GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000020-TA|BGIBMGA000020-PA|IPR000875|Cecropin
         (63 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04142 Cluster: Cecropin-B precursor; n=16; Obtectomera...    45   3e-04
UniRef50_P01507 Cluster: Cecropin-A precursor; n=17; Ditrysia|Re...    40   0.007
UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella xylostella|Re...    32   1.9  

>UniRef50_P04142 Cluster: Cecropin-B precursor; n=16;
          Obtectomera|Rep: Cecropin-B precursor - Bombyx mori
          (Silk moth)
          Length = 63

 Score = 45.2 bits (102), Expect = 3e-04
 Identities = 20/46 (43%), Positives = 26/46 (56%)

Query: 1  MNFVKILCVVXXXXXXXXXXXXXXEPKRKVFKIIEKIGRNVRGGVI 46
          MNF KIL  V              EP+ K+FK IEK+GRN+R G++
Sbjct: 1  MNFAKILSFVFALVLALSMTSAAPEPRWKIFKKIEKMGRNIRDGIV 46


>UniRef50_P01507 Cluster: Cecropin-A precursor; n=17;
          Ditrysia|Rep: Cecropin-A precursor - Hyalophora
          cecropia (Cecropia moth)
          Length = 64

 Score = 40.3 bits (90), Expect = 0.007
 Identities = 19/46 (41%), Positives = 25/46 (54%)

Query: 1  MNFVKILCVVXXXXXXXXXXXXXXEPKRKVFKIIEKIGRNVRGGVI 46
          MNF +I   V              EPK K+FK IEK+G+N+R G+I
Sbjct: 1  MNFSRIFFFVFACLTALAMVNAAPEPKWKLFKKIEKVGQNIRDGII 46


>UniRef50_A6BMG0 Cluster: Cecropin A; n=1; Plutella
          xylostella|Rep: Cecropin A - Plutella xylostella
          (Diamondback moth)
          Length = 66

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 12/21 (57%), Positives = 17/21 (80%)

Query: 26 PKRKVFKIIEKIGRNVRGGVI 46
          P+ K FK +EK+GRN+R G+I
Sbjct: 24 PRWKPFKKLEKVGRNIRNGII 44


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.332    0.149    0.430 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,581,708
Number of Sequences: 1657284
Number of extensions: 494983
Number of successful extensions: 605
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 602
Number of HSP's gapped (non-prelim): 3
length of query: 63
length of database: 575,637,011
effective HSP length: 43
effective length of query: 20
effective length of database: 504,373,799
effective search space: 10087475980
effective search space used: 10087475980
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.9 bits)
S2: 65 (30.3 bits)