BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA000022-TA|BGIBMGA000022-PA|IPR007087|Zinc finger,
C2H2-type
(199 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023899-1|ABA81833.1| 598|Drosophila melanogaster LP13385p pro... 31 1.4
AY061147-1|AAL28695.1| 336|Drosophila melanogaster LD12131p pro... 31 1.4
AE014298-1128|AAF46327.1| 598|Drosophila melanogaster CG2116-PA... 31 1.4
AY069474-1|AAL39619.1| 652|Drosophila melanogaster LD21421p pro... 30 2.5
AE013599-2251|AAF58014.2| 652|Drosophila melanogaster CG4282-PA... 30 2.5
AE014297-298|AAF51994.3| 448|Drosophila melanogaster CG1427-PA,... 29 3.3
AY095010-1|AAM11338.1| 547|Drosophila melanogaster GH17891p pro... 29 4.3
AF367369-1|AAK52961.1| 547|Drosophila melanogaster amidophospho... 29 4.3
AE014296-1160|AAF50639.2| 470|Drosophila melanogaster CG10078-P... 29 4.3
AE014296-1159|AAF50638.3| 547|Drosophila melanogaster CG10078-P... 29 4.3
AY095530-1|AAM12261.1| 1079|Drosophila melanogaster RE37107p pro... 28 7.6
AY069466-1|AAL39611.1| 617|Drosophila melanogaster LD20554p pro... 28 7.6
AE014296-2770|AAF49437.2| 1079|Drosophila melanogaster CG32164-P... 28 7.6
AE014296-2768|AAG22314.2| 1080|Drosophila melanogaster CG32165-P... 28 7.6
Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein. 28 10.0
M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein p... 28 10.0
D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein. 28 10.0
BT024322-1|ABC86384.1| 534|Drosophila melanogaster IP10964p pro... 28 10.0
BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p pro... 28 10.0
AY060680-1|AAL28228.1| 598|Drosophila melanogaster GH11848p pro... 28 10.0
AY051681-1|AAK93105.1| 777|Drosophila melanogaster LD23102p pro... 28 10.0
AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain ... 28 10.0
AE014298-1643|AAF48063.1| 544|Drosophila melanogaster CG11695-P... 28 10.0
AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-P... 28 10.0
AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-P... 28 10.0
AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-P... 28 10.0
AE014134-1687|AAF52805.2| 777|Drosophila melanogaster CG3998-PA... 28 10.0
>BT023899-1|ABA81833.1| 598|Drosophila melanogaster LP13385p
protein.
Length = 598
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 113 FISTLYDLYYPSVRDDLGKR-CCSTCGIYFASSTRAAEHRRSAH 155
+ ST DL + R L K C CG FA +T+ HR + H
Sbjct: 319 YFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNTQLKRHREATH 362
>AY061147-1|AAL28695.1| 336|Drosophila melanogaster LD12131p
protein.
Length = 336
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 113 FISTLYDLYYPSVRDDLGKR-CCSTCGIYFASSTRAAEHRRSAH 155
+ ST DL + R L K C CG FA +T+ HR + H
Sbjct: 57 YFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNTQLKRHREATH 100
>AE014298-1128|AAF46327.1| 598|Drosophila melanogaster CG2116-PA
protein.
Length = 598
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 113 FISTLYDLYYPSVRDDLGKR-CCSTCGIYFASSTRAAEHRRSAH 155
+ ST DL + R L K C CG FA +T+ HR + H
Sbjct: 319 YFSTKQDLRVHNQRRHLEKEHICEVCGKTFAQNTQLKRHREATH 362
>AY069474-1|AAL39619.1| 652|Drosophila melanogaster LD21421p
protein.
Length = 652
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 134 CSTCGIYFASSTRAAEHRRSAHIAPA--KQAHMFRKVRPSRIVTRR 177
C CG + T +H +S H+ A + H+ KV P+ RR
Sbjct: 511 CQICGAWLKGMTGLKQHMKSIHVESAGEHRCHICAKVSPNARALRR 556
>AE013599-2251|AAF58014.2| 652|Drosophila melanogaster CG4282-PA
protein.
Length = 652
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Query: 134 CSTCGIYFASSTRAAEHRRSAHIAPA--KQAHMFRKVRPSRIVTRR 177
C CG + T +H +S H+ A + H+ KV P+ RR
Sbjct: 511 CQICGAWLKGMTGLKQHMKSIHVESAGEHRCHICAKVSPNARALRR 556
>AE014297-298|AAF51994.3| 448|Drosophila melanogaster CG1427-PA,
isoform A protein.
Length = 448
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 4 IDGHEVVAEY-IDPNNDTSSVPDLPAEEW 31
IDGHE + ++ + P SSVPD W
Sbjct: 414 IDGHEFLGKFRLPPQQPASSVPDCSGRNW 442
>AY095010-1|AAM11338.1| 547|Drosophila melanogaster GH17891p
protein.
Length = 547
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 87 DFQEHDGKSFAPFLIHHCLPIQPLNAFISTLYDLYYPSVRDDLGKR 132
D EHDG ++ P I H + + PL+ + ++ +VRD G R
Sbjct: 206 DVSEHDGPNW-PARIRHFMTLAPLSYSLVVMHKDKIYAVRDSYGNR 250
>AF367369-1|AAK52961.1| 547|Drosophila melanogaster
amidophosphoribosyltransferase protein.
Length = 547
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 87 DFQEHDGKSFAPFLIHHCLPIQPLNAFISTLYDLYYPSVRDDLGKR 132
D EHDG ++ P I H + + PL+ + ++ +VRD G R
Sbjct: 206 DVSEHDGPNW-PARIRHFMTLAPLSYSLVVMHKDKIYAVRDSYGNR 250
>AE014296-1160|AAF50639.2| 470|Drosophila melanogaster CG10078-PA,
isoform A protein.
Length = 470
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 87 DFQEHDGKSFAPFLIHHCLPIQPLNAFISTLYDLYYPSVRDDLGKR 132
D EHDG ++ P I H + + PL+ + ++ +VRD G R
Sbjct: 129 DVSEHDGPNW-PARIRHFMTLAPLSYSLVVMHKDKIYAVRDSYGNR 173
>AE014296-1159|AAF50638.3| 547|Drosophila melanogaster CG10078-PB,
isoform B protein.
Length = 547
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 87 DFQEHDGKSFAPFLIHHCLPIQPLNAFISTLYDLYYPSVRDDLGKR 132
D EHDG ++ P I H + + PL+ + ++ +VRD G R
Sbjct: 206 DVSEHDGPNW-PARIRHFMTLAPLSYSLVVMHKDKIYAVRDSYGNR 250
>AY095530-1|AAM12261.1| 1079|Drosophila melanogaster RE37107p
protein.
Length = 1079
Score = 28.3 bits (60), Expect = 7.6
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 74 YPITQVDGHLTIPDFQEHDGKSFAPFLIHHCLPIQPLNAFISTLYDLYYPSVRDDLGKRC 133
Y + + + L++ +F H G +FAP+L +AF + + +P + D+ C
Sbjct: 675 YIVEKEEAILSLKEFATHTGAAFAPYL---------QSAFENVYKMIDHP--QGDVRMAC 723
Query: 134 C-STCGIYFA--SSTRAAEHRRSAHIAPAKQAHMFRKVRPSRIVTRRANVL 181
S C A AA +R+ IA K AH+ R +V R +VL
Sbjct: 724 IDSICSFITALHKLDDAAGLKRACEIAIPKFAHIMRTDDQVAVVLRMLDVL 774
>AY069466-1|AAL39611.1| 617|Drosophila melanogaster LD20554p
protein.
Length = 617
Score = 28.3 bits (60), Expect = 7.6
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 74 YPITQVDGHLTIPDFQEHDGKSFAPFLIHHCLPIQPLNAFISTLYDLYYPSVRDDLGKRC 133
Y + + + L++ +F H G +FAP+L +AF + + +P + D+ C
Sbjct: 213 YIVEKEEAILSLKEFATHTGAAFAPYL---------QSAFENVYKMIDHP--QGDVRMAC 261
Query: 134 C-STCGIYFA--SSTRAAEHRRSAHIAPAKQAHMFRKVRPSRIVTRRANVL 181
S C A AA +R+ IA K AH+ R +V R +VL
Sbjct: 262 IDSICSFITALHKLDDAAGLKRACEIAIPKFAHIMRTDDQVAVVLRMLDVL 312
>AE014296-2770|AAF49437.2| 1079|Drosophila melanogaster CG32164-PA
protein.
Length = 1079
Score = 28.3 bits (60), Expect = 7.6
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 74 YPITQVDGHLTIPDFQEHDGKSFAPFLIHHCLPIQPLNAFISTLYDLYYPSVRDDLGKRC 133
Y + + + L++ +F H G +FAP+L +AF + + +P + D+ C
Sbjct: 675 YIVEKEEAILSLKEFATHTGAAFAPYL---------QSAFENVYKMIDHP--QGDVRMAC 723
Query: 134 C-STCGIYFA--SSTRAAEHRRSAHIAPAKQAHMFRKVRPSRIVTRRANVL 181
S C A AA +R+ IA K AH+ R +V R +VL
Sbjct: 724 IDSICSFITALHKLDDAAGLKRACEIAIPKFAHIMRTDDQVAVVLRMLDVL 774
>AE014296-2768|AAG22314.2| 1080|Drosophila melanogaster CG32165-PA
protein.
Length = 1080
Score = 28.3 bits (60), Expect = 7.6
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 74 YPITQVDGHLTIPDFQEHDGKSFAPFLIHHCLPIQPLNAFISTLYDLYYPSVRDDLGKRC 133
Y + + + L++ +F H G +FAP+L +AF + + +P + D+ C
Sbjct: 676 YIVEKEEAILSLKEFATHTGAAFAPYL---------QSAFENVYKMIDHP--QGDVRMAC 724
Query: 134 C-STCGIYFA--SSTRAAEHRRSAHIAPAKQAHMFRKVRPSRIVTRRANVL 181
S C A AA +R+ IA K AH+ R +V R +VL
Sbjct: 725 IDSICSFITALHKLDDAAGLKRACEIAIPKFAHIMRTDDQVAVVLRMLDVL 775
>Z11743-1|CAA77802.1| 1403|Drosophila melanogaster prospero protein.
Length = 1403
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 55 SPRRSDLHMILHDRFLPPPYPITQVD--GHLTIPDFQEHDGKSFAPF 99
SP RS H + PPP P+ V + IP+ H+ K F+P+
Sbjct: 1062 SPTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPSLHESKVFSPY 1108
>M81389-1|AAA28841.1| 1407|Drosophila melanogaster Pros protein
protein.
Length = 1407
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 55 SPRRSDLHMILHDRFLPPPYPITQVD--GHLTIPDFQEHDGKSFAPF 99
SP RS H + PPP P+ V + IP+ H+ K F+P+
Sbjct: 1066 SPTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPSLHESKVFSPY 1112
>D10609-1|BAA01464.1| 1403|Drosophila melanogaster prospero protein.
Length = 1403
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 55 SPRRSDLHMILHDRFLPPPYPITQVD--GHLTIPDFQEHDGKSFAPF 99
SP RS H + PPP P+ V + IP+ H+ K F+P+
Sbjct: 1062 SPTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPSLHESKVFSPY 1108
>BT024322-1|ABC86384.1| 534|Drosophila melanogaster IP10964p
protein.
Length = 534
Score = 27.9 bits (59), Expect = 10.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
Query: 56 PRRSDLHMILHDRFLPPPYPITQVDGHLTIPDFQEHDGK-SFAPFLIHHCLPIQPLNAFI 114
P+R +++ R LP I +VD + + Q D S A L+H+CL +QP +A +
Sbjct: 198 PQRLQEELLIQPRHLP----IKEVDALRLLAEAQIKDQNYSEALPLLHNCLKLQPHDARV 253
Query: 115 STLY 118
L+
Sbjct: 254 LRLW 257
>BT015263-1|AAT94492.1| 1374|Drosophila melanogaster LD37627p protein.
Length = 1374
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 55 SPRRSDLHMILHDRFLPPPYPITQVD--GHLTIPDFQEHDGKSFAPF 99
SP RS H + PPP P+ V + IP+ H+ K F+P+
Sbjct: 1062 SPTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPSLHESKVFSPY 1108
>AY060680-1|AAL28228.1| 598|Drosophila melanogaster GH11848p
protein.
Length = 598
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 55 SPRRSDLHMILHDRFLPPPYPITQVD--GHLTIPDFQEHDGKSFAPF 99
SP RS H + PPP P+ V + IP+ H+ K F+P+
Sbjct: 451 SPTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPSLHESKVFSPY 497
>AY051681-1|AAK93105.1| 777|Drosophila melanogaster LD23102p
protein.
Length = 777
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 132 RCCSTCGIYFASSTRAAEHRRSAH 155
+C C ++FA+ +A EH R+ H
Sbjct: 482 KCPCYCNLFFATKEQATEHARAQH 505
>AF190403-1|AAF05703.1| 1403|Drosophila melanogaster homeodomain
transcription factorProspero protein.
Length = 1403
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 55 SPRRSDLHMILHDRFLPPPYPITQVD--GHLTIPDFQEHDGKSFAPF 99
SP RS H + PPP P+ V + IP+ H+ K F+P+
Sbjct: 1062 SPTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPSLHESKVFSPY 1108
>AE014298-1643|AAF48063.1| 544|Drosophila melanogaster CG11695-PA
protein.
Length = 544
Score = 27.9 bits (59), Expect = 10.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Query: 134 CSTCGIYFASSTRAAEHRRSAHIAPAKQAHMFRKVRPSR 172
C+ C F +S +HRR H A +KV PS+
Sbjct: 476 CAFCERTFKNSGNMHKHRRQMHAAQVAALQQQKKVPPSK 514
>AE014297-1287|AAN13500.2| 1374|Drosophila melanogaster CG17228-PD,
isoform D protein.
Length = 1374
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 55 SPRRSDLHMILHDRFLPPPYPITQVD--GHLTIPDFQEHDGKSFAPF 99
SP RS H + PPP P+ V + IP+ H+ K F+P+
Sbjct: 1062 SPTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPSLHESKVFSPY 1108
>AE014297-1286|AAF54628.2| 1403|Drosophila melanogaster CG17228-PC,
isoform C protein.
Length = 1403
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 55 SPRRSDLHMILHDRFLPPPYPITQVD--GHLTIPDFQEHDGKSFAPF 99
SP RS H + PPP P+ V + IP+ H+ K F+P+
Sbjct: 1062 SPTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPSLHESKVFSPY 1108
>AE014297-1285|AAN13501.2| 1535|Drosophila melanogaster CG17228-PA,
isoform A protein.
Length = 1535
Score = 27.9 bits (59), Expect = 10.0
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 55 SPRRSDLHMILHDRFLPPPYPITQVD--GHLTIPDFQEHDGKSFAPF 99
SP RS H + PPP P+ V + IP+ H+ K F+P+
Sbjct: 1223 SPTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPSLHESKVFSPY 1269
>AE014134-1687|AAF52805.2| 777|Drosophila melanogaster CG3998-PA
protein.
Length = 777
Score = 27.9 bits (59), Expect = 10.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 132 RCCSTCGIYFASSTRAAEHRRSAH 155
+C C ++FA+ +A EH R+ H
Sbjct: 482 KCPCYCNLFFATKEQATEHARAQH 505
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.323 0.138 0.444
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,197,965
Number of Sequences: 52641
Number of extensions: 492168
Number of successful extensions: 1465
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1453
Number of HSP's gapped (non-prelim): 36
length of query: 199
length of database: 24,830,863
effective HSP length: 81
effective length of query: 118
effective length of database: 20,566,942
effective search space: 2426899156
effective search space used: 2426899156
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 59 (27.9 bits)
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