GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA000018-TA|BGIBMGA000018-PA|IPR000875|Cecropin,
IPR003254|Insect immunity protein and cecropin
         (59 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    19   4.7  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    19   4.7  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 7/15 (46%), Positives = 8/15 (53%)

Query: 15  FATASAKPWNFFKEI 29
           F T   + WN F EI
Sbjct: 93  FTTNEPEKWNHFVEI 107


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 19.0 bits (37), Expect = 4.7
 Identities = 7/15 (46%), Positives = 8/15 (53%)

Query: 15  FATASAKPWNFFKEI 29
           F T   + WN F EI
Sbjct: 93  FTTNEPEKWNHFVEI 107


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.338    0.143    0.439 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8523
Number of Sequences: 429
Number of extensions: 128
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of query: 59
length of database: 140,377
effective HSP length: 39
effective length of query: 20
effective length of database: 123,646
effective search space:  2472920
effective search space used:  2472920
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.9 bits)
S2: 35 (18.2 bits)