BLASTP 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BGIBMGA000025-TA|BGIBMGA000025-PA|undefined (479 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305,962... 37 0.031 07_01_0376 + 2815419-2815755,2815912-2817659 36 0.094 08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391 35 0.12 08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 34 0.22 05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931 34 0.29 05_04_0111 - 18079051-18079970,18080384-18080462 34 0.29 06_01_0223 - 1709897-1709912,1710188-1712520 33 0.38 05_04_0089 - 17821196-17821306,17821611-17821688,17821801-178218... 33 0.38 12_02_0772 - 23029703-23029715,23029835-23030463,23030637-230316... 32 0.87 07_01_0828 - 6679393-6680432,6680448-6680784 31 1.5 01_07_0167 - 41613834-41613842,41614060-41615056,41615456-416163... 31 1.5 08_02_1027 + 23749400-23750698 31 2.0 01_06_0394 - 28977800-28978135,28978222-28978494,28978603-289790... 31 2.0 01_06_1320 + 36272716-36273339,36274222-36275762,36276349-362764... 31 2.7 05_07_0328 + 29286109-29286120,29286982-29287146,29288427-292885... 30 4.7 05_01_0146 - 953957-956278,956468-956786,957185-957213 29 6.2 04_03_0598 - 17826167-17826213,17826691-17826837,17827793-17828744 29 6.2 03_02_0112 + 5689439-5689474,5689629-5689778,5690194-5690361,569... 29 6.2 07_03_1329 + 25844335-25845000 29 8.1 04_03_0963 + 21285160-21285579,21286585-21286635,21287017-212875... 29 8.1 04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738 29 8.1 >04_03_0024 - 9623178-9624001,9624502-9624678,9625144-9625305, 9625520-9626032,9626801-9629153 Length = 1342 Score = 37.1 bits (82), Expect = 0.031 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 9/128 (7%) Query: 3 LKKQTSRWTGYRKAQWP-IENHTLILMYILLFAARFNC-QDLSI----NEETKNNTVDIN 56 LK+ + K +WP I N L L + +D+++ N+ETK + Sbjct: 327 LKEINEEYNNSMKCEWPKIRNKELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRK 386 Query: 57 KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115 + D H E N+ ++S++ + + LE+ E+ L+N+ M +EN IDN Y + Sbjct: 387 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIENEIDNAEQYND 444 Query: 116 RIKIIDGV 123 I +D V Sbjct: 445 FINTLDEV 452 >07_01_0376 + 2815419-2815755,2815912-2817659 Length = 694 Score = 35.5 bits (78), Expect = 0.094 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%) Query: 3 LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56 LK+ + K +WP + Y L + +D+++ N+ETK + Sbjct: 275 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRK 334 Query: 57 KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115 + D H E N+ ++S++ + + LE+ E+ L+N+ M +EN IDN Y + Sbjct: 335 EQDKHGKEEQNLGKILSEEEQWAKNERL-FLESYEEEINLINE-MENIENEIDNAEQYND 392 Query: 116 RIKIIDGV 123 I +D V Sbjct: 393 FINTLDEV 400 >08_02_0004 + 11187587-11187923,11187939-11189861,11190195-11190391 Length = 818 Score = 35.1 bits (77), Expect = 0.12 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%) Query: 3 LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56 LK+ + K +WP + Y L + +D+++ N+ETK + Sbjct: 322 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVKIFKNQETKIEQIKRK 381 Query: 57 KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115 + D H E N+ ++S++ + + LE+ E+ L+N+ M +EN IDN Y + Sbjct: 382 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIENEIDNTEQYND 439 Query: 116 RIKIIDGV 123 I +D V Sbjct: 440 FINTLDEV 447 >08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 Length = 642 Score = 34.3 bits (75), Expect = 0.22 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%) Query: 3 LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56 LK+ + K +WP + Y L + +D+++ N+ETK + Sbjct: 148 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRK 207 Query: 57 KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115 + D H E N+ ++S++ + + LE+ E+ L+N+ M +EN IDN Y + Sbjct: 208 EQDKHGKEEQNLCKILSEEEQWAKNERL-FLESYEEEINLINE-MENIENEIDNAEQYND 265 Query: 116 RIKIIDGV 123 I +D V Sbjct: 266 FINTLDEV 273 >05_04_0185 - 18857229-18857638,18858347-18858424,18858758-18859931 Length = 553 Score = 33.9 bits (74), Expect = 0.29 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%) Query: 45 NEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYV 104 N+ETK + + D H E N+ ++S++ + + LE+ E+ L+N+ M + Sbjct: 8 NQETKIEQIKRKEQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENI 65 Query: 105 ENLIDNVLNY-ERIKIIDGV 123 EN IDN Y + I +D V Sbjct: 66 ENEIDNAEQYNDFINTLDEV 85 >05_04_0111 - 18079051-18079970,18080384-18080462 Length = 332 Score = 33.9 bits (74), Expect = 0.29 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%) Query: 3 LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56 LK+ + K +WP + Y L + +D+++ N+ETK + Sbjct: 189 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQETKIEQIKRI 248 Query: 57 KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115 + D H E N+ ++S++ + + LE+ E+ L+N+ M +EN IDN Y + Sbjct: 249 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIENEIDNAEQYND 306 Query: 116 RIKIIDGV 123 I +D V Sbjct: 307 FINTLDEV 314 >06_01_0223 - 1709897-1709912,1710188-1712520 Length = 782 Score = 33.5 bits (73), Expect = 0.38 Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Query: 45 NEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYV 104 N+ETK + + D H E N+ ++S++ + + LE+ E+ L+N+ M + Sbjct: 375 NQETKIEQIKRKEQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENI 432 Query: 105 ENLIDNVLNY 114 EN IDN Y Sbjct: 433 ENEIDNAEQY 442 >05_04_0089 - 17821196-17821306,17821611-17821688,17821801-17821863, 17822167-17823021,17823121-17823236,17823930-17824004, 17826156-17826213 Length = 451 Score = 33.5 bits (73), Expect = 0.38 Identities = 24/93 (25%), Positives = 51/93 (54%), Gaps = 9/93 (9%) Query: 52 TVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLN-KTMGY----VEN 106 T++++ S+ +N+ VS + P TL++ S E ++ L+N + + Y V+N Sbjct: 319 TLNVSLESHFSSTETNV---VSSECPETLENTSPSKEFAILRDTLVNAENLHYVTDDVQN 375 Query: 107 LIDNVLNYE-RIKIIDGVEIKIKNDTKVVDKER 138 L+ + N E +++ + V +K++ DT+ +ER Sbjct: 376 LMTKLSNLEAKLEEAESVIVKLREDTRTTIRER 408 >12_02_0772 - 23029703-23029715,23029835-23030463,23030637-23031673, 23031830-23032166 Length = 671 Score = 32.3 bits (70), Expect = 0.87 Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 9/128 (7%) Query: 3 LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56 LK+ + K +WP + Y L + +D+++ N++TK + Sbjct: 275 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNQQTKIEQIKRK 334 Query: 57 KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115 + D H E N+ ++S++ + + LE+ E+ L+N+ M ++N IDN Y + Sbjct: 335 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIKNEIDNAEQYND 392 Query: 116 RIKIIDGV 123 I +D V Sbjct: 393 FINTLDEV 400 >07_01_0828 - 6679393-6680432,6680448-6680784 Length = 458 Score = 31.5 bits (68), Expect = 1.5 Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 9/128 (7%) Query: 3 LKKQTSRWTGYRKAQWPIENHTLILMYILLFAARF--NCQDLSI----NEETKNNTVDIN 56 LK+ + K +WP + Y L + +D+++ N ETK + Sbjct: 322 LKEINEEYNNSMKCEWPKIRDKELYFYRELARVKKVKKNEDMAVEIFKNHETKIEQIKRI 381 Query: 57 KSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNY-E 115 + D H E N+ ++S++ + + LE+ E+ L+N+ M ++N IDN Y + Sbjct: 382 EQDKHGKEEQNLGKILSEEEQWAENERL-FLESYEEEINLINE-MENIKNEIDNAEQYND 439 Query: 116 RIKIIDGV 123 I +D V Sbjct: 440 FINTLDEV 447 >01_07_0167 - 41613834-41613842,41614060-41615056,41615456-41616336, 41616437-41616508,41616590-41616649,41616736-41616885, 41616974-41617021,41617107-41617181,41617266-41617411, 41617514-41617594,41617703-41617810,41618046-41618057, 41618137-41618148,41618499-41618546,41619021-41619105 Length = 927 Score = 31.5 bits (68), Expect = 1.5 Identities = 31/130 (23%), Positives = 60/130 (46%), Gaps = 10/130 (7%) Query: 35 ARFNCQDLSINEETKNNT-VDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEK 93 + F +D ++ T+N+ V++N D + E ++ N+L D +T+ + ++V ++ Sbjct: 270 SHFTTKDNEVDMATENDDYVELNSDDENEQEGTS-NMLQQDSQINTITAIEQVEQHVGQE 328 Query: 94 EALLNKTMGYVENLIDNVLNYERI-KIIDGVEIKIKNDTKVVDKER-----KENNDIEEA 147 E E+ ++ +N E I + E N V+DK+ K+ EEA Sbjct: 329 ETTSETKATSAED--NDTINEEDINNYLANEEDSQDNTPVVIDKKHIPCIGKKFRTHEEA 386 Query: 148 RGLFSKYTYE 157 R F+ Y Y+ Sbjct: 387 RSFFNFYAYQ 396 >08_02_1027 + 23749400-23750698 Length = 432 Score = 31.1 bits (67), Expect = 2.0 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 2/82 (2%) Query: 64 ESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNYERIKI-IDG 122 E+S + +S+K +TLQ I+ E++ E+ ++G ++++ID + + E K + Sbjct: 324 ENSQLKEDISEKE-NTLQSIIQDYESLKVSESAAQSSIGELKDMIDAMFSSESTKTSAEA 382 Query: 123 VEIKIKNDTKVVDKERKENNDI 144 K + D ER + DI Sbjct: 383 SPRDTKGNEVYYDHERTQLEDI 404 >01_06_0394 - 28977800-28978135,28978222-28978494,28978603-28979013, 28979157-28979273 Length = 378 Score = 31.1 bits (67), Expect = 2.0 Identities = 48/224 (21%), Positives = 90/224 (40%), Gaps = 26/224 (11%) Query: 213 MFLPSILGSF-GKIL-GKGISHLSATSSQ---ASYPPANMDDTNAYNNDNKDFMGYETNP 267 +FL + GSF G++ K + + + SS + PP +D+TN N K F+ + P Sbjct: 143 VFLSGVPGSFYGRLFPSKNVHFVCSFSSLHWLSQVPPGLLDETNGPVNKGKMFISSTSPP 202 Query: 268 TGTYAYPQDYATE---------GNDMEPGNIDMSRYGAGGPKVTYLPSKNSYYKNQMSTA 318 AY + + + + G + +S G G + + + + +S + Sbjct: 203 AVAAAYSRQFRRDFSLFLRSRAAEVVAGGRMVVSMLGREGER--HADRNTTLLWDLLSES 260 Query: 319 NNYKIFQKIPASSMILSNYDPFYSPLLSRLDGIFARLGLAPSE--NAVTDSPQMGGQSLS 376 + Q + + + PFY+P + ++ R G E A S G + Sbjct: 261 FAALVSQGVVEQGKVDAYDAPFYAPSIGEIEEEVRRQGSFRMEVARAYEASLSGSGDARK 320 Query: 377 D-----MKLEACREQLICLMYAN---PAKYAPYSNLVSAQLSRE 412 D M + A +E ++ + A +A Y+ LV+A + RE Sbjct: 321 DGRTVSMAVRAIQESMLGHHFGTEIVDALFAKYTELVTATMERE 364 >01_06_1320 + 36272716-36273339,36274222-36275762,36276349-36276490, 36276622-36276729,36276814-36277026,36277113-36277223, 36278056-36278250,36278874-36279048,36279189-36279226 Length = 1048 Score = 30.7 bits (66), Expect = 2.7 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%) Query: 263 YETNPTGTYAYPQDYATEGNDMEPGNIDMSRYGAGGPKVTYLPSKNSYYKNQMSTANNYK 322 Y+ +PT + A P + +++ N YG GG ++ P S N M + N Sbjct: 449 YQKSPTSSNASPGGSPAQHQNIDNINSAFLNYGLGGYPLS--PGLPSMMMNCMGSGNMPP 506 Query: 323 IFQKIPASSMILS 335 +F+ A+S I S Sbjct: 507 LFESAAAASAIAS 519 >05_07_0328 + 29286109-29286120,29286982-29287146,29288427-29288589, 29288625-29288903,29289047-29289122,29289725-29289787, 29292116-29292164,29292413-29292504,29293017-29293068, 29293209-29293271,29293382-29293431,29293941-29294016, 29294444-29294656,29294763-29294869,29294966-29295074, 29295489-29295689,29295773-29296033,29296154-29296171, 29296287-29296397,29296755-29297030,29297108-29297382, 29297814-29298165,29298371-29298655,29298715-29299261, 29301658-29301781,29301871-29301946,29302062-29302136, 29302300-29302353,29302833-29302892,29302977-29303093, 29303228-29303361,29303480-29303682,29303879-29303976, 29304358-29304461,29304537-29304702,29304803-29304925, 29305047-29305129,29305217-29305358,29305523-29305549, 29305784-29305854,29305930-29306518 Length = 2046 Score = 29.9 bits (64), Expect = 4.7 Identities = 19/90 (21%), Positives = 46/90 (51%), Gaps = 5/90 (5%) Query: 79 TLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNYERIKIIDGVEIKIKNDTKVVDKER 138 +L D ++ L+ ++ E +L T G ++ L R+KI++ + + + ++ ++E Sbjct: 1578 SLGDLLKLLD-ISSAENVLPTTYGCLQP----PLGKHRLKIVEFISVLLTIGSETAEQEL 1632 Query: 139 KENNDIEEARGLFSKYTYEYRLYQKIKSFI 168 + ++ + LF +Y Y L+ ++S I Sbjct: 1633 INQSAVKRSIDLFFQYPYNNFLHHHVESII 1662 >05_01_0146 - 953957-956278,956468-956786,957185-957213 Length = 889 Score = 29.5 bits (63), Expect = 6.2 Identities = 18/61 (29%), Positives = 30/61 (49%) Query: 46 EETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVE 105 EE ++ DI + + S E + L DKA +LQD L+ E++ L + + Y E Sbjct: 580 EECESKETDIVRLNKQSEEEISALQLEVDKAVESLQDAEHQLQVANEEKEKLQERLVYTE 639 Query: 106 N 106 + Sbjct: 640 S 640 >04_03_0598 - 17826167-17826213,17826691-17826837,17827793-17828744 Length = 381 Score = 29.5 bits (63), Expect = 6.2 Identities = 14/40 (35%), Positives = 19/40 (47%) Query: 423 NPEILRFFKYMRAARRGQEGVDCVTLHPGCSTSTPTHTMI 462 NP IL A+R G C++ + C TS PT T + Sbjct: 306 NPYILDGCSPNNDAKRNSSGYACISTNSECITSKPTDTFV 345 >03_02_0112 + 5689439-5689474,5689629-5689778,5690194-5690361, 5691334-5691458,5691914-5692007,5692844-5692942, 5693730-5693910,5694051-5694166,5694758-5694913, 5695226-5695354,5695554-5695718 Length = 472 Score = 29.5 bits (63), Expect = 6.2 Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Query: 96 LLNKTMGYVENLIDNVLNYERIKIIDGVEIKIKNDTKVVDKERKE 140 LLN+T+G ++ + L ++ I DG+ +K N +VDK + + Sbjct: 287 LLNRTLGLLKKNCKSTLAFDSIAAADGISLK-DNVENLVDKAKDQ 330 >07_03_1329 + 25844335-25845000 Length = 221 Score = 29.1 bits (62), Expect = 8.1 Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Query: 79 TLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNYERIKIIDGVEIKIKNDTKVVDKER 138 TL+ + V E A L+KT+G N+ID+ E I + D +K + DK Sbjct: 102 TLESSDGEVVKVKEASARLSKTIG---NIIDDGRGDEAIPLPDVSYKTLKKVVEYCDKHA 158 Query: 139 KENNDIEEAR 148 E +D +E + Sbjct: 159 DEKSDTDEQK 168 >04_03_0963 + 21285160-21285579,21286585-21286635,21287017-21287502, 21287866-21287961 Length = 350 Score = 29.1 bits (62), Expect = 8.1 Identities = 14/49 (28%), Positives = 29/49 (59%), Gaps = 2/49 (4%) Query: 72 VSDKAPSTLQDFIRSL--ENVTEKEALLNKTMGYVENLIDNVLNYERIK 118 + K + ++ F SL +++T+K +++ + +GY++ L D V E IK Sbjct: 137 IPGKVANAIEKFYISLIYQDLTDKASIVGEAIGYIKTLEDVVQKLETIK 185 >04_03_0603 - 17898310-17899457,17899658-17899747,17900853-17901738 Length = 707 Score = 29.1 bits (62), Expect = 8.1 Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 10/170 (5%) Query: 241 SYPPANMDDTNAYNNDNKDFMGYETNPTGTYAYP-QDYATEGNDMEPGNIDMSRYGAGGP 299 SY P + D+N + + Y ++PT Y G + N SR G Sbjct: 111 SYTPFMLSDSNKFTVVGCQSLAYISDPTSNYTSGCASSCPGGKVVSATNRTCSRIGC--C 168 Query: 300 KVTYLPSKNSYYKNQM-STANNYKIFQKIPASSMILSNYDPF---YSPLLSRLDGIFARL 355 ++T +P + K + N I++ P S + +Y F S L S L+ Sbjct: 169 QIT-IPRGMEFCKVSFGESMNTSGIYEHTPCSYAAIMDYSNFTFSTSNLTSLLEFNNTYS 227 Query: 356 GLAPSE-NAVTDSPQMGGQSLSDMKLEACR-EQLICLMYANPAKYAPYSN 403 G AP + + P+ ++ ++ AC+ + +CL Y++ AK A N Sbjct: 228 GRAPVKFDWAIWGPRDCVEAQKNLTSYACKSDHSVCLNYSSGAKSAYMCN 277 Database: rice Posted date: Oct 3, 2007 3:31 PM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.317 0.133 0.385 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,504,272 Number of Sequences: 37544 Number of extensions: 563618 Number of successful extensions: 1378 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 1375 Number of HSP's gapped (non-prelim): 22 length of query: 479 length of database: 14,793,348 effective HSP length: 85 effective length of query: 394 effective length of database: 11,602,108 effective search space: 4571230552 effective search space used: 4571230552 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits) S2: 62 (29.1 bits)
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