Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000020-TA|BGIBMGA000020-PA|IPR000875|Cecropin
         (63 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB prot...    23   0.79 

>AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB
          protein.
          Length = 60

 Score = 23.4 bits (48), Expect = 0.79
 Identities = 14/42 (33%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 1  MNFVKILCVVXXXXXXXXXXX-XXXEPKRKVFKIIEKIGRNV 41
          MNF K+  +V                P+ K  K +EK+GRNV
Sbjct: 1  MNFTKLFILVAIAVLVVVGVQPVDGAPRWKFGKRLEKLGRNV 42


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.332    0.149    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,745
Number of Sequences: 2123
Number of extensions: 436
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1
length of query: 63
length of database: 516,269
effective HSP length: 42
effective length of query: 21
effective length of database: 427,103
effective search space:  8969163
effective search space used:  8969163
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (21.4 bits)
S2: 39 (19.8 bits)