQSGIAFQSPEEGFAK 909
>04_04_1582 - 34590698-34591199,34593849-34594690
Length = 447
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/35 (31%), Positives = 25/35 (71%)
Query: 56 SFLSSLFKQDENDEGGGGLFEKIAQPLQGGTLNDI 90
+F ++L +++E G GL+EK+A+ ++G T +++
Sbjct: 169 AFENALATVGDDEEEGDGLWEKLAEAVEGKTADEV 203
>04_04_0377 -
24816834-24817049,24817128-24817174,24817262-24817406,
24818308-24818409,24818686-24818781
Length = 201
Score = 29.1 bits (62), Expect = 7.2
Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
Query: 290 NKDSKDGYFHVPVEFDNWQALTATAKNHSNVKPSKDIKDRLKTIADMSYKKVANRFKVQG 349
+KD + ++ + Q L A +NHS K S K++ A KK R
Sbjct: 78 DKDKMMREYRAQLDAERAQKL-ALGRNHSRSKSSSSKKEKKDKDAKKRSKK--RRKHRSS 134
Query: 350 DDGIGPFVLESSSTDDNTLPNNGNYKRNNSKR 381
+ ESSS+DD + + R+ SKR
Sbjct: 135 SESSSSSSSESSSSDDEDRDSRKSRSRSRSKR 166
>01_06_1763 +
39723596-39723691,39724030-39724672,39724773-39725275,
39725786-39725905,39726356-39726421,39727146-39727256,
39727650-39727726,39727996-39728063,39728384-39728497,
39728593-39728774,39728926-39728994,39729294-39729449,
39729657-39729734
Length = 760
Score = 29.1 bits (62), Expect = 7.2
Identities = 21/105 (20%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 314 AKNHSNVKPSKDIKDRLKTIADMSYKKVANRF-KVQGDDGIGPFVLESSSTDDNTLPNNG 372
A+ P KD+ + K A + +V++ +V G P + E S T+ ++ ++G
Sbjct: 162 ARKREEHSPDKDVTLKSKLSAFGNSDEVSHSSDEVLLSQGRNPVLREVSDTEQSSSYSSG 221
Query: 373 NYKRNNSKRKGVAFEATTDLYSKFYGLDEEAEKKYGSSGISYTEY 417
+ + + A D++ +F +++ + G + S EY
Sbjct: 222 SLFGKLEGTQSQGYSANNDIFGRFRATSKDSSQADGLAYASSREY 266
>01_06_0781 +
31962661-31963089,31963174-31963228,31964310-31964557,
31965080-31965281,31965793-31965912,31965976-31966100,
31966182-31966288,31966726-31966792
Length = 450
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 136 SKPQPTIQYKPIHHFRPARPYHHFAASNIRPSTVYPPSHISNIER--PYKHRDWNQYNQV 193
+ P P+ P+ R + P+ + S +RP+ PP+ + R P D+ +++
Sbjct: 78 ASPYPSPGLPPLPSRRSSSPFAISSPSPLRPAAAMPPADLPRPPRRGPLAIVDY-AHDET 136
Query: 194 PPNPEQSHKTIHDYERDKLQKIYRQNN 220
+PEQ I+ +R L + N
Sbjct: 137 AMSPEQEDGEINGIDRSGLDAQVAEGN 163
>01_05_0320 -
20874691-20875230,20879337-20879590,20880014-20881087,
20881259-20881511,20881548-20882369
Length = 980
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 305 DNWQALTATAKNHSNVKPSKDIKDRLKTIAD----MSYKKVANRFKVQGDDGIGPFVLES 360
DN + + N+K S+ IK RLK++ + Y + A Q G+ V++S
Sbjct: 911 DNQTVIIKVNSSKDNMKSSRHIKRRLKSVHSGVIALDYVQTARNLADQFTKGLPRNVIDS 970
Query: 361 SSTDDNTLP 369
+S + + +P
Sbjct: 971 ASREMDLIP 979
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 28.7 bits (61), Expect = 9.5
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 302 VEFDNWQALTATAKNHSNVKPSKDIKDRLKTIADMSYK--KVANRFKVQGDDGIGPFVLE 359
+EFD W +TA N + + + + D L K +RF D G +L+
Sbjct: 755 LEFDPWDESYSTANNFAKMLSASEKNDVLFDARSWKTKTSNSESRFSFARQDNQGS-LLD 813
Query: 360 SS-----STDDNTLPNNGNYKRNNSKRKGVAFEATTDLYSK 395
SS S + +LP+ ++ N + G+AF++ + +SK
Sbjct: 814 SSMRNYKSEQNFSLPSQNSH--GNIYQSGIAFQSPEEGFSK 852
>11_04_0407 +
17335773-17335777,17335930-17336635,17336844-17337542,
17340710-17340724,17341479-17342126
Length = 690
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 16 QVLAEETATLKTQPATDRFVKILEGLGLDFQQDSSLIEAPSFLSSLFKQDENDE 69
++++ + T K QPA+D + L G + +++ +S I S LSSL +D DE
Sbjct: 626 KIVSRTSLTKKKQPASDLDIWKLLGYNIYYKRFASNIRLSSRLSSLV-EDAQDE 678
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 9/77 (11%)
Query: 131 IDYFFSKPQPTIQYKPIH--HFRPARPYHHFAASNIRPSTVYPPSHISNIERPY-KHRDW 187
+ + F+ P P +++ H H P P+HH P +PP H P+ H
Sbjct: 20 LSHIFAPPPPHLRHPHHHPPHHHPHPPHHH------PPHHPHPPHHPHPPHHPHPPHHPH 73
Query: 188 NQYNQVPPNPEQSHKTI 204
++ P+P+ + + I
Sbjct: 74 PPHHHPHPHPDPAAEAI 90
>03_03_0107 +
14504065-14504448,14504545-14504922,14506011-14506619,
14507110-14507237,14507829-14507832
Length = 500
Score = 28.7 bits (61), Expect = 9.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 140 PTIQYKPIHHFRPARPYHHFAASNIRPSTVYPP 172
P Y +HH R RP AAS+ P+ PP
Sbjct: 90 PDDGYNYLHHLRELRPSAAAAASSFAPNQTAPP 122
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.134 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,206,987
Number of Sequences: 37544
Number of extensions: 599834
Number of successful extensions: 1417
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1412
Number of HSP's gapped (non-prelim): 20
length of query: 431
length of database: 14,793,348
effective HSP length: 84
effective length of query: 347
effective length of database: 11,639,652
effective search space: 4038959244
effective search space used: 4038959244
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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