Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000026-TA|BGIBMGA000026-PA|undefined
(431 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 32 0.18
SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit ... 31 0.41
SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces p... 30 0.55
SPAC343.02 |img1||mitochondrial ribosomal protein subunit L19|Sc... 29 0.95
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 29 1.3
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 28 2.2
SPCC1919.03c |||AMP-activated protein kinase beta subunit |Schiz... 28 2.9
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 28 2.9
SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces po... 27 3.8
SPBC29B5.02c |isp4||OPT oligopeptide transporter family |Schizos... 27 5.1
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 6.7
SPAC18G6.14c |rps7||40S ribosomal protein S7|Schizosaccharomyces... 27 6.7
SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyce... 27 6.7
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 27 6.7
SPCC4G3.05c |mus81||Holliday junction resolvase subunit Mus81|Sc... 26 8.9
SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25 |Schizosac... 26 8.9
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 26 8.9
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 26 8.9
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 26 8.9
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 8.9
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 26 8.9
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 26 8.9
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 31.9 bits (69), Expect = 0.18
Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 307 WQALTATAKNH---SNVKPSKDIKDRLKTIADMSYKKVANRFKVQGDDGIGPFVLESSST 363
W + AK+ + KP++D + +LK ++Y +++N K + G V +
Sbjct: 613 WYEIHKEAKSEIEKDSSKPTEDQESKLKVYGRVAYSRISNLHKSSKEKGKDSQVRVALHK 672
Query: 364 DDNTLPN----NGNYKRNNSKRKGVAFEATTDLYS-KFYGLDEEAE 404
++ L N +GN +R+ KR+ +T + +G+D+ +
Sbjct: 673 ENTALNNIVLPSGNLQRSEEKRRAALSGSTWHSPAFNIFGVDDSED 718
>SPCC1919.14c |bdp1||transcription factor TFIIIB complex subunit
Bdp1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 507
Score = 30.7 bits (66), Expect = 0.41
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 208 ERDKLQKIYRQNNNNINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTKPLRINQPNKLSRP 267
+ +K K Q + L A+ P R R ++ K++ E + P R+NQ K+ +P
Sbjct: 372 DTEKFYKALSQWGTDFALIANMFPTRNRRQIKLKFKQE-----ERRNPARVNQALKIKKP 426
Query: 268 GSAYRNTELKTKIF 281
+++ K+F
Sbjct: 427 IDMEEYSKVSGKVF 440
>SPAC13G7.10 |mug152||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 390
Score = 30.3 bits (65), Expect = 0.55
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 306 NWQALTATAKNHSNVKPSKDIKDRLKTIADMSYKK 340
NW+ + + H + D+KDR +TI YKK
Sbjct: 77 NWKKILLDERFHFTNRSPNDLKDRFRTILPEDYKK 111
>SPAC343.02 |img1||mitochondrial ribosomal protein subunit
L19|Schizosaccharomyces pombe|chr 1|||Manual
Length = 182
Score = 29.5 bits (63), Expect = 0.95
Identities = 14/58 (24%), Positives = 23/58 (39%)
Query: 190 YNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINLYAHKEPNRIRNKVVYKYEDEFK 247
YN P P HK + K + + + + ++ +PNR+R V E K
Sbjct: 29 YNFPKPVPGPKHKDVLSLFEKKCRSVLDEQSERFKMFHRSQPNRVRPGAVLLVESYSK 86
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 29.1 bits (62), Expect = 1.3
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Query: 137 KPQPTIQYKPIHHFRPARPYHHFAASNIRPSTVYPPSHISNIERPYKHRDWNQYNQV-PP 195
KPQ K + F H SNI S + P H S + RD++ N + PP
Sbjct: 351 KPQRACSQKFLDEFY----LHDLPESNIHDSGNFHPIHSSVDNNSFSQRDFDSPNSINPP 406
Query: 196 NPEQSH 201
+P S+
Sbjct: 407 SPLMSN 412
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Query: 353 IGPFVLESSSTDDNTLPNNGNYKRNN-SKRKGVAFEATTDLYSKFYGLDEEAEKKYGSS 410
+ PF S T++N +PN+ N +KR E F E+A KK +S
Sbjct: 786 VSPFAAVSEKTNENNIPNDTTKTNGNATKRTLEQTEDAKPFAFSFGSTTEQANKKASTS 844
>SPCC1919.03c |||AMP-activated protein kinase beta subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 298
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 15 LQVLAEE--TATLKTQPATDRFVKILEGLGLDFQQDSSLIEAPSFLSSLFKQDENDEGGG 72
+Q+L E T L+ +P T RF +++G+ + +A L + + + N++ G
Sbjct: 125 IQLLKSEDYTVLLQLRPGTQRFKFLVDGIWCCSSDFPTATDAEGNLYNYLEVEANEKLGA 184
Query: 73 GLFEKIAQ 80
+ E+++Q
Sbjct: 185 SIDERLSQ 192
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 27.9 bits (59), Expect = 2.9
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 6/59 (10%)
Query: 353 IGPFVLESSSTDDNTLPNNGNYKRNNSKRKGVAFEATTDLYSKFYGLDEEAEKKYGSSG 411
IG F + SSS + N+ NN N NNS + SK L A GSSG
Sbjct: 509 IGSF-MGSSSNNSNSSNNNSNTSNNNSNTSN-----NESMVSKLSSLSGMASSFLGSSG 561
>SPAC222.10c |byr4||two-component GAP Byr4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 665
Score = 27.5 bits (58), Expect = 3.8
Identities = 19/110 (17%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 177 NIERPYKHRDWN--QYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINLYAHKEPNRI 234
N RP K++D + ++N + + S + + D L+K Y + N+ + +
Sbjct: 110 NTLRPNKYQDADVDEFNTIRASETASQRPPIPFSSDTLKKTYLSSENDARYPSVSDSPYC 169
Query: 235 RNKVVYKYEDEFKLLNQSTKPLRINQPNKLSRPGSAYRNTELKTKIFPNS 284
++ +ED+F++ + +++ P +++ + E + P+S
Sbjct: 170 ESEGFSSFEDDFEIDPDTDLNSILHRKQNRMDPKASFSSVEQSSLRTPSS 219
>SPBC29B5.02c |isp4||OPT oligopeptide transporter family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 785
Score = 27.1 bits (57), Expect = 5.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 316 NHSNVKPSKDIKDRLKTIADMSYKKVANRFKVQGDDGIGPFVLESSSTDDNTLPNN 371
+HS+ SKDIK K+ D+ + +++ + + D TDD ++P N
Sbjct: 35 SHSDDSLSKDIKKDTKSFLDVEHGEISTVDEFEEDSPYPEVRAAVPPTDDPSMPCN 90
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.6 bits (56), Expect = 6.7
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
Query: 138 PQPTIQYKPIHHFRPARPYHHFAASNIRPSTVYPPSHI---SNIERPYKHRDWNQYNQVP 194
P P + +KP H P P HH ++ P PP H ++ P H + ++ P
Sbjct: 208 PPPPMHHKPGEHM-PPPPMHHEPGEHMPP----PPMHHEPGEHMPPPPMHHEPGEHMPPP 262
Query: 195 P 195
P
Sbjct: 263 P 263
>SPAC18G6.14c |rps7||40S ribosomal protein S7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 195
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/69 (26%), Positives = 29/69 (42%)
Query: 247 KLLNQSTKPLRINQPNKLSRPGSAYRNTELKTKIFPNSPTKYFNKDSKDGYFHVPVEFDN 306
++L + + R+ Q SR +A N L+ +FP + + DG + V DN
Sbjct: 99 RILPKPGRKSRVTQKRPRSRTLTAVHNAILEDIVFPTEIIGKRTRQATDGRKTIKVFLDN 158
Query: 307 WQALTATAK 315
A T K
Sbjct: 159 RDANTVDYK 167
>SPAC140.03 |arb1||argonaute binding protein 1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 399
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Query: 339 KKVANRFKVQGDDGIGPFVLESSSTDDNTLPNNGNYKRN 377
K + NR K +G G P+ E T + L N Y RN
Sbjct: 29 KSLGNRRKKRGLSGWEPYFQEPELTAEEKLENETLYSRN 67
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 26.6 bits (56), Expect = 6.7
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 282 PNSPTKYFNKDSKDGYFHVPVEFDNWQALTATAKNHSNVKPSKDIKDRLKTIADMSYKKV 341
PN T +FNK+SK E + ++ + H + S I+D T + S +
Sbjct: 304 PNKLTAFFNKNSKASSISSAEEHPSNIDDSSIERRHYDSNHSSQIRDHPSTNNNASSYQN 363
Query: 342 ANRFKVQGDD 351
N +G+D
Sbjct: 364 FNETSDEGED 373
>SPCC4G3.05c |mus81||Holliday junction resolvase subunit
Mus81|Schizosaccharomyces pombe|chr 3|||Manual
Length = 608
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 48 DSSLIEAPSFLSSLFKQDENDEGGGGL 74
DSSL + P+F++S+ K + + GG L
Sbjct: 231 DSSLCQPPNFVTSINKAGSSSDHGGEL 257
>SPBC146.05c |cwf25||complexed with Cdc5 protein Cwf25
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 26.2 bits (55), Expect = 8.9
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 183 KHRDWNQYNQVPPNPEQSHKTIHDYE-RDKLQKIYRQNNNNINLYAHKEPNRIRNK 237
+HRD + + + E+S H + R+ ++ YR + NN H + R R+K
Sbjct: 171 RHRDRHHRSNQDRSRERSDNEQHSSDKREHSRRSYRNDRNNWRERTHNDRYRHRDK 226
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 26.2 bits (55), Expect = 8.9
Identities = 15/60 (25%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 180 RPYKHRDWNQYNQVPPNPEQSHKTIHDY----ERDKLQKIYRQNNNNINLYAHKEPNRIR 235
R K D+ + Q PN + K HD+ + L + + N+N + NR R
Sbjct: 44 RSGKREDFEPFFQDTPNTKSLSKHFHDFTMNASLETLPSVEKPRGRNMNAFEETSWNRFR 103
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 26.2 bits (55), Expect = 8.9
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 339 KKVANRFKVQGDDGIGPFVL--ESSSTDDNTLPNNGNYKRNNSKRKGVAFEATTDLYSKF 396
KK N+ D + L E D+ +P + + K K AFEA D S
Sbjct: 40 KKKLNKASAFNSDNDSNYDLKPEDDEVDEEVVPVKKKPSKKSKKAKANAFEAFADEQSVE 99
Query: 397 YGLDEEAEK 405
+E++EK
Sbjct: 100 EEEEEDSEK 108
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 347 VQGDDGIGPFVLESSSTDDNTLPNNGNYKRNNSKRK 382
V + +G + ++ + DDN + NN N N KRK
Sbjct: 712 VYEERSLGIYAADTENDDDNNI-NNNNNDNNTPKRK 746
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 26.2 bits (55), Expect = 8.9
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 109 MGLEALSLITLVPVMTRAIPGVIDYF--FSKPQPTIQYKP 146
+ +E +S ITL M ++ GVIDYF K Q +QY+P
Sbjct: 285 LSVEEIS-ITLSDHMYYSLLGVIDYFRVVMKQQYYLQYRP 323
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 26.2 bits (55), Expect = 8.9
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 310 LTATAKNHSNVKPSKDIKDRLKTIADMSYKKVANRFKVQGDDGIG-PFVLESSSTDDNTL 368
LT +A+N + + + T A ++ +AN K Q + I PF E+ ST
Sbjct: 866 LTGSARNTAEPVENTSAEPIENTSAPTPFE-IAN--KQQATEPISAPFATETISTPAPVK 922
Query: 369 PNNGNYKRNNSKRKGVAFEATTDLYSKF 396
P +R+ S + GV +AT + +F
Sbjct: 923 PPVPPSRRDRSAQDGVVQQATPHIQDEF 950
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 8.9
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 311 TATAKNHSNVKPSKDIKDRLKTIADMSYKKVANRFKVQGDDGIGPFVLESSSTDDNTLPN 370
T TA+ H K DI+ ++T S K + V GD G+G ++ + + +
Sbjct: 22 TLTARTHIT-KGQIDIELTMRTTKKSSKKGIPLNLMVVGDVGLGRTAFINTLCEKPLIRH 80
Query: 371 NGNY 374
N N+
Sbjct: 81 NNNF 84
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.134 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,227,830
Number of Sequences: 5004
Number of extensions: 107602
Number of successful extensions: 349
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 335
Number of HSP's gapped (non-prelim): 29
length of query: 431
length of database: 2,362,478
effective HSP length: 75
effective length of query: 356
effective length of database: 1,987,178
effective search space: 707435368
effective search space used: 707435368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 55 (26.2 bits)
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