Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000026-TA|BGIBMGA000026-PA|undefined
(431 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.005
SB_59383| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.19
SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3) 33 0.34
SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14) 33 0.59
SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55) 31 1.4
SB_39600| Best HMM Match : Sushi (HMM E-Value=0) 31 1.4
SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_53822| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.4
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 30 3.2
SB_11978| Best HMM Match : Myb_DNA-binding (HMM E-Value=8e-21) 30 3.2
SB_57228| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12) 29 5.5
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 29 7.3
SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24) 29 7.3
SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059) 29 9.6
SB_24132| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_20861| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07) 29 9.6
SB_17711| Best HMM Match : HECT (HMM E-Value=4.9) 29 9.6
SB_17425| Best HMM Match : Homeobox (HMM E-Value=7.2e-07) 29 9.6
SB_11048| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 29 9.6
SB_11047| Best HMM Match : Homeobox (HMM E-Value=5.3e-17) 29 9.6
SB_6972| Best HMM Match : Homeobox (HMM E-Value=7.2e-07) 29 9.6
SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_49340| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 29 9.6
SB_39468| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.6
SB_18861| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 29 9.6
SB_17558| Best HMM Match : Homeobox (HMM E-Value=2.9e-21) 29 9.6
SB_15284| Best HMM Match : Homeobox (HMM E-Value=5.3e-17) 29 9.6
SB_9147| Best HMM Match : Sushi (HMM E-Value=0) 29 9.6
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 39.5 bits (88), Expect = 0.005
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 199 QSHKTIHDYERDKLQKIYRQNNN-NINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTKPLR 257
+SHK Y DK K + Q+ +I+ HKE + +D F ++N+ KP
Sbjct: 920 RSHKDFKPYRCDKCDKSFNQSRLLSIHSLTHKEKKTVPKPSRSSVDDPFSVVNEDPKPYV 979
Query: 258 INQPNKLSRPGSAYRNTELKTKIFPNSPTKYFNKDSK 294
N+P + + + N L +++ N + K K
Sbjct: 980 CNEP-ECWKTFKTHTNLNLHSRVHANEKPYHCKKCDK 1015
>SB_59383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 34.3 bits (75), Expect = 0.19
Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 10/149 (6%)
Query: 168 TVYPPSHISNIERPYKHRDW--NQYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINL 225
TV+ P I+RP K DW + + H+ + D YR+ N+++L
Sbjct: 312 TVHAPIKEHRIKRPLK-LDWFNAEISAAIKARNCLHRIATSLKTDTSWSEYRRARNHVHL 370
Query: 226 YAHKEPNRIRNKVVYKYEDE---FKLLNQSTKPLRINQPNKLSRPGSAYRNTELKTKIFP 282
+ + + E+ +K++ + + +N PN+L+ + Y +T
Sbjct: 371 IRKAKKTFYNDAIKNNLENPKNLWKIIRKISPSKHVNLPNRLTVNDTLYEDTF----DIA 426
Query: 283 NSPTKYFNKDSKDGYFHVPVEFDNWQALT 311
NS K+F+ S EF +W LT
Sbjct: 427 NSFNKHFSNISSQVSIDAVPEFPDWSVLT 455
>SB_57911| Best HMM Match : Drf_FH1 (HMM E-Value=2.3)
Length = 169
Score = 33.5 bits (73), Expect = 0.34
Identities = 22/66 (33%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 136 SKPQPTIQYKPIHHFRPARPYHHFAASNIRPSTVY--PPSHISNIERPYKHRDWNQYNQV 193
S+P+P +P RP PY S RP Y PPS S PY R ++
Sbjct: 34 SRPRPPYDDRPPSESRPRPPYDERPPSESRPRPPYERPPSE-SRPRPPYDDRRTSETRPR 92
Query: 194 PPNPEQ 199
PP E+
Sbjct: 93 PPYDER 98
Score = 29.5 bits (63), Expect = 5.5
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 6/94 (6%)
Query: 136 SKPQPTIQYKPIHHFRPARPYHHFAASNIRPSTVYPPSHIS--NIERPYKHRDWNQYNQV 193
S+P+P + +P RP PY S RP Y +S + PY R ++
Sbjct: 62 SRPRPPYE-RPPSESRPRPPYDDRRTSETRPRPPYDERRVSENRPKPPYDDRRTSETRPR 120
Query: 194 PPNPEQ--SHKTIHDYE-RDKLQKIYRQNNNNIN 224
PP ++ SH Y D+ + R N N N
Sbjct: 121 PPYDDRDLSHGPPPRYSVTDRYPEHDRPRNPNAN 154
>SB_19503| Best HMM Match : Kinesin (HMM E-Value=9.5e-14)
Length = 869
Score = 32.7 bits (71), Expect = 0.59
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 178 IERPYKHRDWNQYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINLYAHKEPNRI 234
+ERP K +Q +Q PN + S+ H E KL+++ +Q +N I++ R+
Sbjct: 248 LERPTKSSTPSQRSQSQPNEDSSYLG-HQTETSKLKELIKQRDNEISILCKAMEERL 303
>SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55)
Length = 607
Score = 31.5 bits (68), Expect = 1.4
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 9/134 (6%)
Query: 220 NNNINLYAHKEPNRIRNKVVYKYEDE--FKLLNQSTK----PLRINQPNKLSRPGSAYRN 273
NN N +K N++ NK YK ++ +K+ N+ TK + N NK++ +
Sbjct: 319 NNVTNKKTNKMTNKVTNKATYKVTNKVTYKVANKVTKKVTNKVTYNVTNKVTNEVTNKMT 378
Query: 274 TELKTKIFPNSPTKYFNKDSKDGYFHVPVEFDNWQALTATAKNHSNVKPSKDIKDRLKT- 332
++ K+ K NK +K + V + N A T K + V K K
Sbjct: 379 NKVTNKMTNKVTNKVTNKVTKMVTYKVANKVTNKVANKVTNKVTNKVTKMVTYKVANKVT 438
Query: 333 --IADMSYKKVANR 344
+A+ KVAN+
Sbjct: 439 NKVANKVTNKVANK 452
Score = 31.5 bits (68), Expect = 1.4
Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 216 YRQNNNNINLYAHKEPNRIRNKVVYKYEDEF------KLLNQSTKPLRINQPNKLSRPGS 269
Y+ N N A+K N++ NKV YK ++ K+ N+ T + NKL+ +
Sbjct: 431 YKVANKVTNKVANKVTNKVANKVTYKVANKVTNKVTNKVANKVTNKVTNKVANKLTNNVT 490
Query: 270 AYRNTELKTKIFPNSPTKYFNKDSKDGYFHVPVEFDNWQALTATAKNHSNVKPSKDIKDR 329
+ ++ K+ + K NK + V + N T K +N +K
Sbjct: 491 NKKTNKMTNKVTNKATYKVTNKVTYKVANKVTNKVTNKVTYNVTNK-VTNEVTNKMTNKV 549
Query: 330 LKTIADMSYKKVANR 344
+ +M KVAN+
Sbjct: 550 TNKVTNMVTYKVANK 564
>SB_39600| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1368
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 207 YERDKLQKIYRQNNNNINLYAHK-EPNRIRNKV-VYKYEDEFKLLNQSTKPLRI 258
Y +DK K++R N N + H+ +P I KV +Y+++ E K + ST LR+
Sbjct: 1142 YRQDKAIKVFRGNENRNTVVKHELKPTIIAQKVRIYRHQ-ELKEFSGSTVCLRV 1194
>SB_346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 31.1 bits (67), Expect = 1.8
Identities = 16/82 (19%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 171 PPSHISNIERPYKHRDWNQYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINLYAHKE 230
PP H+ + H + + ++ + S K + D ++D ++I Q + + E
Sbjct: 284 PPPHLDEEKIKQLHEELKE--EIKSMAKDSEKDLEDAKKDLKEEI-EQIKEEVGYLRYME 340
Query: 231 PNRIRNKVVYKYEDEFKLLNQS 252
++ NK Y++ +K+L ++
Sbjct: 341 AKQLLNKTKPNYKEAYKILEEA 362
>SB_53822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 30.7 bits (66), Expect = 2.4
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 165 RPSTVYPPSHISNIERPYKHRDWNQYNQVPPNPEQSHKTIHDYERDK 211
RPS +YP + + P+ H + + +PP + +I+ YER K
Sbjct: 27 RPSVLYPSINFESFHIPFDHEEVK--DLIPPTAKHVFLSINRYERKK 71
>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
Length = 242
Score = 30.3 bits (65), Expect = 3.2
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 154 RPYHHFAASNIRPSTVYPPSHISNIE-RPYKHRDWNQYNQVPPNPEQ 199
RP+ A S + P+T PPSH I RP++ + ++ + P P +
Sbjct: 21 RPHRPIAPSPLGPTTPSPPSHHGPISLRPHRPTIPSPHDPITPRPHR 67
>SB_11978| Best HMM Match : Myb_DNA-binding (HMM E-Value=8e-21)
Length = 636
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 358 LESSSTDDNTLPNNGNYKRNNSKRKGVAFEATTDLYSKFYGLD-EEAEKKYGSSGISY-T 415
++SS D N N G+ K N K +G A E T D G+D +++++Y G+ +
Sbjct: 189 IKSSELDLNRPRNRGSNKVENGKNEGTAME-TKDKVEHVPGVDPNDSDEEYHEPGMRVGS 247
Query: 416 EYE 418
EY+
Sbjct: 248 EYQ 250
>SB_57228| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 286 TKYFNKDSKDGYFHVPVEFDNWQALTATAKNHSNVKPSKDIKDRLKTIADMSYKKVANRF 345
TK + K + GY ++ FD+ Q H+ P +DI + KK+ N F
Sbjct: 152 TKQYQKHKQSGYCYLIKCFDD-QIFPPKLVRHTAESPDEDIPQMFVENLESDIKKIYNTF 210
Query: 346 K 346
K
Sbjct: 211 K 211
>SB_24471| Best HMM Match : Lectin_C (HMM E-Value=2.7e-12)
Length = 695
Score = 29.5 bits (63), Expect = 5.5
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 133 YFFSKPQPTIQYKPIHHFRPARPYHHFAASNIRPSTVYPPSHISNIERPYKHRDWNQYNQ 192
Y + P P+ P H++ P+ P S R S+ PPS S+ + KHR ++ Q
Sbjct: 526 YPYPYPYPSPYPYPAHYYPPSLP------SYTRSSSYPPPSIDSSEYQNQKHRKRPRHRQ 579
Query: 193 VPPNPEQSHKTIHDYERDKLQKIYRQ 218
+P Q + + +Y++ + Q +Y Q
Sbjct: 580 RDRHPPQP-QYLQEYQQ-QAQGMYPQ 603
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/53 (20%), Positives = 31/53 (58%)
Query: 208 ERDKLQKIYRQNNNNINLYAHKEPNRIRNKVVYKYEDEFKLLNQSTKPLRINQ 260
E+ ++++I ++ + + L +E +R+R K++ + + K+L Q K ++ +
Sbjct: 942 EQMRIEEIEQEKSKQLQLQQKEEEDRLRKKIMKEQRELEKMLQQKEKERQVER 994
>SB_41947| Best HMM Match : SH3_1 (HMM E-Value=6.3e-24)
Length = 581
Score = 29.1 bits (62), Expect = 7.3
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 187 WNQYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINLYAHKEPNRIRNKVVYKYE 243
W + Q P PE H+ D + L + NN + Y+ + R+ N + K E
Sbjct: 477 WPDWCQYPEQPECFHEAPVDVPSESLSPKLNEKNNGVKSYSGPQFPRLPNFTLTKDE 533
>SB_58702| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.059)
Length = 765
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 7/69 (10%)
Query: 138 PQPTIQYKPIH----HFRPARPYHHFAASNIRPSTVYPPSHISNIERPYKHRDWNQYNQV 193
PQPT+Q P H H P + P +Y P + P+ H Q+ +
Sbjct: 451 PQPTMQTTPTHSSTSHTPPTPISAPYPVEGYPPPLIYAPMSGACCTNPHCH---GQHQAM 507
Query: 194 PPNPEQSHK 202
NP SH+
Sbjct: 508 YANPPPSHR 516
>SB_24132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/85 (20%), Positives = 35/85 (41%)
Query: 239 VYKYEDEFKLLNQSTKPLRINQPNKLSRPGSAYRNTELKTKIFPNSPTKYFNKDSKDGYF 298
V K +D + L ++ I PG ++ ++E K K+ + K + K+
Sbjct: 100 VVKVKDALEYLENQSRRNNIRVSGIPESPGESWADSEAKVKLKKKAKGKSLTQSEKERPR 159
Query: 299 HVPVEFDNWQALTATAKNHSNVKPS 323
+ + +W+A A + KP+
Sbjct: 160 TIVCKLKDWKAKEAVVRKARIDKPA 184
>SB_20861| Best HMM Match : RVT_1 (HMM E-Value=1.7e-07)
Length = 370
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINLYAHKEPN 232
S+I NI + + D Y PE I ++D+ + ++N +++ + N
Sbjct: 298 SNIVNIRKLLEEADKKIYRTRLDQPEYPLSKILPKKKDQKYNLRKRNVIYPRVHSERFKN 357
Query: 233 RIRNKVVYKYED 244
N++V+KY D
Sbjct: 358 TFVNRLVFKYSD 369
>SB_17711| Best HMM Match : HECT (HMM E-Value=4.9)
Length = 310
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/72 (23%), Positives = 33/72 (45%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINLYAHKEPN 232
S+I NI + + D Y PE I ++D+ + ++N +++ + N
Sbjct: 238 SNIVNIRKLLEEADKKIYRTRLDQPEYPLSKILPKKKDQKYNLRKRNVIYPRVHSERFKN 297
Query: 233 RIRNKVVYKYED 244
N++V+KY D
Sbjct: 298 TFVNRLVFKYSD 309
>SB_17425| Best HMM Match : Homeobox (HMM E-Value=7.2e-07)
Length = 387
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHK 202
S++S ++R + D N Y+ VP NP +SH+
Sbjct: 2 SYVS-MKRTNPYSDENDYHSVPSNPRKSHR 30
>SB_11048| Best HMM Match : Homeobox (HMM E-Value=2.9e-21)
Length = 193
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHK 202
S++S ++R + D N Y+ VP NP +SH+
Sbjct: 2 SYVS-MKRTNPYSDENDYHSVPSNPRKSHR 30
>SB_11047| Best HMM Match : Homeobox (HMM E-Value=5.3e-17)
Length = 193
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHK 202
S++S ++R + D N Y+ VP NP +SH+
Sbjct: 2 SYVS-MKRTNPYSDENDYHSVPSNPRKSHR 30
>SB_6972| Best HMM Match : Homeobox (HMM E-Value=7.2e-07)
Length = 74
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHK 202
S++S ++R + D N Y+ VP NP +SH+
Sbjct: 2 SYVS-MKRTNPYSDENDYHSVPSNPRKSHR 30
>SB_4442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 9.6
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 6/90 (6%)
Query: 296 GYFHVPVEFDNWQALTATAKNHSNVKPSKDIKDRLKTI----ADMSYKKVANRFKVQGDD 351
G+ H+ E A T K KP KD+K + + + A+M + + V
Sbjct: 101 GWNHLECEPPANDATVTTTKTRPAAKPMKDVKPKKEAVKEEAAEMKSLTFSGKAPVDSFC 160
Query: 352 GIGPFVL--ESSSTDDNTLPNNGNYKRNNS 379
I VL ++ ++ +N N N+ NN+
Sbjct: 161 SIKDKVLVQQNINSSNNNNDQNNNHNNNNN 190
>SB_49340| Best HMM Match : Homeobox (HMM E-Value=2.9e-21)
Length = 193
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHK 202
S++S ++R + D N Y+ VP NP +SH+
Sbjct: 2 SYVS-MKRTNPYSDENDYHSVPSNPRKSHR 30
>SB_39468| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1778
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 168 TVYPPSHISNIERPYKHRDWNQYNQVPPNPEQSHKTIHDYERDKLQKIYRQNNNNINL-Y 226
T YP S ++ + N PPNP QS++ ++ Q N +N +
Sbjct: 178 TRYPVQDTSQSNTAQVYQQFQGNNVSPPNPNQSYQDNSQLDQAASQPFQDANQSNRDTNQ 237
Query: 227 AHKEPNRIRNKVVYKYED 244
+++E N+ Y++
Sbjct: 238 SYQEDNQSNQNASQSYQE 255
>SB_18861| Best HMM Match : Homeobox (HMM E-Value=2.9e-21)
Length = 193
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHK 202
S++S ++R + D N Y+ VP NP +SH+
Sbjct: 2 SYVS-MKRTNPYSDENDYHSVPSNPRKSHR 30
>SB_17558| Best HMM Match : Homeobox (HMM E-Value=2.9e-21)
Length = 193
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHK 202
S++S ++R + D N Y+ VP NP +SH+
Sbjct: 2 SYVS-MKRTNPYSDENDYHSVPSNPRKSHR 30
>SB_15284| Best HMM Match : Homeobox (HMM E-Value=5.3e-17)
Length = 159
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 173 SHISNIERPYKHRDWNQYNQVPPNPEQSHK 202
S++S ++R + D N Y+ VP NP +SH+
Sbjct: 2 SYVS-MKRTNPYSDENDYHSVPSNPRKSHR 30
>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1656
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 207 YERDKLQKIYRQNNNNINLYAHK-EPNRIRNKV-VYKYEDEFKLLNQSTKPLR 257
Y +DK K++R N N + H+ +P I KV +Y+++ E K ST LR
Sbjct: 1455 YRQDKAIKVFRGNENRNTVVRHELKPTIIAQKVRIYRHQ-EIKEFIGSTVCLR 1506
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.315 0.134 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,635,915
Number of Sequences: 59808
Number of extensions: 735054
Number of successful extensions: 2184
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2160
Number of HSP's gapped (non-prelim): 44
length of query: 431
length of database: 16,821,457
effective HSP length: 84
effective length of query: 347
effective length of database: 11,797,585
effective search space: 4093761995
effective search space used: 4093761995
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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