GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000022-TA|BGIBMGA000022-PA|IPR007087|Zinc finger,
C2H2-type
         (199 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1DHS9 Cluster: Predicted protein; n=5; Trichocomaceae|...    36   0.50 
UniRef50_Q4Q498 Cluster: Putative uncharacterized protein; n=3; ...    35   1.1  
UniRef50_Q16M84 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_Q6E7H0 Cluster: Origin recognition complex protein 3; n...    34   2.7  
UniRef50_Q0U9A7 Cluster: Predicted protein; n=1; Phaeosphaeria n...    33   4.6  

>UniRef50_A1DHS9 Cluster: Predicted protein; n=5;
           Trichocomaceae|Rep: Predicted protein - Neosartorya
           fischeri (strain ATCC 1020 / DSM 3700 / NRRL
           181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
           3700 / NRRL 181))
          Length = 1007

 Score = 36.3 bits (80), Expect = 0.50
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 11/100 (11%)

Query: 36  VRESQYLLQVVKCDDQKCCSPRRS---DLHMILHDRFLPPPYPITQVDGHLTIPDFQEHD 92
           VR     ++V K   Q+    ++S   DLH +L + F    YP+T     L +  F    
Sbjct: 801 VRTFSSRMEVEKKRQQRDAQRQKSTVRDLHKVLSEGFF---YPLTARFA-LMMTQFSSST 856

Query: 93  GKSFAPFLIHH--CLPIQPLNAFISTL--YDLYYPSVRDD 128
             S+ PFLI H  CL IQ L   +ST+  ++ Y P++  +
Sbjct: 857 APSYNPFLIPHLLCLFIQTLTLILSTMGPHNPYLPNLTQE 896


>UniRef50_Q4Q498 Cluster: Putative uncharacterized protein; n=3;
           Leishmania|Rep: Putative uncharacterized protein -
           Leishmania major
          Length = 548

 Score = 35.1 bits (77), Expect = 1.1
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 5/60 (8%)

Query: 129 LGKRC-CSTCGIYFASSTRAAEHRRSAH---IAPAKQAHMFRKVRPSRI-VTRRANVLLC 183
           L +RC C  CG++ +S +     +  A    +A  K+  + R++RPSR+ +TRR  +L C
Sbjct: 151 LVRRCWCPRCGVWLSSGSAPKPSKLKASRTTLATIKECRVRRQLRPSRLSITRRRFMLCC 210


>UniRef50_Q16M84 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 661

 Score = 34.7 bits (76), Expect = 1.5
 Identities = 29/96 (30%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 71  PPPYPITQVDGHLTIPDFQEHDGKSFAPFLIHHCLPIQPLNAFISTLYDL-YYPSVRDDL 129
           PPP      DG     D+Q  D +           P  P  + IS++ D   Y  V  D 
Sbjct: 248 PPP-----TDGQDVEVDYQMADNEMERKTHGQRFSPKLPDQSLISSVEDYDQYQIVHVDN 302

Query: 130 GKRCCSTCGIYFASSTRAAEHRRSAHIAPAKQAHMF 165
            +RCC  CGIYF S      H    H +  + A  F
Sbjct: 303 AERCCG-CGIYFESFELLMNHAHLEHQSKLENAEEF 337


>UniRef50_Q6E7H0 Cluster: Origin recognition complex protein 3; n=4;
           core eudicotyledons|Rep: Origin recognition complex
           protein 3 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 734

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 5/71 (7%)

Query: 3   CIDGHEVVAEYIDPNNDTSSVPDLPAEEWYTEHVRESQYLLQVVKCDDQKCCSPRRSDLH 62
           C+ G  ++ +++ P  D + V  L +  WY E+      ++ +V  D ++CC P  SDL 
Sbjct: 202 CLRG--LLRQFVMPTVDVADVTILAS--WYRENKNHENPVVIIVD-DTERCCGPVLSDLI 256

Query: 63  MILHDRFLPPP 73
           +IL +  +  P
Sbjct: 257 LILSEWAIKVP 267


>UniRef50_Q0U9A7 Cluster: Predicted protein; n=1; Phaeosphaeria
           nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
           (Septoria nodorum)
          Length = 553

 Score = 33.1 bits (72), Expect = 4.6
 Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 107 IQPLNAFISTLY--DLYYPSVRDDLGKRCCSTCGIYFASSTRAAEHRRSA-HIAPAKQAH 163
           ++PL+  + T+Y  D+    +   L   CCS    YFA    + E+R +   IAPA  A+
Sbjct: 331 LKPLSGPLITIYIGDIELTGIFKRLAMACCSVLSKYFAEFPESLEYRFAPDSIAPAAVAY 390

Query: 164 MFRK 167
           +  K
Sbjct: 391 LLTK 394


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.323    0.138    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,427,913
Number of Sequences: 1657284
Number of extensions: 10034736
Number of successful extensions: 22174
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 22174
Number of HSP's gapped (non-prelim): 5
length of query: 199
length of database: 575,637,011
effective HSP length: 97
effective length of query: 102
effective length of database: 414,880,463
effective search space: 42317807226
effective search space used: 42317807226
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 70 (32.3 bits)