Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000024-TA|BGIBMGA000024-PA|IPR003254|Insect immunity
protein and cecropin, IPR000875|Cecropin
         (63 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    20   2.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   5.1  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 2.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 2   NFAKILSFVFALVLALSM 19
           NF K L F+F  +  L++
Sbjct: 440 NFRKKLDFIFTFITLLTI 457


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 18.6 bits (36), Expect = 5.1
 Identities = 10/38 (26%), Positives = 16/38 (42%)

Query: 13  LVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIVKAGP 50
           L +  +  S  P P   IF +   +  N  D ++K  P
Sbjct: 149 LAVKTTSKSLVPTPVTHIFLQNLILKENTYDAVIKWSP 186


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.137    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,395
Number of Sequences: 317
Number of extensions: 270
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 63
length of database: 114,650
effective HSP length: 43
effective length of query: 20
effective length of database: 101,019
effective search space:  2020380
effective search space used:  2020380
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.7 bits)
S2: 34 (17.8 bits)