Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000026-TA|BGIBMGA000026-PA|undefined
(431 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35640.1 68417.m05061 serine O-acetyltransferase, putative si... 34 0.16
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 33 0.28
At5g25090.1 68418.m02973 plastocyanin-like domain-containing pro... 33 0.49
At4g30870.1 68417.m04383 repair endonuclease family protein cont... 31 1.5
At1g29170.1 68414.m03569 expressed protein ; expression supporte... 31 2.0
At1g07310.1 68414.m00778 C2 domain-containing protein contains s... 31 2.0
At3g63070.1 68416.m07084 PWWP domain-containing protein putative... 30 3.4
At1g01810.1 68414.m00100 hypothetical protein 30 3.4
At5g54920.1 68418.m06840 expressed protein 29 4.5
At2g46250.1 68415.m05751 myosin heavy chain-related contains wea... 29 4.5
At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS cla... 29 4.5
At1g71420.1 68414.m08249 pentatricopeptide (PPR) repeat-containi... 29 4.5
At5g03320.1 68418.m00283 protein kinase, putative similar to ser... 29 6.0
At4g11720.1 68417.m01870 hypothetical protein 29 6.0
At1g07520.1 68414.m00805 scarecrow transcription factor family p... 29 6.0
At4g39450.1 68417.m05582 expressed protein 29 7.9
At2g47540.1 68415.m05933 pollen Ole e 1 allergen and extensin fa... 29 7.9
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 29 7.9
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 29 7.9
At1g14260.2 68414.m01690 zinc finger (C3HC4-type RING finger) fa... 29 7.9
At1g14260.1 68414.m01689 zinc finger (C3HC4-type RING finger) fa... 29 7.9
>At4g35640.1 68417.m05061 serine O-acetyltransferase, putative
similar to serine acetyltransferase, Arabidopsis
thaliana, GI:905391; contains Pfam profile PF00132:
Bacterial transferase hexapeptide (four repeats)
Length = 355
Score = 34.3 bits (75), Expect = 0.16
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 38 LEGLGLDFQQDSSLIEAPSFLSSLFK-QDENDEGGGGLFEKIAQPLQGGTLNDIIVPVL 95
+ G DF SSL P +S F +D+ + G FE+I GTLN + PVL
Sbjct: 4 INGENRDFSSSSSLSSLPMIVSRNFSARDDGETGDEFPFERIFPVYARGTLNPVADPVL 62
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 33.5 bits (73), Expect = 0.28
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 108 PMGLEALSLITLVPVMTRAIPGVIDYFFSKPQPTIQY--KPIHHFRPARPYH 157
PM +L+ L +T +YF+S P P +++ P+ H+ P YH
Sbjct: 4 PMASLVATLLVLTISLTFVSQSTANYFYSSPPPPVKHYTPPVKHYSPPPVYH 55
>At5g25090.1 68418.m02973 plastocyanin-like domain-containing
protein
Length = 186
Score = 32.7 bits (71), Expect = 0.49
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 214 KIYRQNNNNINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTKPLRINQPNKLSRPGSAYRN 273
KI + ++N +A R+ + +V+KY++E + Q TK IN + P + Y N
Sbjct: 36 KIPSSPSESLNKWAESLRFRVGDTLVWKYDEEKDSVLQVTKDAYIN--CNTTNPAANYSN 93
Query: 274 TELKTKIFPNSPTKYFNKDSK 294
+ K K+ + P +F SK
Sbjct: 94 GDTKVKLERSGP-YFFISGSK 113
>At4g30870.1 68417.m04383 repair endonuclease family protein
contains Pfam PF02732 : ERCC4 domain; similar to repair
endonuclease (TIGR:At5g41150) [Arabidopsis thaliana]
Length = 661
Score = 31.1 bits (67), Expect = 1.5
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 325 DIKDRLKTIADMSYKKVANRFKVQGDDGIGPFVLESSSTDDNTLPNNGNYKRNNSKRK 382
D KD + T+ D+S K ++ V+ G +ESS +D LP+N K+ N K++
Sbjct: 50 DAKDPINTLKDLSQIKGFGKWMVKLMKGYFDTAVESSEQED--LPDNRAGKKANGKKR 105
>At1g29170.1 68414.m03569 expressed protein ; expression supported
by MPSS
Length = 1016
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 32 DRFVKILEGLGLDFQQDSSLIEAPSFLSSLFKQDENDEGGGGL 74
D +I+E LGL + S ++EA S + +L ++ EG GG+
Sbjct: 321 DEKAEIVESLGLQTDEASEMVEANSVVDTLDEKPSYGEGIGGV 363
>At1g07310.1 68414.m00778 C2 domain-containing protein contains
similarity to shock protein SRC2 [Glycine max]
gi|2055230|dbj|BAA19769 ; contains Pfam profile
PF00168:C2 domain
Length = 352
Score = 30.7 bits (66), Expect = 2.0
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 138 PQPTIQYKPIHHFRPARPYHHFAASNIRPSTVYPPSHISNIERPYKHRDWNQYNQVP-PN 196
P P Q +P+ ++ + H+++ PS PP + I P RD+ +++Q P P+
Sbjct: 146 PPPRPQSQPLDYYSAPQGNHYYS-----PSPPPPPPPQAPITAPSPQRDYREFSQSPSPS 200
Query: 197 P 197
P
Sbjct: 201 P 201
>At3g63070.1 68416.m07084 PWWP domain-containing protein putative
transcription factor HUA2, Arabidopsis thaliana,
EMBL:AF116556
Length = 1347
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 26 KTQPATDRFVKILEGLGLDFQQDSSLIEAPSFLSS--LFKQDENDEGGGGLFEKIAQPLQ 83
+T+ A D V+ +EG+ +D +S ++ F L +DE + GG FE + +
Sbjct: 999 RTERALDDPVRDMEGILVDEYGSNSTLQLHGFCIPPILRDEDEGSDSDGGDFESVTPEHE 1058
Query: 84 GGTLNDIIVP 93
+L + + P
Sbjct: 1059 SRSLEEHVTP 1068
>At1g01810.1 68414.m00100 hypothetical protein
Length = 160
Score = 29.9 bits (64), Expect = 3.4
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 198 EQSHKTIHDYERDKLQKIYRQNNNNINLYAHKEPN---RIRNKVVYKYEDEFKLLNQSTK 254
E+SH+ +RDK +K + +NNN L +P +R Y ++ FKL +
Sbjct: 64 EKSHRRRETRKRDKKKKKKKDSNNNTKLVIGTKPETDAELRRWFSY-FDKSFKL--SLPR 120
Query: 255 PLRINQPNKLS 265
+++ P KL+
Sbjct: 121 KVKLTSPRKLN 131
>At5g54920.1 68418.m06840 expressed protein
Length = 517
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Query: 139 QPTIQYKPI--HHFRPAR--PYHHFAASNIRPSTVYPPSHIS-NIERPYKHRDWNQYNQV 193
QP I P H P++ PY + A N + +P + I R HR QY+ V
Sbjct: 341 QPEIGISPFLSHASSPSKFVPYTNLATGNAGGGSHFPQHMVGPTINRGQPHRFTTQYHSV 400
Query: 194 PPNP 197
P P
Sbjct: 401 QPTP 404
>At2g46250.1 68415.m05751 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, muscle
(Swiss-Prot:P05661) [Drosophila melanogaster]
Length = 468
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 196 NPEQSHKTIHDYERDKLQKIYRQNN-NNINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTK 254
+PE S + + D+E + + + +N+ N+N+ ++ +R + + E + L S K
Sbjct: 407 HPESSPRNVDDHESQEKSRTFSKNHPRNVNVMIREDNHRTLKDKLMEARVESRRLRSSLK 466
Query: 255 P 255
P
Sbjct: 467 P 467
>At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 438
Score = 29.5 bits (63), Expect = 4.5
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 62 FKQDENDEGGGGLFEKIAQPLQGGTLNDIIVPV-LPFLKHVLTFVVVPMGLEALSLITLV 120
FK DE E G + ++ Q ++G + ++V V P L + + LE L L+T++
Sbjct: 70 FKDDEELERGRPIPPELRQAIKGSRIAVVVVSVTYPASSWCLEELREILKLEKLGLLTVI 129
Query: 121 PVMTRAIP 128
P+ P
Sbjct: 130 PIFYEINP 137
>At1g71420.1 68414.m08249 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 745
Score = 29.5 bits (63), Expect = 4.5
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 307 WQALTATAKNHSNVKPSKDIKDRLKTIAD----MSYKKVANRFKVQG 349
W AL + + H N + K D+LK + + MSY +++N + +G
Sbjct: 538 WIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEG 584
>At5g03320.1 68418.m00283 protein kinase, putative similar to
serine/threonine-protein kinase NAK [Arabidopsis
thaliana] SWISS-PROT:P43293
Length = 420
Score = 29.1 bits (62), Expect = 6.0
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 282 PNSPTKYFNKDSKDGYFHVPVEFDNWQALTATAKNHSNVKPSKDIKDRLKTIADMSYKKV 341
P SPT F+ +K G P + +++T +N + +++ R TI D+ K
Sbjct: 20 PVSPTSNFSDVNKSGSDFSPRDVSGTSTVSSTGRNSNTSMSARENNLREFTIGDL--KSA 77
Query: 342 ANRFKVQGDDGIGPF 356
F G G G F
Sbjct: 78 TRNFSRSGMIGEGGF 92
>At4g11720.1 68417.m01870 hypothetical protein
Length = 658
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 172 PSHISNIERPYKHRDWNQYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINLYAHK 229
PS + R + H ++ Q HK H + D LQK+ + +++ + Y H+
Sbjct: 562 PSRADVVNRHHHHHKHRHHHNHHRRTHQRHKHHHGQDDDVLQKMMLERDHSDSHYYHQ 619
>At1g07520.1 68414.m00805 scarecrow transcription factor family
protein similar to GB:AAD24412 from [Arabidopsis
thaliana] (Plant J. 18 (1), 111-119 (1999)); contains
Pfam profile: PF03514 GRAS family transcription factor
Length = 695
Score = 29.1 bits (62), Expect = 6.0
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 272 RNTELKTKIFPNSPTKYFNKDSK-DGYFHVPVEFDNWQALTATAKNHSNVKPSKD 325
R E +K PN+ FN + + + V VE + W A++ T KNH + +D
Sbjct: 196 RGLEEASKFLPNTDQWIFNLEPEMERVVPVKVE-EGWSAISKTRKNHHEREEEED 249
>At4g39450.1 68417.m05582 expressed protein
Length = 1553
Score = 28.7 bits (61), Expect = 7.9
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 1/114 (0%)
Query: 306 NWQALTATAKNHSNVKPSKDIKDRLKTIADMSYKKV-ANRFKVQGDDGIGPFVLESSSTD 364
+W L A +V P + L+ A + N + + IG V+ ++S
Sbjct: 398 SWSILALIASCFPDVSPLSCLTIWLEITAARETSSIKVNDITTKIAENIGAAVVSTNSLP 457
Query: 365 DNTLPNNGNYKRNNSKRKGVAFEATTDLYSKFYGLDEEAEKKYGSSGISYTEYE 418
+ +Y R N KR+ + + DL + L+ A K + S E E
Sbjct: 458 TDARGVQFHYNRRNPKRRRLTAHTSVDLLASANSLNISAGKTFCSHRTEAAEDE 511
>At2g47540.1 68415.m05933 pollen Ole e 1 allergen and extensin
family protein contains Pfam domain, PF01190: Pollen
proteins Ole e I family
Length = 173
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 337 SYKKVANRFKVQGDDGIGPFVLESSSTDDNTLPN 370
+Y+ + N+ K++ +GPFV S T D ++PN
Sbjct: 139 NYRLLENKLKMKLFT-VGPFVFSSEETQDKSIPN 171
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 109 MGLEALSLITLVPVMTRAIPGVIDYFFSKPQPTIQ-YKPIHHFR-PARPYHHFAASNIRP 166
MG S + L + +YF+S P P ++ Y P ++ P P H++ +
Sbjct: 1 MGAPMASFLVLAFSLAFVSQTTANYFYSSPPPPVKHYSPPPVYKSPPPPVKHYSPPPVYK 60
Query: 167 STVYPPSHIS 176
S P H S
Sbjct: 61 SPPPPVKHYS 70
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 109 MGLEALSLITLVPVMTRAIPGVIDYFFSKPQPTIQ-YKPIHHFR-PARPYHHFAASNIRP 166
MG S + L + +YF+S P P ++ Y P ++ P P H++ +
Sbjct: 1 MGAPMASFLVLAFSLAFVSQTTANYFYSSPPPPVKHYSPPPVYKSPPPPVKHYSPPPVYK 60
Query: 167 STVYPPSHIS 176
S P H S
Sbjct: 61 SPPPPVKHYS 70
>At1g14260.2 68414.m01690 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 1 MANIYAISIFASLLLQVLAEETATLKTQPATDRFVKILEGLGLDFQQDSSLIEA 54
M+N + + L+ VLAE +++T+ D + I +G + +++ SLI +
Sbjct: 1 MSNHHTVVYVNGLVRPVLAEAEYSMRTESPADNAIDIYDGDTTENEEEDSLISS 54
>At1g14260.1 68414.m01689 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 265
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 1 MANIYAISIFASLLLQVLAEETATLKTQPATDRFVKILEGLGLDFQQDSSLIEA 54
M+N + + L+ VLAE +++T+ D + I +G + +++ SLI +
Sbjct: 1 MSNHHTVVYVNGLVRPVLAEAEYSMRTESPADNAIDIYDGDTTENEEEDSLISS 54
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.134 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,027,759
Number of Sequences: 28952
Number of extensions: 520156
Number of successful extensions: 1514
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1506
Number of HSP's gapped (non-prelim): 22
length of query: 431
length of database: 12,070,560
effective HSP length: 83
effective length of query: 348
effective length of database: 9,667,544
effective search space: 3364305312
effective search space used: 3364305312
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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