Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000025-TA|BGIBMGA000025-PA|undefined
(479 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 33 0.34
AL032632-10|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical... 33 0.44
Z81077-11|CAB03068.2| 244|Caenorhabditis elegans Hypothetical p... 31 1.4
Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical pr... 30 3.1
AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical ... 30 3.1
AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical ... 30 4.1
U80953-5|AAO61446.3| 317|Caenorhabditis elegans Dachsund transc... 29 5.5
U80953-4|AAB52555.2| 420|Caenorhabditis elegans Dachsund transc... 29 5.5
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 29 7.2
Z81579-3|CAB04657.1| 323|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z67755-4|CAA91758.2| 966|Caenorhabditis elegans Hypothetical pr... 29 7.2
U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical pr... 29 7.2
U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical pr... 29 7.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 7.2
AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein. 29 7.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 9.5
U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical p... 29 9.5
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 33.5 bits (73), Expect = 0.34
Identities = 26/126 (20%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 40 QDLSINEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNK 99
Q+LS+ + +T+D+N +++ SDK + D R + + EALL +
Sbjct: 2473 QELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKIREKINDLRRRKQESDQAEALLQE 2532
Query: 100 TMGYVENLIDNVLNYERIKII-DGVEIKIKND----TKVVDKERKENNDIEEARGLFSKY 154
+ V ++ + ++ ++ I DG+ + D + +D RK+ +D + A+
Sbjct: 2533 -LSVVSDMPASTIDINMLQSIEDGLSTLLSEDRSKIQQAIDSLRKKKSDSDLAQHALEAL 2591
Query: 155 TYEYRL 160
+ + +L
Sbjct: 2592 SVQSKL 2597
Score = 31.5 bits (68), Expect = 1.4
Identities = 24/110 (21%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 40 QDLSINEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNK 99
Q+LS+ + +T+D+N +++ SD+ L + R + + EALL +
Sbjct: 2299 QELSVISDMPISTLDLNMLQGIEDNLNSLPAEESDEIREKLNELRRRKQESDQAEALLQE 2358
Query: 100 TMGYVENLIDNVLNYERIKIIDGVEIKIKN-DTKVVDKERKENNDIEEAR 148
+ + ++ + L+ + ++ GVE + + T+ DK R++ ND+ +
Sbjct: 2359 -LSVISDMPISTLD---LNMLQGVEDNLNSLPTEEADKIREKINDLRRRK 2404
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 40 QDLSINEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEALLNK 99
Q+LS+ + +T+D+N +++ SDK + D R + EALL +
Sbjct: 2415 QELSVIYDMPTSTIDLNMLQGIEDNLNSLPAEESDKIREKINDLRRRKQESDLAEALLQE 2474
Query: 100 TMGYVENLIDNVLNYERIKIIDGVEIKIKN-DTKVVDKERKENNDIEEAR 148
+ + ++ + ++ + ++ G+E + + + DK R++ ND+ +
Sbjct: 2475 -LSVIYDMPTSTID---LNMLQGIEDNLNSLPAEESDKIREKINDLRRRK 2520
>AL032632-10|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 33.1 bits (72), Expect = 0.44
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 79 TLQDFIRSLENVTEKEALLNKTMGYVENLIDNVLNYERIKIIDGVEIKIKNDTKVVDKER 138
T+ +LE+ + A N T+G ++ LI LN E+I D + + +N T+ +++E+
Sbjct: 1001 TIAKLETALEDEKARFARQNNTIGDMQKLISE-LN-EKIARFDNIALNERNSTRKIEREK 1058
Query: 139 -KENNDIEEARGLFSK 153
K N ++ A+ + K
Sbjct: 1059 EKLNEELTTAKEIIQK 1074
>Z81077-11|CAB03068.2| 244|Caenorhabditis elegans Hypothetical
protein F36A2.11 protein.
Length = 244
Score = 31.5 bits (68), Expect = 1.4
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 67 NINVLVSDKAPSTLQDFIRSLENVTEKEALLNKTMGYVENL 107
N+N ++D+ T QDF+ L++ E + + K GY+EN+
Sbjct: 35 NVNKKITDETEMT-QDFMNDLKHYQEFDETVTKCAGYLENV 74
>Z81515-4|CAB04196.1| 739|Caenorhabditis elegans Hypothetical
protein F26H11.4 protein.
Length = 739
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 218 ILGSFGKILGKGISHLSATSSQASYPPANMDDTNAYNNDNKDFMGYE 264
I+ S G +L I S SS + PP D T +NN + ++
Sbjct: 553 IMHSLGCLLDTAIVKFSQQSSSSQPPPMRRDSTAVFNNSYNQYTSFQ 599
>AL032631-7|CAB63337.2| 855|Caenorhabditis elegans Hypothetical
protein Y106G6H.5 protein.
Length = 855
Score = 30.3 bits (65), Expect = 3.1
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 299 PKVTYLPSKNSYYKNQMSTANNYK---IFQKIPASSMILSNYDPFYSPLLSRLDGIFARL 355
P+V L N Y+ +Q TA N + I+ ++ + + + PL R
Sbjct: 421 PEVAALTYSNLYHSHQCHTARNLRMAPIYHQLRDAGAVFGEIMGYERPLWFEKTPKTERN 480
Query: 356 GLAPSENAVTDSPQMGGQSLSDMKLEACREQLICLMYANPAKY 398
L ++A+ P+ + S+ EACRE++ + ++ +KY
Sbjct: 481 ALMSGQDALIGKPEWFERVASE--YEACRERVGLMDMSSFSKY 521
>AF003130-1|AAB54124.2| 423|Caenorhabditis elegans Hypothetical
protein F55A12.6 protein.
Length = 423
Score = 29.9 bits (64), Expect = 4.1
Identities = 38/123 (30%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 251 NAYNND--NKDFMGYETNPTGTYAYPQDYATEGNDMEPGNIDMSRYGAG------GPKVT 302
N Y N N + Y G Y Q Y GN+ GN Y G V
Sbjct: 146 NGYGNGYGNGYYNQYNGGYGGNGYYNQYY--NGNNYYGGNRGYYNYNQGQSYCRVAQFVD 203
Query: 303 YLPSKNSYYKNQMSTANNYKIFQKIPASSMILSNYDPF-YSPLLSRLDGIFARLGLAPSE 361
Y+ S YY + A NY+ Q P S+ LS F + P LSR + F +L L +E
Sbjct: 204 YVGSTPRYYCDCPPYAPNYQWNQCSPMSARALSPMSVFSHKPKLSR-NSFFFQLNLMLNE 262
Query: 362 NAV 364
V
Sbjct: 263 AVV 265
>U80953-5|AAO61446.3| 317|Caenorhabditis elegans Dachsund
transcription factor homologprotein 1, isoform b
protein.
Length = 317
Score = 29.5 bits (63), Expect = 5.5
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 42 LSINEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLE-------NVTEKE 94
L++++ N+ D + + E S+ N VSD+ S S+E ++
Sbjct: 160 LNLSKSGGNSENDSDSLENMRKEDSSPNTSVSDRGGSNSNSLSMSMEAGSSSSSGKNDEA 219
Query: 95 ALLNKTMGYVENLIDNVLNYERIKI-IDGVEIKIKNDT--KVVDKERKENNDIEEARGLF 151
+++NK M +E L +ER ++ + EI++ ++ K+V +ER +E
Sbjct: 220 SMMNKVMSLIE-LASQQFKHEREELWKERSEIQVLRESFHKIVQEERDLRKKLETQNKKC 278
Query: 152 SKYTYEYRLYQK 163
+ + Y+ +K
Sbjct: 279 TAFEKRYKYVKK 290
>U80953-4|AAB52555.2| 420|Caenorhabditis elegans Dachsund
transcription factor homologprotein 1, isoform a
protein.
Length = 420
Score = 29.5 bits (63), Expect = 5.5
Identities = 28/132 (21%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 42 LSINEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLE-------NVTEKE 94
L++++ N+ D + + E S+ N VSD+ S S+E ++
Sbjct: 263 LNLSKSGGNSENDSDSLENMRKEDSSPNTSVSDRGGSNSNSLSMSMEAGSSSSSGKNDEA 322
Query: 95 ALLNKTMGYVENLIDNVLNYERIKI-IDGVEIKIKNDT--KVVDKERKENNDIEEARGLF 151
+++NK M +E L +ER ++ + EI++ ++ K+V +ER +E
Sbjct: 323 SMMNKVMSLIE-LASQQFKHEREELWKERSEIQVLRESFHKIVQEERDLRKKLETQNKKC 381
Query: 152 SKYTYEYRLYQK 163
+ + Y+ +K
Sbjct: 382 TAFEKRYKYVKK 393
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 80 LQDFIRSLENVTEKEALLNKTMG-YVENLIDNVLNYERIK-IIDGVEIKIKNDTKVVDKE 137
+ + +L+ K A L KT V +L D ++ ER + +E K K K++D+
Sbjct: 1406 INELQEALDAANSKNASLEKTKSRLVGDLDDAQVDVERANGVASALEKKQKGFDKIIDEW 1465
Query: 138 RKENNDI 144
RK+ +D+
Sbjct: 1466 RKKTDDL 1472
>Z81579-3|CAB04657.1| 323|Caenorhabditis elegans Hypothetical
protein R13H4.5 protein.
Length = 323
Score = 29.1 bits (62), Expect = 7.2
Identities = 16/35 (45%), Positives = 24/35 (68%), Gaps = 4/35 (11%)
Query: 105 ENLIDNVLNYERIKIIDGVEIKIKNDTKVVDKERK 139
+N++DN+ +ER+K + + KIKN VVDK RK
Sbjct: 53 DNILDNLSPFERVK-MRRINHKIKN---VVDKRRK 83
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 80 LQDFIRSLENVTEKEALLNKTMG-YVENLIDNVLNYERIK-IIDGVEIKIKNDTKVVDKE 137
+ + +L+ K A L KT V +L D ++ ER + +E K K K++D+
Sbjct: 1406 INELQEALDAANSKNASLEKTKSRLVGDLDDAQVDVERANGVASALEKKQKGFDKIIDEW 1465
Query: 138 RKENNDI 144
RK+ +D+
Sbjct: 1466 RKKTDDL 1472
>Z81037-4|CAB02747.2| 391|Caenorhabditis elegans Hypothetical
protein C17E4.6 protein.
Length = 391
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 375 LSDMKLEACREQLICLMYANPAKY------APYSNLVSAQLSRE-LNELRRPVSDNPEIL 427
+ K E RE+ +C + PA+Y PYS + ++ R+ ++ R + N E+
Sbjct: 278 IKTFKCERPRERNLCAVTGRPARYLDPVTRLPYSTAYAFKVIRDRYHKHLRSIRGNDEVT 337
Query: 428 RFFKYMRAARRGQEGVDCVTLHPGCSTSTP 457
+ K ++A Q L G TS P
Sbjct: 338 TYLKSLKALPSPQISPRVPLLTTGPITSGP 367
>Z74032-2|CAA98466.2| 248|Caenorhabditis elegans Hypothetical
protein F35B12.3 protein.
Length = 248
Score = 29.1 bits (62), Expect = 7.2
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 258 KDFMGYETNPTGTYAYPQDYATEGNDMEPGNIDMSRY--GAGGPKVTYLPSKNSYYKNQM 315
+ + GY++N +YP+ Y + M +D++ Y G P+ PS SY
Sbjct: 85 RGYQGYQSNQRSQGSYPERY---DSSMYSPVMDLTNYYGSQGTPQYYGYPSSASYQMTPY 141
Query: 316 STANNYKIFQKIPASSMILSNYDPFY 341
N Q+ ++ S++ P Y
Sbjct: 142 YQNQNQGYMQQQQYNTPSQSSWSPMY 167
>Z67755-4|CAA91758.2| 966|Caenorhabditis elegans Hypothetical
protein F54F7.5 protein.
Length = 966
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 38 NCQDLSINEETKNNT-VDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEAL 96
N + +S+ + NNT + K C+S E +++N+ Q + ++E+V + +
Sbjct: 50 NAETISLEYDVSNNTEFSLCKLGCNSHEYTDLNLAAFRYGQLAYQKILTTVEDVPTRGTV 109
Query: 97 LN 98
LN
Sbjct: 110 LN 111
>U80448-6|AAO12417.1| 687|Caenorhabditis elegans Hypothetical
protein F59A3.2b protein.
Length = 687
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 88 ENVTEKEALLN--KTMGYVENLIDNVLNYERIKIIDG 122
E+ +E LN + +V +IDNVLN +++KI DG
Sbjct: 356 ESSYNREMTLNDDRIEQFVVKMIDNVLNTKKLKIFDG 392
>U80448-5|AAB37819.1| 975|Caenorhabditis elegans Hypothetical
protein F59A3.2a protein.
Length = 975
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 88 ENVTEKEALLN--KTMGYVENLIDNVLNYERIKIIDG 122
E+ +E LN + +V +IDNVLN +++KI DG
Sbjct: 356 ESSYNREMTLNDDRIEQFVVKMIDNVLNTKKLKIFDG 392
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 80 LQDFIRSLENVTEKEALLNKTMG-YVENLIDNVLNYERIK-IIDGVEIKIKNDTKVVDKE 137
+ + +L+ K A L KT V +L D ++ ER + +E K K K++D+
Sbjct: 1409 INELQEALDAANSKNASLEKTKSRLVGDLDDAQVDVERANGVASALEKKQKGFDKIIDEW 1468
Query: 138 RKENNDI 144
RK+ +D+
Sbjct: 1469 RKKTDDL 1475
>AF200199-1|AAF13716.1| 966|Caenorhabditis elegans MES-1 protein.
Length = 966
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 38 NCQDLSINEETKNNT-VDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEKEAL 96
N + +S+ + NNT + K C+S E +++N+ Q + ++E+V + +
Sbjct: 50 NAETISLEYDVSNNTEFSLCKLGCNSHEYTDLNLAAFRYGQLAYQKILTTVEDVPTRGTV 109
Query: 97 LN 98
LN
Sbjct: 110 LN 111
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 9.5
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 41 DLSINEETKNNTVDINKSDCHSTESSNINVLVSDKAPSTLQDFIRSLENVTEK-EALLNK 99
D + ++++ N D + D + SN+ V + LQD ++ + V EK EA L +
Sbjct: 1287 DAKVEQKSEENWGDWGEDDAEAATESNVVVSTLQSTVAELQDRLKFQKEVIEKAEAELIE 1346
Query: 100 TMGYVENL 107
T + L
Sbjct: 1347 TQEKYDEL 1354
>U88169-12|AAB42231.1| 419|Caenorhabditis elegans Hypothetical
protein T03F1.1 protein.
Length = 419
Score = 28.7 bits (61), Expect = 9.5
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Query: 344 LLSRLDGIFARLGLAPSENAVTDSPQMGGQSLSDMKLEACREQLICLMYANPAKYAPYSN 403
L+SRLDG RLG ++ + S + K A Q I + A PYS
Sbjct: 9 LVSRLDGALNRLGNVKKDHPLESS--SNSKPTHQPKSPAPYRQKIEKLSAEVVDSNPYSR 66
Query: 404 LVSAQLSRELNELRR 418
L++ Q +NE R
Sbjct: 67 LMALQRMGIVNEYER 81
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.133 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,167,517
Number of Sequences: 27539
Number of extensions: 544757
Number of successful extensions: 1718
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1709
Number of HSP's gapped (non-prelim): 28
length of query: 479
length of database: 12,573,161
effective HSP length: 84
effective length of query: 395
effective length of database: 10,259,885
effective search space: 4052654575
effective search space used: 4052654575
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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