Silkworm BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000026-TA|BGIBMGA000026-PA|undefined
         (431 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10886-1|AAB36687.1| 1337|Homo sapiens density enhanced phosphat...    31   7.9  
D37781-1|BAA07035.1| 1337|Homo sapiens protein-tyrosine phosphat...    31   7.9  
AF387844-1|AAM69432.1| 1305|Homo sapiens protein tyrosine phosph...    31   7.9  

>U10886-1|AAB36687.1| 1337|Homo sapiens density enhanced phosphatase-1
            protein.
          Length = 1337

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 215  IYR-QNNNNINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTKPLRINQPNKLSRPGSAYRN 273
            IY+ +N N +++Y      R+   ++ + ED++  LNQ    L I +  K S+    Y+N
Sbjct: 1256 IYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCV--LDIVRSQKDSKVDLIYQN 1313

Query: 274  TELKTKIFPN-SPTKYFNK 291
            T   T I+ N +P   F K
Sbjct: 1314 TTAMT-IYENLAPVTTFGK 1331


>D37781-1|BAA07035.1| 1337|Homo sapiens protein-tyrosine phosphatase
            protein.
          Length = 1337

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 215  IYR-QNNNNINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTKPLRINQPNKLSRPGSAYRN 273
            IY+ +N N +++Y      R+   ++ + ED++  LNQ    L I +  K S+    Y+N
Sbjct: 1256 IYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCV--LDIVRSQKDSKVDLIYQN 1313

Query: 274  TELKTKIFPN-SPTKYFNK 291
            T   T I+ N +P   F K
Sbjct: 1314 TTAMT-IYENLAPVTTFGK 1331


>AF387844-1|AAM69432.1| 1305|Homo sapiens protein tyrosine phosphatase
            receptor type J protein.
          Length = 1305

 Score = 31.1 bits (67), Expect = 7.9
 Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 5/79 (6%)

Query: 215  IYR-QNNNNINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTKPLRINQPNKLSRPGSAYRN 273
            IY+ +N N +++Y      R+   ++ + ED++  LNQ    L I +  K S+    Y+N
Sbjct: 1224 IYQIENENTVDVYGIVYDLRMHRPLMVQTEDQYVFLNQCV--LDIVRSQKDSKVDLIYQN 1281

Query: 274  TELKTKIFPN-SPTKYFNK 291
            T   T I+ N +P   F K
Sbjct: 1282 TTAMT-IYENLAPVTTFGK 1299


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.315    0.134    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,719,949
Number of Sequences: 224733
Number of extensions: 3066742
Number of successful extensions: 6207
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6207
Number of HSP's gapped (non-prelim): 3
length of query: 431
length of database: 73,234,838
effective HSP length: 92
effective length of query: 339
effective length of database: 52,559,402
effective search space: 17817637278
effective search space used: 17817637278
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 67 (31.1 bits)